Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30673 Davidia involucrata HOM05D002969 ORTHO05D003308 0.0e+00 1313.5 662 100.0
Dinv34333 Davidia involucrata HOM05D002969 ORTHO05D003308 0.0e+00 1313.5 662 100.0
Actinidia32183 Actinidia chinensis HOM05D002969 ORTHO05D003308 1.7e-245 852.8 664 68.1
TAR626G1632 Trochodendron aralioides HOM05D002969 ORTHO05D003308 8.6e-229 797.3 666 64.1
Rhsim08G0238100 Rhododendron simsii HOM05D002969 ORTHO05D003308 8.1e-227 790.8 676 64.1
Lj7C292T8 Lonicera japonica HOM05D002969 ORTHO05D003308 5.8e-225 784.6 667 64.2
GSVIVG01016771001 Vitis vinifera HOM05D002969 ORTHO05D003308 6.4e-224 781.2 669 63.2
CSS0043728 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 4.9e-216 755.0 664 64.5
Haze_16025 Corylus avellana HOM05D002969 ORTHO05D003308 1.1e-207 727.2 716 57.3
Nn7g36584 Nelumbo nucifera HOM05D002969 ORTHO05D003308 9.3e-207 724.2 671 59.8
RcHm_v2.0_Chr2g0145161 Rosa chinensis HOM05D002969 ORTHO05D003308 2.5e-204 716.1 663 59.4
Prupe.3G042500 Prunus persica HOM05D002969 ORTHO05D003308 3.1e-202 709.1 664 59.5
DCAR_016128 Daucus carota HOM05D002969 ORTHO05D003308 8.4e-200 701.0 661 56.7
Oeu007563.1 Olea europaea HOM05D002969 ORTHO05D003308 1.1e-199 700.7 664 57.5
MD09G1184300 Malus domestica HOM05D002969 ORTHO05D003308 2.5e-199 699.5 666 59.3
QL05p007828 Quercus lobata HOM05D002969 ORTHO05D003308 1.1e-196 690.6 665 58.2
Thecc.06G119100 Theobroma cacao HOM05D002969 ORTHO05D003308 9.6e-196 687.6 664 58.7
FAN05G1938 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.4e-194 683.7 665 58.0
Potri.003G064000 Populus trichocarpa HOM05D002969 ORTHO05D003308 7.6e-193 677.9 665 56.8
FvH4_6g34630 Fragaria vesca HOM05D002969 ORTHO05D003308 1.3e-192 677.2 665 57.9
FAN09G2022 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.3e-192 677.2 665 57.9
FAN14G5519 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.9e-192 676.0 665 57.9
Cc02_g14940 Coffea canephora HOM05D002969 ORTHO05D003308 1.3e-189 667.2 635 57.6
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 1.6e-187 660.2 607 60.3
Duzib235G1299 Durio zibethinus HOM05D002969 ORTHO05D003308 3.7e-187 659.1 665 55.8
Sabra03G0037600 Salix brachista HOM05D002969 ORTHO05D003308 1.7e-184 650.2 667 54.4
COL.COLO4_30764 Corchorus olitorius HOM05D002969 ORTHO05D003308 2.2e-184 649.8 664 54.7
Ciclev10024687m.g Citrus clementina HOM05D002969 ORTHO05D003308 1.4e-183 647.1 665 55.6
CAN.G397.51 Capsicum annuum HOM05D002969 ORTHO05D003308 6.1e-182 641.7 664 53.9
SGA_v2.0_scaffold71G23857 Striga asiatica HOM05D002969 ORTHO05D003308 2.5e-180 636.3 617 56.7
MSTRG.10956 Avicennia marina HOM05D002969 ORTHO05D003308 9.7e-180 634.4 637 54.6
Gohir.A05G405950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 6.3e-179 631.7 643 54.4
Aqoxy7G01394 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 1.4e-178 630.6 674 53.7
Manes.11G021000 Manihot esculenta HOM05D002969 ORTHO05D003308 1.4e-178 630.6 658 55.2
