Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30811 Davidia involucrata HOM05D005736 ORTHO05D007215 3.2e-164 581.6 281 100.0
Hma1.2p1_1292F.1_g273760 Hydrangea macrophylla HOM05D005736 ORTHO05D007215 4.3e-145 518.1 308 80.2
CSS0016231 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 3.0e-138 495.4 308 76.6
CSS0007199 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 1.9e-137 492.7 308 76.3
GSVIVG01031141001 Vitis vinifera HOM05D005736 ORTHO05D007215 2.2e-133 479.2 297 76.4
PGR031G0613 Punica granatum HOM05D005736 ORTHO05D007215 3.8e-133 478.4 309 74.1
Glyma.19G233300 Glycine max HOM05D005736 ORTHO05D007215 8.4e-133 477.2 308 73.4
TAR633G1366 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.4e-132 476.5 309 74.4
CiPaw.07G021500 Carya illinoinensis HOM05D005736 ORTHO05D007215 7.1e-132 474.2 306 73.5
Thecc.05G313100 Theobroma cacao HOM05D005736 ORTHO05D007215 9.3e-132 473.8 301 74.8
Duzib106G0969 Durio zibethinus HOM05D005736 ORTHO05D007215 1.2e-131 473.4 301 74.1
Haze_04138 Corylus avellana HOM05D005736 ORTHO05D007215 3.5e-131 471.9 301 73.4
Glyma.03G235500 Glycine max HOM05D005736 ORTHO05D007215 7.9e-131 470.7 304 72.7
Lalb_Chr15g0077351 Lupinus albus HOM05D005736 ORTHO05D007215 7.9e-131 470.7 299 74.2
TWI36G0679 Tripterygium wilfordii HOM05D005736 ORTHO05D007215 1.3e-130 469.9 302 73.8
DCAR_003356 Daucus carota HOM05D005736 ORTHO05D007215 2.3e-130 469.2 308 72.7
Aqoxy5G00736 Aquilegia oxysepala HOM05D005736 ORTHO05D007215 3.9e-130 468.4 313 70.9
Medtr7g112700 Medicago truncatula HOM05D005736 ORTHO05D007215 8.7e-130 467.2 304 72.0
COL.COLO4_10521 Corchorus olitorius HOM05D005736 ORTHO05D007215 1.9e-129 466.1 301 74.1
QL03p020205 Quercus lobata HOM05D005736 ORTHO05D007215 1.9e-129 466.1 300 74.0
MD12G1212900 Malus domestica HOM05D005736 ORTHO05D007215 3.3e-129 465.3 308 71.8
Lj1g0012360 Lotus japonicus HOM05D005736 ORTHO05D007215 7.4e-129 464.2 305 70.2
CANSAT54G0716 Cannabis sativa HOM05D005736 ORTHO05D007215 1.6e-128 463.0 301 71.4
Lsat_1_v5_gn_7_69261 Lactuca sativa HOM05D005736 ORTHO05D007215 2.1e-128 462.6 308 71.1
Cc02_g34150 Coffea canephora HOM05D005736 ORTHO05D007215 2.8e-128 462.2 305 71.5
Peaxi162Scf00037g01216 Petunia axillaris HOM05D005736 ORTHO05D007215 4.8e-128 461.5 303 72.6
Gohir.D11G277900 Gossypium hirsutum HOM05D005736 ORTHO05D007215 6.2e-128 461.1 301 72.8
Gorai.007G300100 Gossypium raimondii HOM05D005736 ORTHO05D007215 6.2e-128 461.1 301 72.8
TAR362G0909 Trochodendron aralioides HOM05D005736 ORTHO05D007215 6.2e-128 461.1 305 73.1
ClCG02G015270 Citrullus lanatus HOM05D005736 ORTHO05D007215 1.1e-127 460.3 301 72.1
Potri.013G017000 Populus trichocarpa HOM05D005736 ORTHO05D007215 1.4e-127 459.9 301 71.8
RcHm_v2.0_Chr3g0455751 Rosa chinensis HOM05D005736 ORTHO05D007215 1.4e-127 459.9 308 71.8
Prupe.6G320500 Prunus persica HOM05D005736 ORTHO05D007215 2.4e-127 459.1 308 72.4
Sc09g0002940 Simmondsia chinensis HOM05D005736 ORTHO05D007215 2.4e-127 459.1 305 73.1
