Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30655 Davidia involucrata HOM05D007680 ORTHO05D009702 8.1e-88 327.0 162 100.0
Hma1.2p1_0026F.1_g016760 Hydrangea macrophylla HOM05D007680 ORTHO05D009702 1.1e-36 157.1 152 63.8
vmacro10277 Vaccinium macrocarpon HOM05D007680 ORTHO05D009702 4.5e-30 135.2 146 54.8
TAR636G0370 Trochodendron aralioides HOM05D007680 ORTHO05D009702 2.5e-28 129.4 147 58.5
Haze_02610 Corylus avellana HOM05D007680 ORTHO05D009702 1.4e-26 123.6 150 50.7
GSVIVG01034708001 Vitis vinifera HOM05D007680 ORTHO05D009702 8.8e-26 120.9 146 52.1
FAN03G2755 Fragaria x ananassa HOM05D007680 ORTHO05D009702 1.3e-24 117.1 144 52.1
MELO3C012366.2 Cucumis melo HOM05D007680 ORTHO05D009702 2.2e-24 116.3 155 47.7
Sed0005690 Sechium edule HOM05D007680 ORTHO05D009702 3.7e-24 115.5 130 49.2
CiPaw.14G028600 Carya illinoinensis HOM05D007680 ORTHO05D009702 1.1e-23 114.0 152 48.0
Prupe.2G086600 Prunus persica HOM05D007680 ORTHO05D009702 1.8e-23 113.2 148 52.7
Oeu060261.1 Olea europaea HOM05D007680 ORTHO05D009702 2.4e-23 112.8 146 50.0
Cfa011226 Carpinus fangiana HOM05D007680 ORTHO05D009702 4.1e-23 112.1 148 47.3
MD07G1087200 Malus domestica HOM05D007680 ORTHO05D009702 4.1e-23 112.1 151 51.0
Nn2g14013 Nelumbo nucifera HOM05D007680 ORTHO05D009702 5.3e-23 111.7 132 50.0
ClCG05G021580 Citrullus lanatus HOM05D007680 ORTHO05D009702 1.2e-22 110.5 100 59.0
Actinidia31090 Actinidia chinensis HOM05D007680 ORTHO05D009702 1.6e-22 110.2 102 61.8
CsaV3_5G035650 Cucumis sativus L. HOM05D007680 ORTHO05D009702 1.0e-21 107.5 98 59.2
Duzib128G1419 Durio zibethinus HOM05D007680 ORTHO05D009702 1.0e-21 107.5 146 46.6
QL04p041248 Quercus lobata HOM05D007680 ORTHO05D009702 1.7e-21 106.7 151 49.7
FAN06G0858 Fragaria x ananassa HOM05D007680 ORTHO05D009702 2.2e-21 106.3 143 48.3
Manes.05G202400 Manihot esculenta HOM05D007680 ORTHO05D009702 2.9e-21 105.9 129 51.2
TAR636G3254 Trochodendron aralioides HOM05D007680 ORTHO05D009702 2.9e-21 105.9 116 60.3
ATR0820G188 Amborella trichopoda HOM05D007680 ORTHO05D009702 6.5e-21 104.8 134 51.5
SalBow6G1777 Salvia bowleyana HOM05D007680 ORTHO05D009702 1.5e-20 103.6 138 47.1
Cpa.g.sc128.47 Carica papaya HOM05D007680 ORTHO05D009702 4.2e-20 102.1 149 45.6
Thecc.10G109800 Theobroma cacao HOM05D007680 ORTHO05D009702 4.2e-20 102.1 143 46.9
Thecc.K0008600 Theobroma cacao HOM05D007680 ORTHO05D009702 4.2e-20 102.1 143 46.9
CDE02G0611 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 9.4e-20 100.9 144 43.8
Gohir.A05G288200 Gossypium hirsutum HOM05D007680 ORTHO05D009702 2.1e-19 99.8 147 44.9