DCAR_022697 Daucus carota HOM05D002969 ORTHO05D003308 3.1e-178 629.4 674 52.5
Atru.chr1.3951 Acer truncatum HOM05D002969 ORTHO05D003308 3.4e-177 625.9 664 53.9
Sopen09g004560 Solanum pennellii HOM05D002969 ORTHO05D003308 3.8e-176 622.5 664 53.5
Gohir.D04G009700 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.1e-175 620.9 644 54.3
Migut.I01069 Erythranthe guttata HOM05D002969 ORTHO05D003308 1.4e-175 620.5 632 54.9
Solyc09g009800.3 Solanum lycopersicum HOM05D002969 ORTHO05D003308 1.4e-175 620.5 664 53.2
Peaxi162Scf00068g02519 Petunia axillaris HOM05D002969 ORTHO05D003308 2.5e-175 619.8 660 54.2
Gorai.012G011500 Gossypium raimondii HOM05D002969 ORTHO05D003308 4.2e-175 619.0 643 54.0
COL.COLO4_27975 Corchorus olitorius HOM05D002969 ORTHO05D003308 5.5e-175 618.6 664 53.2
Eucgr.J02821 Eucalyptus grandis HOM05D002969 ORTHO05D003308 2.7e-174 616.3 668 53.3
Glyma.02G000100 Glycine max HOM05D002969 ORTHO05D003308 6.3e-171 605.1 666 52.6
Nitab4.5_0000794g0160 Nicotiana tabacum HOM05D002969 ORTHO05D003308 6.3e-171 605.1 645 52.9
Glyma.19G263900 Glycine max HOM05D002969 ORTHO05D003308 8.2e-171 604.7 666 52.6
Lalb_Chr10g0094641 Lupinus albus HOM05D002969 ORTHO05D003308 8.2e-171 604.7 659 52.8
TPR.G14707 Trifolium pratense HOM05D002969 ORTHO05D003308 5.3e-170 602.1 665 52.0
TWI31G0668 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 7.0e-170 601.7 669 52.5
Ca_13957_v3 Cicer arietinum L. HOM05D002969 ORTHO05D003308 5.9e-169 598.6 667 51.9
Lj3g0017600 Lotus japonicus HOM05D002969 ORTHO05D003308 1.2e-166 590.9 665 53.2
ClCG05G007230 Citrullus lanatus HOM05D002969 ORTHO05D003308 8.0e-166 588.2 640 53.4
PSO017G1981 Papaver somniferum HOM05D002969 ORTHO05D003308 7.4e-164 581.6 631 52.3
CANSAT54G2721 Cannabis sativa HOM05D002969 ORTHO05D003308 8.2e-163 578.2 667 51.3
Medtr3g005240 Medicago truncatula HOM05D002969 ORTHO05D003308 8.2e-163 578.2 665 51.1
TPR.G25535 Trifolium pratense HOM05D002969 ORTHO05D003308 1.1e-162 577.8 671 51.1
vmacro15026 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 1.4e-162 577.4 504 62.9
PSO210G1276 Papaver somniferum HOM05D002969 ORTHO05D003308 7.0e-162 575.1 666 49.8
PSO447G0254 Papaver somniferum HOM05D002969 ORTHO05D003308 1.2e-161 574.3 670 50.0
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea HOM05D002969 ORTHO05D003308 2.6e-161 573.2 663 51.0
Lj5C38T4 Lonicera japonica HOM05D002969 ORTHO05D003308 5.9e-161 572.0 575 58.1
SalBow6G7155 Salvia bowleyana HOM05D002969 ORTHO05D003308 6.5e-160 568.5 664 49.7
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea HOM05D002969 ORTHO05D003308 1.5e-159 567.4 663 50.8
Psat1g003120 Pisum sativum HOM05D002969 ORTHO05D003308 3.2e-159 566.2 664 50.8
Phvul.007G234600 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 9.4e-159 564.7 717 47.3
CsaV3_3G015990 Cucumis sativus L. HOM05D002969 ORTHO05D003308 1.6e-158 563.9 640 51.6
