Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 1.8e-66 255.8 127 100.0
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 2.5e-28 129.0 98 67.3
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 7.4e-28 127.5 127 57.5
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 4.9e-24 114.8 95 63.2
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 1.1e-23 113.6 109 62.4
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 1.1e-23 113.6 101 66.3
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.6e-22 109.8 140 51.4
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 3.9e-21 105.1 130 53.8
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 1.3e-19 100.1 124 50.0
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 8.2e-19 97.4 95 57.9
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 1.1e-18 97.1 114 50.9
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 1.1e-18 97.1 127 48.8
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 1.4e-18 96.7 127 48.8
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 1.8e-18 96.3 99 56.6
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 3.1e-18 95.5 103 56.3
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 9.0e-18 94.0 99 53.5
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 9.0e-18 94.0 76 64.5
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 7.6e-17 90.9 142 45.1
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 7.6e-17 90.9 101 51.5
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.2e-16 89.4 98 52.0
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 2.2e-16 89.4 139 47.5
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 3.8e-16 88.6 98 53.1
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 5.0e-16 88.2 78 62.8
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 5.0e-16 88.2 78 62.8
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 5.0e-16 88.2 78 62.8
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 8.5e-16 87.4 98 55.1
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 8.5e-16 87.4 76 65.8
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 1.4e-15 86.7 120 50.0
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 1.4e-15 86.7 134 46.3
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 1.4e-15 86.7 129 48.1
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 2.5e-15 85.9 98 51.0
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 3.2e-15 85.5 84 57.1
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 5.5e-15 84.7 122 47.5
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 9.4e-15 84.0 102 50.0
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 9.4e-15 84.0 81 54.3
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 1.2e-14 83.6 98 51.0
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 1.2e-14 83.6 129 43.4
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 1.2e-14 83.6 125 48.0
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 6.1e-14 81.3 72 55.6
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 7.9e-14 80.9 126 46.0
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 1.0e-13 80.5 75 60.0
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 1.4e-13 80.1 133 46.6
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 1.8e-13 79.7 86 58.1
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 5.1e-13 78.2 49 75.5
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 5.1e-13 78.2 100 51.0
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 6.7e-13 77.8 81 54.3
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 6.7e-13 77.8 101 53.5
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 8.8e-13 77.4 86 51.2
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 1.5e-12 76.6 88 53.4
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 1.5e-12 76.6 101 51.5
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 1.9e-12 76.3 96 52.1
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.9e-12 76.3 96 52.1
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 4.3e-12 75.1 96 52.1
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 4.3e-12 75.1 78 56.4
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 4.3e-12 75.1 48 75.0
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 7.4e-12 74.3 149 40.9
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 2.8e-11 72.4 112 45.5
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 3.1e-10 68.9 75 50.7
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 6.9e-10 67.8 91 46.2
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 9.1e-10 67.4 76 52.6
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.2e-09 67.0 75 52.0
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.5e-09 66.6 75 52.0
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 1.5e-09 66.6 75 52.0
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 4.5e-09 65.1 119 39.5
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 5.9e-09 64.7 75 49.3
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 1.0e-08 63.9 114 38.6
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 1.3e-08 63.5 39 69.2
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.7e-08 63.2 72 52.8
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.7e-08 63.2 72 52.8
Actinidia15990 Actinidia chinensis HOM05D007722 ORTHO05D009730 2.9e-08 62.4 124 39.5
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 8.5e-08 60.8 84 40.5
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 3.2e-07 58.9 107 39.3
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 9.4e-07 57.4 47 55.3
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 1.2e-06 57.0 47 55.3
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 3.6e-06 55.5 109 35.8
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 4.7e-06 55.1 134 37.3


User provided reference genes

Program Settings