Aqoxy2G01382 Aquilegia oxysepala HOM05D007680 ORTHO05D009702 4.7e-19 98.6 147 46.3
Potri.008G025700 Populus trichocarpa HOM05D007680 ORTHO05D009702 4.7e-19 98.6 143 46.2
Sabra10G0182100 Salix brachista HOM05D007680 ORTHO05D009702 8.0e-19 97.8 85 63.5
CSS0013494 Camellia sinensis var. sinensis HOM05D007680 ORTHO05D009702 1.0e-18 97.4 66 78.8
Migut.F01656 Erythranthe guttata HOM05D007680 ORTHO05D009702 1.0e-18 97.4 131 49.6
Gorai.009G304500 Gossypium raimondii HOM05D007680 ORTHO05D009702 1.4e-18 97.1 147 45.6
Gohir.D05G289400 Gossypium hirsutum HOM05D007680 ORTHO05D009702 1.8e-18 96.7 147 44.2
MD07G1069500 Malus domestica HOM05D007680 ORTHO05D009702 1.8e-18 96.7 104 56.7
Ah.10g034230 Amaranthus hybridus HOM05D007680 ORTHO05D009702 5.2e-18 95.1 100 53.0
Sopen11g003400 Solanum pennellii HOM05D007680 ORTHO05D009702 8.8e-18 94.4 104 51.9
CDE08G1572 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 1.5e-17 93.6 106 51.9
PGSC0003DMG400027341 Solanum tuberosum HOM05D007680 ORTHO05D009702 1.5e-17 93.6 103 53.4
Lj2C27T21 Lonicera japonica HOM05D007680 ORTHO05D009702 2.0e-17 93.2 155 40.6
PSO384G1244 Papaver somniferum HOM05D007680 ORTHO05D009702 4.4e-17 92.0 149 43.6
Ciclev10032885m.g Citrus clementina HOM05D007680 ORTHO05D009702 1.7e-16 90.1 147 41.5
Atru.chr12.970 Acer truncatum HOM05D007680 ORTHO05D009702 3.7e-16 89.0 66 66.7
MBI17_g11658_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 3.7e-16 89.0 67 73.1
Potri.010G234900 Populus trichocarpa HOM05D007680 ORTHO05D009702 4.8e-16 88.6 146 45.2
EL10Ac2g03857 Beta vulgaris HOM05D007680 ORTHO05D009702 6.3e-16 88.2 135 44.4
COL.COLO4_33896 Corchorus olitorius HOM05D007680 ORTHO05D009702 1.1e-15 87.4 140 41.4
TAR636G2061 Trochodendron aralioides HOM05D007680 ORTHO05D009702 1.8e-15 86.7 68 72.1
AUR62043943 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.1e-15 85.9 96 55.2
Hund17353 Selenicereus undatus HOM05D007680 ORTHO05D009702 3.1e-15 85.9 60 66.7
HanXRQChr08g0217901 Helianthus annuus HOM05D007680 ORTHO05D009702 5.4e-15 85.1 146 41.8
Thhalv10026523m.g Eutrema salsugineum HOM05D007680 ORTHO05D009702 7.0e-15 84.7 100 52.0
PGR044G0006 Punica granatum HOM05D007680 ORTHO05D009702 7.0e-15 84.7 129 48.1
THA.LOC104824894 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 9.1e-15 84.3 133 45.1
THA.LOC104824900 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 9.1e-15 84.3 133 45.1
RcHm_v2.0_Chr1g0333251 Rosa chinensis HOM05D007680 ORTHO05D009702 3.5e-14 82.4 130 46.2
unitig_899.g15034 Utricularia gibba HOM05D007680 ORTHO05D009702 7.7e-14 81.3 128 46.1