Sed0027017 Sechium edule HOM05D002969 ORTHO05D003308 1.0e-157 561.2 675 50.4
HanXRQChr10g0301861 Helianthus annuus HOM05D002969 ORTHO05D003308 2.8e-155 553.1 671 51.1
ECA247G3059 Erigeron canadensis HOM05D002969 ORTHO05D003308 1.2e-153 547.7 652 49.4
AUR62010285 Chenopodium quinoa HOM05D002969 ORTHO05D003308 1.7e-152 543.9 667 49.3
Lsat_1_v5_gn_5_75740 Lactuca sativa HOM05D002969 ORTHO05D003308 1.5e-151 540.8 665 48.4
PGR102G0955 Punica granatum HOM05D002969 ORTHO05D003308 1.9e-151 540.4 667 46.9
ECA240G4395 Erigeron canadensis HOM05D002969 ORTHO05D003308 1.2e-148 531.2 660 48.0
Glyma.16G219900 Glycine max HOM05D002969 ORTHO05D003308 8.3e-147 525.0 692 47.4
THA.LOC104813957 Tarenaya hassleriana HOM05D002969 ORTHO05D003308 1.1e-146 524.6 663 47.7
Lsat_1_v5_gn_1_38040 Lactuca sativa HOM05D002969 ORTHO05D003308 4.1e-146 522.7 637 49.8
Peaxi162Scf00559g00315 Petunia axillaris HOM05D002969 ORTHO05D003308 1.5e-143 514.2 635 47.9
EL10Ac9g22289 Beta vulgaris HOM05D002969 ORTHO05D003308 1.2e-142 511.1 648 46.8
AUR62039104 Chenopodium quinoa HOM05D002969 ORTHO05D003308 3.0e-141 506.5 675 46.7
AT1G17450 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 2.0e-140 503.8 667 47.4
Thhalv10017997m.g Eutrema salsugineum HOM05D002969 ORTHO05D003308 2.6e-140 503.4 658 47.3
Carub.0001s1721 Capsella rubella HOM05D002969 ORTHO05D003308 1.8e-138 497.3 669 47.1
AL1G29730 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 5.4e-138 495.7 660 47.7
Sc18g0005650 Simmondsia chinensis HOM05D002969 ORTHO05D003308 1.3e-136 491.1 596 50.0
Aa31LG7G2260 Aethionema arabicum HOM05D002969 ORTHO05D003308 5.0e-136 489.2 664 45.0
BcaB06g26734 Brassica carinata HOM05D002969 ORTHO05D003308 5.0e-136 489.2 661 46.4
Carub.0002s0593 Capsella rubella HOM05D002969 ORTHO05D003308 5.0e-136 489.2 661 46.0
Sp3g22890 Schrenkiella parvula HOM05D002969 ORTHO05D003308 6.6e-136 488.8 662 46.1
A07p07070 Brassica napus HOM05D002969 ORTHO05D003308 8.6e-136 488.4 660 46.4
vmacro15029 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 3.3e-135 486.5 436 60.6
CARHR018040 Cardamine hirsuta HOM05D002969 ORTHO05D003308 3.1e-133 479.9 667 44.8
AT1G58766 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 8.9e-133 478.4 579 49.1
AT1G59077 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 8.9e-133 478.4 579 49.1
AT1G59453 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 8.9e-133 478.4 579 49.1
AL2G17610 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 6.0e-129 465.7 623 46.7
CiPaw.01G219300 Carya illinoinensis HOM05D002969 ORTHO05D003308 1.5e-127 461.1 403 64.3
MBI06_g12843_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 2.5e-127 460.3 530 49.4
BcaC06g35804 Brassica carinata HOM05D002969 ORTHO05D003308 9.8e-124 448.4 623 46.4
Ah.01g018170 Amaranthus hybridus HOM05D002969 ORTHO05D003308 1.3e-120 438.0 564 45.7
BraA07t28494Z Brassica rapa HOM05D002969 ORTHO05D003308 1.5e-119 434.5 606 45.5
