Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 2.2e-163 578.9 308 100.0
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.9e-110 401.7 238 81.5
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 3.0e-107 392.5 252 76.6
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.5e-106 390.2 257 74.3
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 2.5e-106 389.4 290 66.2
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.6e-105 386.7 246 75.2
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 1.6e-105 386.7 296 65.9
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 2.1e-105 386.3 252 75.0
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 8.1e-105 384.4 252 74.2
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.1e-104 384.0 290 66.6
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 5.3e-104 381.7 247 74.9
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.2e-103 380.6 256 72.3
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 1.2e-103 380.6 253 72.7
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 3.4e-103 379.0 284 64.1
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 3.4e-103 379.0 239 75.7
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 3.4e-103 379.0 290 63.8
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 1.3e-102 377.1 242 74.4
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 2.9e-102 375.9 286 65.7
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 4.9e-102 375.2 256 71.1
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 6.4e-102 374.8 256 71.1
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.1e-101 374.0 286 64.3
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 4.2e-101 372.1 250 72.8
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 5.4e-101 371.7 248 72.6
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.2e-100 370.5 264 69.7
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.2e-100 370.5 254 70.5
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.6e-100 370.2 284 69.7
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 1.6e-100 370.2 254 70.9
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.3e-99 367.1 242 73.1
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.8e-99 366.7 253 70.8
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.8e-99 366.7 246 72.8
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 8.7e-99 364.4 258 68.2
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.1e-98 364.0 250 69.2
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.5e-98 363.6 252 70.6
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 1.9e-98 363.2 246 71.5
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 2.5e-98 362.8 247 70.4
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 4.3e-98 362.1 289 64.0
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 7.4e-98 361.3 251 68.1
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 7.4e-98 361.3 250 68.8
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 2.1e-97 359.8 249 67.9
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.1e-97 359.8 242 70.2
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 2.1e-97 359.8 284 61.6
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 2.8e-97 359.4 244 68.4
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 3.7e-97 359.0 284 60.9
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 6.2e-97 358.2 250 65.6
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 8.1e-97 357.8 238 70.2
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.1e-96 357.5 250 67.2
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.1e-96 357.5 246 68.3
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 1.8e-96 356.7 240 71.2
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 5.3e-96 355.1 243 70.0
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 5.3e-96 355.1 246 68.3
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 2.0e-95 353.2 243 69.1
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 3.4e-95 352.4 245 69.0
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 9.9e-95 350.9 249 65.1
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.7e-94 350.1 245 69.0
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 6.4e-94 348.2 295 59.0
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 6.4e-94 348.2 246 65.9
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 6.4e-94 348.2 284 60.6
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.4e-93 347.1 239 69.0
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.9e-93 346.7 249 65.1
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 3.2e-93 345.9 257 66.5
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 3.2e-93 345.9 249 67.1
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 4.2e-93 345.5 277 61.7
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 9.3e-93 344.4 248 66.1
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 2.1e-92 343.2 244 65.6
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 2.1e-92 343.2 249 65.9
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 2.7e-92 342.8 252 66.3
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 2.7e-92 342.8 246 65.9
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 3.5e-92 342.4 249 64.7
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 3.5e-92 342.4 241 68.9
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 4.6e-92 342.0 249 64.7
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 6.0e-92 341.7 244 65.2
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 1.0e-91 340.9 241 65.6
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.3e-91 340.5 240 67.9
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 3.9e-91 339.0 252 64.3
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 6.7e-91 338.2 245 66.5
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 8.7e-91 337.8 253 64.4
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 8.7e-91 337.8 249 67.9
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.1e-89 333.2 245 64.5
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 1.4e-88 330.5 246 65.9
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 6.9e-88 328.2 246 63.0
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 2.0e-87 326.6 289 61.6
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 2.6e-87 326.2 257 64.6
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.1e-85 320.9 244 63.5
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 1.9e-85 320.1 245 64.9
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 2.5e-85 319.7 248 61.7
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 3.2e-85 319.3 237 64.1
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 3.2e-85 319.3 248 61.7
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 5.5e-85 318.5 257 60.7
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 1.6e-84 317.0 227 66.1
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 1.0e-83 314.3 250 62.0
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 3.7e-81 305.8 251 60.6
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.7e-81 305.8 250 61.2
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.7e-81 305.8 250 61.2
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 8.2e-81 304.7 208 70.7
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 1.4e-80 303.9 157 88.5
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 3.1e-80 302.8 209 65.1
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 1.0e-78 297.7 174 75.3
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 9.4e-77 291.2 182 78.6
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 2.2e-73 280.0 258 57.0
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.8e-73 279.6 259 56.4
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 5.3e-72 275.4 284 51.4
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.1e-69 267.7 194 69.6
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 4.2e-69 265.8 245 54.3
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.2e-68 264.2 211 58.8
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.6e-68 263.8 186 69.4
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.7e-54 217.2 238 46.6
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.9e-53 213.8 259 43.6
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 8.0e-52 208.4 238 45.0
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 5.2e-51 205.7 196 53.1
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 9.7e-50 201.4 181 49.2
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 1.2e-47 194.5 160 56.2
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.1e-45 188.0 167 50.9
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 5.5e-45 185.7 272 40.1
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 5.9e-39 165.6 246 39.4
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 2.2e-33 147.1 134 60.4
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 8.9e-27 125.2 111 60.4
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 4.0e-19 99.8 117 47.9
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 9.2e-16 88.6 123 41.5
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 2.7e-15 87.0 61 63.9
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.5e-10 71.2 41 73.2
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 3.5e-07 60.1 45 57.8


User provided reference genes

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