Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 4.9e-78 294.3 137 100.0
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 4.7e-28 128.3 93 63.4
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.8e-27 126.3 91 65.9
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 2.8e-25 119.0 93 65.6
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.1e-24 117.1 95 63.2
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 2.4e-24 115.9 94 58.5
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 5.3e-24 114.8 96 58.3
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 2.6e-23 112.5 95 55.8
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 3.5e-23 112.1 103 58.3
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 7.7e-23 110.9 93 55.9
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.1e-21 107.1 90 56.7
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 3.2e-21 105.5 96 61.5
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 7.2e-21 104.4 93 51.6
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.2e-20 103.6 90 55.6
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 1.2e-20 103.6 95 54.7
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 2.7e-20 102.4 99 51.5
Oeu006796.1 Olea europaea HOM05D005672 ORTHO05D003038 3.6e-20 102.1 90 60.0
MSTRG.22696 Avicennia marina HOM05D005672 ORTHO05D003038 4.7e-20 101.7 91 50.5
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 6.1e-20 101.3 95 53.7
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 1.0e-19 100.5 96 55.2
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 1.4e-19 100.1 88 55.7
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 1.4e-19 100.1 94 53.2
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 5.2e-19 98.2 93 50.5
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 8.8e-19 97.4 90 53.3
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 1.2e-18 97.1 88 53.4
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 1.5e-18 96.7 94 50.0
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 3.4e-18 95.5 102 49.0
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 6.3e-17 91.3 88 50.0
SGA_v2.0_scaffold5G02600 Striga asiatica HOM05D005672 ORTHO05D003038 6.3e-17 91.3 81 50.6
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 8.3e-17 90.9 86 46.5
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 8.3e-17 90.9 86 46.5
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 8.3e-17 90.9 86 46.5
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 1.1e-16 90.5 78 59.0
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 2.4e-16 89.4 103 44.7
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 3.1e-16 89.0 94 45.7
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 3.1e-16 89.0 92 46.7
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 4.1e-16 88.6 94 53.2
Prupe.3G073800 Prunus persica HOM05D005672 ORTHO05D003038 4.1e-16 88.6 92 46.7
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 4.1e-16 88.6 103 44.7
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 4.1e-16 88.6 103 44.7
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 7.0e-16 87.8 89 44.9
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 1.2e-15 87.0 91 41.8
Duzib192G0991 Durio zibethinus HOM05D005672 ORTHO05D003038 1.6e-15 86.7 86 50.0
unitig_21.g20351 Utricularia gibba HOM05D005672 ORTHO05D003038 1.6e-15 86.7 92 46.7
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 2.0e-15 86.3 92 47.8
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 3.5e-15 85.5 94 45.7
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 1.3e-14 83.6 90 47.8
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 1.3e-14 83.6 92 46.7
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 1.7e-14 83.2 92 46.7
CAN.G395.17 Capsicum annuum HOM05D005672 ORTHO05D003038 2.2e-14 82.8 107 42.1
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 5.0e-14 81.6 100 42.0
Atru.chr1.3245 Acer truncatum HOM05D005672 ORTHO05D003038 6.5e-14 81.3 93 39.8
ECA234G3627 Erigeron canadensis HOM05D005672 ORTHO05D003038 6.5e-14 81.3 84 48.8
Nn2g11778 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.1e-13 80.5 93 40.9
Manes.04G121900 Manihot esculenta HOM05D005672 ORTHO05D003038 1.5e-13 80.1 95 44.2
Manes.04G122000 Manihot esculenta HOM05D005672 ORTHO05D003038 1.5e-13 80.1 95 44.2
Manes.04G122100 Manihot esculenta HOM05D005672 ORTHO05D003038 2.5e-13 79.3 95 44.2
PGR102G1467 Punica granatum HOM05D005672 ORTHO05D003038 3.2e-13 79.0 98 40.8
Nitab4.5_0000351g0210 Nicotiana tabacum HOM05D005672 ORTHO05D003038 5.5e-13 78.2 112 38.4
DCAR_026309 Daucus carota HOM05D005672 ORTHO05D003038 1.2e-12 77.0 107 32.7
Duzib192G0281 Durio zibethinus HOM05D005672 ORTHO05D003038 1.2e-12 77.0 86 46.5
Nitab4.5_0002327g0030 Nicotiana tabacum HOM05D005672 ORTHO05D003038 3.6e-12 75.5 113 38.9
Prupe.3G072600 Prunus persica HOM05D005672 ORTHO05D003038 3.6e-12 75.5 84 45.2
Ciclev10027058m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.0e-11 73.9 79 51.9