BolC7t41532H Brassica oleracea HOM05D002969 ORTHO05D003308 1.6e-118 431.0 612 45.6
Ah.01g009920 Amaranthus hybridus HOM05D002969 ORTHO05D003308 8.1e-118 428.7 584 45.4
Prupe.8G262800 Prunus persica HOM05D002969 ORTHO05D003308 5.2e-117 426.0 662 42.1
CDE02G2049 Ceratophyllum demersum HOM05D002969 ORTHO05D003308 2.4e-109 400.6 661 40.7
unitig_26.g8927 Utricularia gibba HOM05D002969 ORTHO05D003308 2.9e-107 393.7 527 45.7
Nitab4.5_0010825g0010 Nicotiana tabacum HOM05D002969 ORTHO05D003308 1.2e-105 388.3 607 41.7
C07p10660 Brassica napus HOM05D002969 ORTHO05D003308 3.9e-104 383.3 577 44.0
Ah.01g009880 Amaranthus hybridus HOM05D002969 ORTHO05D003308 5.1e-104 382.9 570 43.3
Peaxi162Scf00006g00210 Petunia axillaris HOM05D002969 ORTHO05D003308 1.1e-103 381.7 366 58.2
Atru.chr4.3098 Acer truncatum HOM05D002969 ORTHO05D003308 5.8e-100 369.4 499 45.1
Phvul.011G011400 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 1.7e-99 367.9 663 37.6
Os02g0633100 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 5.4e-98 362.8 697 36.3
ATR0618G078 Amborella trichopoda HOM05D002969 ORTHO05D003308 5.8e-92 342.8 583 37.2
CAN.G947.7 Capsicum annuum HOM05D002969 ORTHO05D000105 4.2e-90 336.7 424 46.7
MBI06_g44919_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 9.3e-90 335.5 614 39.1
PGSC0003DMG401008881 Solanum tuberosum HOM05D002969 ORTHO05D003308 1.6e-81 308.1 316 54.1
Zm00001eb254800 Zea mays HOM05D002969 ORTHO05D003308 1.6e-81 308.1 534 36.1
MD11G1308600 Malus domestica HOM05D002969 ORTHO05D003308 7.4e-79 299.3 664 34.8
RcHm_v2.0_Chr6g0291551 Rosa chinensis HOM05D002969 ORTHO05D003308 4.1e-77 293.5 528 38.4
Cpa.g.sc34.72 Carica papaya HOM05D002969 ORTHO05D003308 3.4e-76 290.4 264 58.3
Duzib192G0334 Durio zibethinus HOM05D002969 ORTHO05D003308 1.3e-75 288.5 515 37.1
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 5.0e-75 286.6 299 53.8
Glyma.19G019300 Glycine max HOM05D002969 ORTHO05D003308 1.4e-69 268.5 281 55.2
SEGI_12678 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 5.1e-64 250.0 388 40.2
Pp3c4_16500 Physcomitrium patens HOM05D002969 ORTHO05D003308 1.7e-59 235.0 727 28.6
Aqoxy4G01957 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 3.8e-59 233.8 332 40.1
FAN24G1542 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.9e-58 231.5 526 34.4
Zm00001eb254720 Zea mays HOM05D002969 ORTHO05D003308 1.0e-56 225.7 450 33.6
FvH4_2g23920 Fragaria vesca HOM05D002969 ORTHO05D003308 5.1e-56 223.4 509 34.4
Cfa003558 Carpinus fangiana HOM05D002969 ORTHO05D003308 6.7e-56 223.0 513 35.7
Haze_15990 Corylus avellana HOM05D002969 ORTHO05D003308 7.4e-55 219.5 512 35.7
SMO119G0293 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 1.1e-53 215.7 599 28.7
HPP92_011314 Vanilla planifolia HOM05D002969 ORTHO05D003308 4.1e-53 213.8 445 33.7
TWI31G0627 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 7.0e-53 213.0 508 33.5
FAN15G1247 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.0e-51 209.1 525 32.6