Gohir.A11G268000 Gossypium hirsutum HOM05D005736 ORTHO05D007215 5.3e-127 458.0 301 72.4
Nitab4.5_0003844g0030 Nicotiana tabacum HOM05D005736 ORTHO05D007215 6.9e-127 457.6 307 72.0
Phvul.006G089500 Phaseolus vulgaris HOM05D005736 ORTHO05D007215 1.2e-126 456.8 304 69.7
SGA_v2.0_scaffold196G40952 Striga asiatica HOM05D005736 ORTHO05D007215 1.2e-126 456.8 297 71.7
MD04G1200300 Malus domestica HOM05D005736 ORTHO05D007215 2.0e-126 456.1 310 70.6
Sabra13G0020000 Salix brachista HOM05D005736 ORTHO05D007215 2.0e-126 456.1 301 71.1
Sabra13G0015800 Salix brachista HOM05D005736 ORTHO05D007215 2.6e-126 455.7 301 71.1
arahy.Tifrunner.gnm1.ann1.7HV2PX Arachis hypogaea HOM05D005736 ORTHO05D007215 4.5e-126 454.9 305 70.8
TPR.G33191 Trifolium pratense HOM05D005736 ORTHO05D007215 7.6e-126 454.1 303 70.6
PSO210G0197 Papaver somniferum HOM05D005736 ORTHO05D007215 9.9e-126 453.8 305 71.1
Potri.005G025300 Populus trichocarpa HOM05D005736 ORTHO05D007215 9.9e-126 453.8 301 70.8
HanXRQChr16g0513361 Helianthus annuus HOM05D005736 ORTHO05D007215 1.3e-125 453.4 308 70.5
PGSC0003DMG400024712 Solanum tuberosum HOM05D005736 ORTHO05D007215 1.7e-125 453.0 300 71.7
ECA234G1428 Erigeron canadensis HOM05D005736 ORTHO05D007215 2.2e-125 452.6 298 70.8
Hund07098 Selenicereus undatus HOM05D005736 ORTHO05D007215 2.2e-125 452.6 308 68.8
CAN.G1459.12 Capsicum annuum HOM05D005736 ORTHO05D007215 3.8e-125 451.8 303 70.6
Oeu043344.1 Olea europaea HOM05D005736 ORTHO05D007215 3.8e-125 451.8 305 70.8
PSO832G2303 Papaver somniferum HOM05D005736 ORTHO05D007215 3.8e-125 451.8 305 70.8
Rhsim07G0188500 Rhododendron simsii HOM05D002832 ORTHO05D008667 3.8e-125 451.8 383 61.1
Sopen01g043240 Solanum pennellii HOM05D005736 ORTHO05D007215 4.9e-125 451.4 300 71.7
Atru.chr2.31 Acer truncatum HOM05D005736 ORTHO05D007215 8.4e-125 450.7 302 72.5
arahy.Tifrunner.gnm1.ann1.B5Q7D5 Arachis hypogaea HOM05D005736 ORTHO05D007215 1.1e-124 450.3 306 70.6
Ciclev10001982m.g Citrus clementina HOM05D005736 ORTHO05D007215 1.4e-124 449.9 302 71.2
Cfa006630 Carpinus fangiana HOM05D005736 ORTHO05D007215 1.9e-124 449.5 301 71.1
vmacro04813 Vaccinium macrocarpon HOM05D005736 ORTHO05D007215 3.2e-124 448.7 376 61.4
Sed0015517 Sechium edule HOM05D005736 ORTHO05D007215 5.5e-124 448.0 300 69.3
Solyc09g065950.3 Solanum lycopersicum HOM05D005736 ORTHO05D007215 9.3e-124 447.2 300 70.7
Ah.06g189800 Amaranthus hybridus HOM05D005736 ORTHO05D007215 1.2e-123 446.8 305 70.2
CsaV3_2G006740 Cucumis sativus L. HOM05D005736 ORTHO05D007215 2.1e-123 446.0 301 69.8
HanXRQChr10g0296691 Helianthus annuus HOM05D005736 ORTHO05D007215 2.7e-123 445.7 305 70.2
Nn3g21454 Nelumbo nucifera HOM05D005736 ORTHO05D007215 4.6e-123 444.9 304 68.1
Manes.09G170200 Manihot esculenta HOM05D005736 ORTHO05D007215 6.0e-123 444.5 305 70.5
FvH4_6g06571 Fragaria vesca HOM05D005736 ORTHO05D007215 1.8e-122 443.0 308 68.8
VMungo0540G0827 Vigna mungo HOM05D005736 ORTHO05D007215 1.8e-122 443.0 304 68.1
CDE02G3291 Ceratophyllum demersum HOM05D005736 ORTHO05D007215 2.5e-121 439.1 303 68.6