Lsat_1_v5_gn_2_102521 Lactuca sativa HOM05D007680 ORTHO05D009702 1.0e-13 80.9 146 39.0
Lj6g0009049 Lotus japonicus HOM05D007680 ORTHO05D009702 3.8e-13 79.0 129 43.4
Sp7g35810 Schrenkiella parvula HOM05D007680 ORTHO05D009702 5.0e-13 78.6 102 48.0
Lalb_Chr01g0010321 Lupinus albus HOM05D007680 ORTHO05D009702 8.5e-13 77.8 56 67.9
Sc20g0001300 Simmondsia chinensis HOM05D007680 ORTHO05D009702 8.5e-13 77.8 48 70.8
Phvul.007G245300 Phaseolus vulgaris HOM05D007680 ORTHO05D009702 1.1e-12 77.4 130 44.6
Medtr1g050700 Medicago truncatula HOM05D007680 ORTHO05D009702 1.9e-12 76.6 76 59.2
CARHR246610 Cardamine hirsuta HOM05D007680 ORTHO05D009702 2.5e-12 76.3 100 48.0
SGA_v2.0_scaffold10G05320 Striga asiatica HOM05D007680 ORTHO05D009702 3.2e-12 75.9 123 48.0
TPR.G305 Trifolium pratense HOM05D007680 ORTHO05D009702 3.2e-12 75.9 50 78.0
TPR.G7612 Trifolium pratense HOM05D007680 ORTHO05D009702 3.2e-12 75.9 50 78.0
TWI38G2267 Tripterygium wilfordii HOM05D007680 ORTHO05D009702 3.2e-12 75.9 153 39.9
VMungo0720G1600 Vigna mungo HOM05D007680 ORTHO05D009702 4.2e-12 75.5 80 52.5
Glyma.02G165700 Glycine max HOM05D007680 ORTHO05D009702 5.5e-12 75.1 59 62.7
Psat6g094320 Pisum sativum HOM05D007680 ORTHO05D009702 5.5e-12 75.1 61 67.2
arahy.Tifrunner.gnm1.ann1.VK4BH4 Arachis hypogaea HOM05D007680 ORTHO05D009702 7.2e-12 74.7 50 72.0
AT4G40045 Arabidopsis thaliana HOM05D007680 ORTHO05D009702 1.2e-11 73.9 91 51.6
A01p00970 Brassica napus HOM05D007680 ORTHO05D009702 2.1e-11 73.2 104 48.1
BraA01t00095Z Brassica rapa HOM05D007680 ORTHO05D009702 2.1e-11 73.2 104 48.1
AL7G12370 Arabidopsis lyrata HOM05D007680 ORTHO05D009702 3.6e-11 72.4 61 62.3
Glyma.10G104651 Glycine max HOM05D007680 ORTHO05D009702 8.0e-11 71.2 41 80.5
Carub.0007s0203 Capsella rubella HOM05D007680 ORTHO05D009702 3.0e-10 69.3 100 45.0
SGA_v2.0_scaffold154G37188 Striga asiatica HOM05D004374 ORTHO05D005430 5.2e-10 68.6 44 68.2
SEGI_03872 Sequoiadendron giganteum HOM05D007680 ORTHO05D009702 1.2e-09 67.4 106 41.5
Lalb_Chr19g0129271 Lupinus albus HOM05D007680 ORTHO05D009702 3.4e-09 65.9 141 36.2
DCAR_006372 Daucus carota HOM05D007680 ORTHO05D009702 1.3e-08 63.9 118 39.0
BolC1t00107H Brassica oleracea HOM05D007680 ORTHO05D009702 2.8e-08 62.8 50 72.0
arahy.Tifrunner.gnm1.ann1.UIS3VC Arachis hypogaea HOM05D007680 ORTHO05D009702 4.9e-08 62.0 84 46.4
C01p01090 Brassica napus HOM05D007680 ORTHO05D009702 6.3e-08 61.6 50 70.0
MBI17_g15050_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 6.3e-08 61.6 115 42.6


User provided reference genes

Program Settings