Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30726 Davidia involucrata HOM05D005716 ORTHO05D014961 1.5e-40 169.1 88 100.0
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 9.9e-32 139.8 87 85.1
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 1.3e-31 139.4 66 93.9
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 2.9e-31 138.3 90 82.2
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 3.8e-31 137.9 93 78.5
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 1.1e-30 136.3 87 77.0
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 1.9e-30 135.6 66 93.9
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 1.9e-30 135.6 64 93.8
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 1.9e-30 135.6 64 93.8
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 3.2e-30 134.8 87 81.6
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 7.1e-30 133.7 95 77.9
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 1.2e-29 132.9 90 81.1
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 2.1e-29 132.1 92 75.0
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 2.1e-29 132.1 87 81.6
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 3.5e-29 131.3 87 80.5
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 4.6e-29 131.0 66 84.8
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 6.0e-29 130.6 62 93.5
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 6.0e-29 130.6 87 77.0
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 6.0e-29 130.6 69 84.1
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 7.9e-29 130.2 90 81.1
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 7.9e-29 130.2 98 74.5
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 1.3e-28 129.4 87 79.3
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 1.3e-28 129.4 92 79.3
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 1.8e-28 129.0 90 80.0
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 1.8e-28 129.0 87 82.8
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 3.0e-28 128.3 88 79.5
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 3.9e-28 127.9 91 79.1
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 5.1e-28 127.5 87 82.8
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 8.7e-28 126.7 94 75.5
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 1.1e-27 126.3 90 78.9
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 1.5e-27 125.9 63 90.5
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 1.5e-27 125.9 87 79.3
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 1.5e-27 125.9 59 94.9
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 1.5e-27 125.9 94 73.4
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 1.9e-27 125.6 87 75.9
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 2.5e-27 125.2 66 86.4
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 3.3e-27 124.8 64 85.9
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 3.3e-27 124.8 63 85.7
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 3.3e-27 124.8 87 72.4
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 3.3e-27 124.8 88 80.7
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 3.3e-27 124.8 65 83.1
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 4.3e-27 124.4 64 87.5
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 4.3e-27 124.4 64 87.5
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 4.3e-27 124.4 64 84.4
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 4.3e-27 124.4 60 90.0
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 5.6e-27 124.0 62 90.3
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 5.6e-27 124.0 58 91.4
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 5.6e-27 124.0 87 77.0
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 7.4e-27 123.6 60 90.0
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 7.4e-27 123.6 87 78.2
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 7.4e-27 123.6 62 88.7
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 7.4e-27 123.6 58 93.1
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 7.4e-27 123.6 87 79.3
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 1.3e-26 122.9 64 84.4
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 1.3e-26 122.9 93 74.2
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 1.6e-26 122.5 58 89.7
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.6e-26 122.5 58 89.7
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.6e-26 122.5 58 89.7
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 1.6e-26 122.5 87 80.5
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 1.6e-26 122.5 65 84.6
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 2.1e-26 122.1 65 84.6
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 2.8e-26 121.7 58 93.1
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 2.8e-26 121.7 68 79.4
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.8e-26 121.7 84 79.8
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.8e-26 121.7 84 79.8
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 3.7e-26 121.3 83 68.7
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 3.7e-26 121.3 65 84.6
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.7e-26 121.3 65 84.6
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.7e-26 121.3 65 84.6
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 3.7e-26 121.3 83 78.3
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 3.7e-26 121.3 64 82.8
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 6.2e-26 120.6 64 84.4
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 8.2e-26 120.2 58 89.7
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 1.1e-25 119.8 58 87.9
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 1.4e-25 119.4 68 77.9
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 1.4e-25 119.4 68 82.4
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 1.4e-25 119.4 68 82.4
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 1.8e-25 119.0 64 84.4
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 1.8e-25 119.0 66 86.4
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 2.4e-25 118.6 91 75.8
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 3.1e-25 118.2 66 81.8
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 4.0e-25 117.9 59 84.7
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 5.3e-25 117.5 58 89.7
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 6.9e-25 117.1 59 84.7
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 1.2e-24 116.3 104 67.3
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 1.2e-24 116.3 58 82.8
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 1.5e-24 115.9 58 91.4
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 2.0e-24 115.5 87 78.2
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 2.0e-24 115.5 58 87.9
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 2.6e-24 115.2 58 86.2
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 3.4e-24 114.8 58 89.7
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 2.2e-23 112.1 56 87.5
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 2.9e-23 111.7 59 84.7
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 3.8e-23 111.3 53 92.5
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 1.9e-22 109.0 62 72.6
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 1.9e-22 109.0 58 82.8
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 2.7e-21 105.1 57 78.9
C05p14270 Brassica napus HOM05D013073 ORTHO05D014961 3.3e-19 98.2 55 81.8
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 7.4e-19 97.1 66 66.7
C06p00300 Brassica napus HOM05D013073 ORTHO05D014961 9.7e-19 96.7 55 80.0
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 4.8e-18 94.4 53 79.2
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 8.2e-18 93.6 53 79.2
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 8.2e-18 93.6 59 71.2
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 1.5e-16 89.4 54 74.1
BcaC08g42818 Brassica carinata HOM05D013073 ORTHO05D014961 5.9e-16 87.4 50 80.0
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 5.9e-16 87.4 58 69.0
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 4.2e-14 81.3 58 67.2
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 2.3e-12 75.5 57 61.4
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 1.7e-10 69.3 37 81.1
C09p15390 Brassica napus HOM05D013073 ORTHO05D014961 5.0e-07 57.8 55 54.5


User provided reference genes

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