EL10Ac4g09914 Beta vulgaris HOM05D005736 ORTHO05D007215 4.3e-121 438.3 306 70.3
Migut.O00559 Erythranthe guttata HOM05D005736 ORTHO05D007215 5.6e-121 438.0 302 69.2
MSTRG.20415 Avicennia marina HOM05D005736 ORTHO05D007215 7.4e-121 437.6 302 68.9
ATR0796G081 Amborella trichopoda HOM05D005736 ORTHO05D007215 1.6e-120 436.4 308 66.9
Aa31LG5G15870 Aethionema arabicum HOM05D005736 ORTHO05D007215 4.8e-120 434.9 305 68.2
AUR62005207 Chenopodium quinoa HOM05D005736 ORTHO05D007215 6.2e-120 434.5 304 67.8
Migut.N02084 Erythranthe guttata HOM05D005736 ORTHO05D007215 1.4e-119 433.3 302 68.5
AL3G16120 Arabidopsis lyrata HOM05D005736 ORTHO05D007215 5.3e-119 431.4 305 67.5
THA.LOC104818718 Tarenaya hassleriana HOM05D005736 ORTHO05D007215 6.9e-119 431.0 304 66.8
AT3G05520 Arabidopsis thaliana HOM05D005736 ORTHO05D007215 2.0e-118 429.5 304 67.1
Carub.0003s0481 Capsella rubella HOM05D005736 ORTHO05D007215 2.6e-118 429.1 310 66.8
BcaB04g19260 Brassica carinata HOM05D005736 ORTHO05D007215 3.4e-118 428.7 305 67.2
Sp3g04350 Schrenkiella parvula HOM05D005736 ORTHO05D007215 3.4e-118 428.7 305 66.9
BraA03t12591Z Brassica rapa HOM05D005736 ORTHO05D007215 5.8e-118 427.9 308 66.6
FAN09G2204 Fragaria x ananassa HOM05D001134 ORTHO05D007215 1.0e-117 427.2 307 67.8
Gohir.A11G294600 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.0e-117 427.2 303 66.0
BNapus_Darmor_BZH_scaffold_114p00020 Brassica napus HOM05D005736 ORTHO05D007215 1.3e-117 426.8 303 66.3
C03p41560 Brassica napus HOM05D005736 ORTHO05D007215 1.3e-117 426.8 303 67.0
BcaB04g19261 Brassica carinata HOM05D005736 ORTHO05D007215 1.7e-117 426.4 305 67.2
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 1.7e-117 426.4 307 67.8
CARHR079910 Cardamine hirsuta HOM05D005736 ORTHO05D007215 2.2e-117 426.0 304 66.4
BraSC132t45500Z Brassica rapa HOM05D005736 ORTHO05D007215 2.9e-117 425.6 303 66.0
BolC3t16437H Brassica oleracea HOM05D005736 ORTHO05D007215 3.8e-117 425.2 304 66.1
A03p34170 Brassica napus HOM05D005736 ORTHO05D007215 8.4e-117 424.1 303 66.3
Thhalv10021069m.g Eutrema salsugineum HOM05D005736 ORTHO05D007215 5.5e-116 421.4 310 65.5
HPP92_002147 Vanilla planifolia HOM05D005736 ORTHO05D007215 7.1e-116 421.0 309 63.4
FAN02G0934 Fragaria x ananassa HOM05D005736 ORTHO05D007215 1.2e-115 420.2 344 61.3
Gorai.007G341300 Gossypium raimondii HOM05D005736 ORTHO05D007215 8.7e-114 414.1 327 61.5
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 2.8e-112 409.1 317 64.7
BolC1t05691H Brassica oleracea HOM05D005736 ORTHO05D007215 9.0e-111 404.1 310 63.2
Zm00001eb330450 Zea mays HOM05D005736 ORTHO05D007215 2.5e-108 396.0 297 61.3
MELO3C004216.2 Cucumis melo HOM05D005736 ORTHO05D007215 5.5e-108 394.8 301 64.1
Eucgr.H04534 Eucalyptus grandis HOM05D005736 ORTHO05D007215 2.5e-105 386.0 269 67.3
Zm00001eb111300 Zea mays HOM05D005736 ORTHO05D007215 4.8e-104 381.7 297 61.3
Cpa.g.sc48.100 Carica papaya HOM05D005736 ORTHO05D007215 5.5e-100 368.2 305 61.0