MELO3C023361.2 Cucumis melo HOM05D005672 ORTHO05D003038 1.0e-11 73.9 78 42.3
CsaV3_7G033060 Cucumis sativus L. HOM05D005672 ORTHO05D003038 1.4e-11 73.6 78 42.3
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.4e-11 73.6 123 37.4
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 1.8e-11 73.2 88 45.5
ClCG09G002230 Citrullus lanatus HOM05D005672 ORTHO05D003038 2.3e-11 72.8 77 42.9
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 2.3e-11 72.8 100 40.0
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 3.0e-11 72.4 97 41.2
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 4.0e-11 72.0 94 44.7
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 4.0e-11 72.0 92 43.5
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 5.2e-11 71.6 88 44.3
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.2e-10 70.5 86 40.7
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 1.5e-10 70.1 91 41.8
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 2.0e-10 69.7 90 37.8
Gohir.A09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 2.6e-10 69.3 99 35.4
Gohir.D09G083500 Gossypium hirsutum HOM05D005672 ORTHO05D003038 2.6e-10 69.3 99 35.4
Gorai.006G099100 Gossypium raimondii HOM05D005672 ORTHO05D003038 2.6e-10 69.3 99 35.4
FvH4_6g30990 Fragaria vesca HOM05D005672 ORTHO05D003038 3.4e-10 68.9 93 37.6
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 4.4e-10 68.6 95 40.0
Ciclev10027446m.g Citrus clementina HOM05D005672 ORTHO05D003038 9.8e-10 67.4 91 46.2
PSO339G1026 Papaver somniferum HOM05D007482 ORTHO05D003038 2.2e-09 66.2 96 40.6
Potri.003G056450 Populus trichocarpa HOM05D005672 ORTHO05D003038 2.2e-09 66.2 95 41.1
ClCG09G002270 Citrullus lanatus HOM05D005672 ORTHO05D003038 2.8e-09 65.9 75 40.0
COL.COLO4_30353 Corchorus olitorius HOM05D005672 ORTHO05D003038 2.8e-09 65.9 56 55.4
Peaxi162Scf00207g00940 Petunia axillaris HOM05D005672 ORTHO05D003038 3.7e-09 65.5 103 38.8
Sp1g11250 Schrenkiella parvula HOM05D007482 ORTHO05D003038 4.8e-09 65.1 94 35.1
Gohir.A09G083700 Gossypium hirsutum HOM05D005672 ORTHO05D003038 6.3e-09 64.7 68 45.6
Nn8g39244 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.1e-08 63.9 95 38.9
Nn8g39246 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.1e-08 63.9 93 35.5
ClCG09G002220 Citrullus lanatus HOM05D005672 ORTHO05D003038 1.4e-08 63.5 83 44.6
Nn8g39240 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.4e-08 63.5 93 41.9
CSS0026145 Camellia sinensis var. sinensis HOM05D005672 ORTHO05D003038 1.8e-08 63.2 42 66.7
Sed0007263 Sechium edule HOM05D005672 ORTHO05D003038 2.4e-08 62.8 90 40.0
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 3.1e-08 62.4 94 33.0
PGR031G0360 Punica granatum HOM05D005672 ORTHO05D003038 7.0e-08 61.2 94 38.3
PGR031G3744 Punica granatum HOM05D005672 ORTHO05D003038 7.0e-08 61.2 94 38.3
C08p47230 Brassica napus HOM05D007482 ORTHO05D003038 9.1e-08 60.8 96 34.4
BcaC01g02807 Brassica carinata HOM05D007482 ORTHO05D003038 1.2e-07 60.5 94 31.9
A06p32510 Brassica napus HOM05D007482 ORTHO05D003038 1.2e-07 60.5 94 31.9
C03p60060 Brassica napus HOM05D007482 ORTHO05D003038 1.2e-07 60.5 94 31.9
BolC3t18270H Brassica oleracea HOM05D007482 ORTHO05D003038 1.2e-07 60.5 94 31.9
BraA06t26175Z Brassica rapa HOM05D007482 ORTHO05D003038 1.2e-07 60.5 94 31.9
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 1.6e-07 60.1 92 35.9
Duzib235G0878 Durio zibethinus HOM05D005672 ORTHO05D003038 1.6e-07 60.1 93 35.5
BcaB08g34260 Brassica carinata HOM05D007482 ORTHO05D003038 2.0e-07 59.7 94 33.0
PSO339G4707 Papaver somniferum HOM05D007482 ORTHO05D003038 4.5e-07 58.5 91 40.7
CARHR012970 Cardamine hirsuta HOM05D007482 ORTHO05D003038 5.9e-07 58.2 90 30.0
BolC8t52263H Brassica oleracea HOM05D007482 ORTHO05D003038 1.0e-06 57.4 137 30.7
Thhalv10009569m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 1.0e-06 57.4 95 34.7
PSO648G0129 Papaver somniferum HOM05D007482 ORTHO05D003038 1.0e-06 57.4 96 36.5
BcaB08g34259 Brassica carinata HOM05D007482 ORTHO05D003038 1.3e-06 57.0 94 31.9
C08p47220 Brassica napus HOM05D007482 ORTHO05D003038 1.3e-06 57.0 94 31.9
BolC8t52261H Brassica oleracea HOM05D007482 ORTHO05D003038 1.3e-06 57.0 94 31.9
BolC8t52262H Brassica oleracea HOM05D007482 ORTHO05D003038 1.3e-06 57.0 94 31.9
A09p63720 Brassica napus HOM05D007482 ORTHO05D003038 1.7e-06 56.6 89 32.6
BraA09t41720Z Brassica rapa HOM05D007482 ORTHO05D003038 1.7e-06 56.6 89 32.6
Ciclev10026803m.g Citrus clementina HOM05D005672 ORTHO05D003038 2.3e-06 56.2 94 37.2
Duzib235G0754 Durio zibethinus HOM05D005672 ORTHO05D003038 2.3e-06 56.2 93 31.2
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 3.8e-06 55.5 91 33.0
Thhalv10009322m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 3.8e-06 55.5 96 33.3
CAN.G438.58 Capsicum annuum HOM05D005672 ORTHO05D003038 8.6e-06 54.3 104 36.5
Prupe.3G073000 Prunus persica HOM05D005672 ORTHO05D003038 8.6e-06 54.3 93 34.4


User provided reference genes

Program Settings