Thecc.06G115400 Theobroma cacao HOM05D002969 ORTHO05D003308 5.5e-50 203.4 509 32.0
Psat0s1819g0040 Pisum sativum HOM05D002969 ORTHO05D003308 2.1e-49 201.4 243 49.8
Psat5g267240 Pisum sativum HOM05D002969 ORTHO05D003308 2.1e-49 201.4 243 49.8
Gohir.A01G106450 Gossypium hirsutum HOM05D002969 ORTHO05D003308 3.8e-43 180.6 267 43.4
COL.COLO4_30697 Corchorus olitorius HOM05D002969 ORTHO05D003308 7.2e-42 176.4 280 41.1
Glyma.17G219802 Glycine max HOM05D002969 ORTHO05D003308 1.6e-41 175.3 137 67.2
Mapoly0002s0195 Marchantia polymorpha HOM05D002969 ORTHO05D003308 1.6e-41 175.3 830 24.7
Zm00001eb247940 Zea mays HOM05D002969 ORTHO05D003308 2.1e-41 174.9 290 37.2
AagrBONN_evm.TU.Sc2ySwM_344.4533 Anthoceros agrestis HOM05D002969 ORTHO05D003308 2.3e-40 171.4 553 27.7
Zm00001eb254630 Zea mays HOM05D002969 ORTHO05D003308 7.5e-39 166.4 443 29.8
Peaxi162Scf00006g00026 Petunia axillaris HOM05D002969 ORTHO05D003308 7.0e-37 159.8 179 50.3
Rhsim08G0220000 Rhododendron simsii HOM05D002969 ORTHO05D003308 2.0e-36 158.3 306 37.9
PSO700G0258 Papaver somniferum HOM05D002969 ORTHO05D003308 2.7e-36 157.9 197 47.2
BolC7t43569H Brassica oleracea HOM05D002969 ORTHO05D003308 7.7e-36 156.4 160 53.8
SMO196G0130 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 1.0e-35 156.0 620 25.3
BcaC06g34331 Brassica carinata HOM05D002969 ORTHO05D003308 2.9e-35 154.5 187 48.1
C07p30270 Brassica napus HOM05D002969 ORTHO05D003308 6.8e-32 143.3 126 57.9
SEGI_00835 Sequoiadendron giganteum HOM05D002969 ORTHO05D011582 5.7e-31 140.2 272 35.3
FAN27G1917 Fragaria x ananassa HOM05D002969 ORTHO05D003308 6.3e-30 136.7 453 29.6
Gorai.002G118300 Gossypium raimondii HOM05D002969 ORTHO05D003308 2.4e-29 134.8 216 41.7
Cpa.g.sc34.70 Carica papaya HOM05D002969 ORTHO05D003308 2.9e-27 127.9 126 51.6
Gorai.010G233800 Gossypium raimondii HOM05D002969 ORTHO05D003308 5.0e-27 127.1 205 41.0
Gohir.D06G200300 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.9e-26 125.2 205 40.5
Zm00001eb254760 Zea mays HOM05D002969 ORTHO05D003308 1.9e-26 125.2 330 30.9
Lalb_Chr10g0094381 Lupinus albus HOM05D002969 ORTHO05D003308 7.2e-26 123.2 142 51.4
Rhsim08G0238600 Rhododendron simsii HOM05D042098 ORTHO05D003308 7.2e-26 123.2 234 38.9
Medtr8g062660 Medicago truncatula HOM05D000007 ORTHO05D003308 9.5e-26 122.9 217 39.6
Gohir.D01G092950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 2.0e-23 115.2 216 38.4
Migut.E00647 Erythranthe guttata HOM05D002969 ORTHO05D003308 9.8e-23 112.8 106 55.7
Zm00001eb247930 Zea mays HOM05D002969 ORTHO05D003308 1.6e-20 105.5 174 35.6
Gohir.A06G192400 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.0e-19 102.8 205 36.6
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 2.5e-18 98.2 76 59.2
Aqoxy4G01956 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 6.0e-12 77.0 137 43.8


User provided reference genes

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