Psat3g011440 Pisum sativum HOM05D005736 ORTHO05D007215 5.5e-100 368.2 256 66.8
AUR62000762 Chenopodium quinoa HOM05D005736 ORTHO05D007215 2.0e-94 349.7 256 64.5
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 3.8e-93 345.5 265 61.9
Gohir.D11G309300 Gossypium hirsutum HOM05D005736 ORTHO05D007215 3.3e-89 332.4 238 65.5
Actinidia35560 Actinidia chinensis HOM05D002832 ORTHO05D008667 1.3e-85 320.5 265 63.0
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 2.9e-85 319.3 301 52.8
Mapoly0002s0253 Marchantia polymorpha HOM05D005736 ORTHO05D007215 5.5e-84 315.1 302 48.0
AagrBONN_evm.TU.Sc2ySwM_344.5036 Anthoceros agrestis HOM05D005736 ORTHO05D007215 2.8e-80 302.8 298 48.0
Os07g0414800 Oryza sativa ssp. japonica HOM05D005736 ORTHO05D007215 3.5e-78 295.8 216 65.3
RcHm_v2.0_Chr1g0327431 Rosa chinensis HOM05D005736 ORTHO05D007215 1.3e-77 293.9 201 69.7
SMO196G0013 Selaginella moellendorffii HOM05D005736 ORTHO05D007215 1.3e-77 293.9 291 50.2
unitig_48.g30289 Utricularia gibba HOM05D005736 ORTHO05D007215 7.5e-73 278.1 301 48.5
Nitab4.5_0018629g0010 Nicotiana tabacum HOM05D005736 ORTHO05D007215 1.1e-68 264.2 177 71.8
Sopen09g027740 Solanum pennellii HOM05D005736 ORTHO05D007215 4.2e-68 262.3 177 71.2
BcaC09g47830 Brassica carinata HOM05D005736 ORTHO05D007215 3.6e-67 259.2 206 60.2
Lj5A420T26 Lonicera japonica HOM05D005736 ORTHO05D007215 1.5e-60 237.3 178 65.7
Actinidia16813 Actinidia chinensis HOM05D005736 ORTHO05D007215 3.2e-55 219.5 129 80.6
Pp3c10_25170 Physcomitrium patens HOM05D005736 ORTHO05D007215 1.2e-54 217.6 237 43.9
RcHm_v2.0_Chr1g0322221 Rosa chinensis HOM05D005736 ORTHO05D007215 6.6e-53 211.8 181 60.2
Actinidia16814 Actinidia chinensis HOM05D005736 ORTHO05D007215 2.3e-50 203.4 107 87.9
RcHm_v2.0_Chr3g0465741 Rosa chinensis HOM05D005736 ORTHO05D007215 6.4e-48 195.3 143 64.3
RcHm_v2.0_Chr1g0322051 Rosa chinensis HOM05D005736 ORTHO05D007215 8.3e-48 194.9 141 66.0
BcaB04g21446 Brassica carinata HOM05D005736 ORTHO05D007215 4.1e-47 192.6 126 70.6
Pp3c20_23130 Physcomitrium patens HOM05D005736 ORTHO05D007215 1.1e-39 167.9 167 47.9
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 7.1e-39 165.2 109 74.3
RcHm_v2.0_Chr1g0322151 Rosa chinensis HOM05D005736 ORTHO05D007215 2.3e-37 160.2 111 69.4
BcaB05g23235 Brassica carinata HOM05D005736 ORTHO05D007215 1.9e-36 157.1 170 47.6
TAR636G3309 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.9e-36 157.1 105 70.5
MBI18_g08112_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 3.3e-36 156.4 118 63.6
TAR629G2822 Trochodendron aralioides HOM05D005736 ORTHO05D007215 5.6e-36 155.6 105 72.4
MBI18_g44147_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 8.1e-27 125.2 156 45.5
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 5.6e-20 102.4 76 59.2
MBI18_g08111_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 9.0e-18 95.1 52 76.9
EL10Ac5g11505 Beta vulgaris HOM05D005736 ORTHO05D026989 2.4e-07 60.5 79 41.8


User provided reference genes

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