Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30455 Davidia involucrata HOM05D000454 ORTHO05D002637 3.4e-85 318.9 248 100.0
Hma1.2p1_0659F.1_g197390 Hydrangea macrophylla HOM05D000454 ORTHO05D002637 7.9e-26 121.7 192 66.1
Hma1.2p1_1056F.1_g252690 Hydrangea macrophylla HOM05D000454 ORTHO05D002637 1.9e-24 117.1 176 67.0
Aqoxy7G01501 Aquilegia oxysepala HOM05D000454 ORTHO05D002637 3.1e-22 109.8 174 64.9
Thecc.06G097000 Theobroma cacao HOM05D000454 ORTHO05D002637 5.3e-22 109.0 174 66.7
TAR383G0435 Trochodendron aralioides HOM05D000454 ORTHO05D002637 3.8e-20 102.8 174 60.9
QL05p020771 Quercus lobata HOM05D000454 ORTHO05D002637 8.5e-20 101.7 175 37.7
Nn3g18151 Nelumbo nucifera HOM05D000454 ORTHO05D002637 9.4e-19 98.2 173 62.4
Duzib168G0801 Durio zibethinus HOM05D000454 ORTHO05D002637 2.7e-18 96.7 168 64.9
Atru.chr1.3491 Acer truncatum HOM05D000454 ORTHO05D002637 1.4e-17 94.4 148 71.6
Lsat_1_v5_gn_1_47140 Lactuca sativa HOM05D000454 ORTHO05D002637 1.4e-17 94.4 173 58.4
Atru.chr7.2112 Acer truncatum HOM05D000454 ORTHO05D002637 3.9e-17 92.8 175 60.0
MBI04_g02615_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D002637 3.9e-17 92.8 171 59.6
Dinv14254 Davidia involucrata HOM05D000454 ORTHO05D002637 4.3e-16 89.4 174 59.8
Prupe.3G062400 Prunus persica HOM05D000454 ORTHO05D002637 4.3e-16 89.4 174 63.2
Atru.chr7.2100 Acer truncatum HOM05D000454 ORTHO05D002637 5.7e-16 89.0 174 58.6
Atru.chr7.2114 Acer truncatum HOM05D000454 ORTHO05D002637 5.7e-16 89.0 174 58.6
QL05p020680 Quercus lobata HOM05D000454 ORTHO05D002637 5.7e-16 89.0 70 58.6
FAN05G3019 Fragaria x ananassa HOM05D000454 ORTHO05D002637 7.4e-16 88.6 80 52.5
HanXRQChr11g0352041 Helianthus annuus HOM05D000454 ORTHO05D002637 7.4e-16 88.6 174 59.2
QL05p020655 Quercus lobata HOM05D000454 ORTHO05D002637 2.2e-15 87.0 70 60.0
Duzib192G1039 Durio zibethinus HOM05D000454 ORTHO05D002637 2.8e-15 86.7 173 32.9
CANSAT56G0237 Cannabis sativa HOM05D000454 ORTHO05D002637 3.7e-15 86.3 70 58.6
Haze_15818 Corylus avellana HOM05D000454 ORTHO05D002637 3.7e-15 86.3 174 60.3
Ciclev10007796m.g Citrus clementina HOM05D000454 ORTHO05D002637 4.8e-15 85.9 174 57.5
COL.COLO4_18654 Corchorus olitorius HOM05D000454 ORTHO05D002637 1.4e-14 84.3 173 61.8
Potri.001G187600 Populus trichocarpa HOM05D000454 ORTHO05D002637 1.4e-14 84.3 176 59.7
RcHm_v2.0_Chr2g0139771 Rosa chinensis HOM05D000454 ORTHO05D002637 1.4e-14 84.3 68 55.9
GSVIVG01035638001 Vitis vinifera HOM05D000454 ORTHO05D002637 1.4e-14 84.3 186 59.1
ATR0315G145 Amborella trichopoda HOM05D000454 ORTHO05D002637 2.4e-14 83.6 174 59.2
FvH4_6g32100 Fragaria vesca HOM05D000454 ORTHO05D002637 2.4e-14 83.6 68 55.9
FAN14G0706 Fragaria x ananassa HOM05D000454 ORTHO05D002637 2.4e-14 83.6 68 55.9
PGSC0003DMG400004315 Solanum tuberosum HOM05D000454 ORTHO05D002637 2.4e-14 83.6 181 60.2
RcHm_v2.0_Chr1g0353591 Rosa chinensis HOM05D000454 ORTHO05D002637 4.1e-14 82.8 68 55.9
Prupe.3G062200 Prunus persica HOM05D000454 ORTHO05D002637 5.3e-14 82.4 175 39.4
TWI34G0381 Tripterygium wilfordii HOM05D000454 ORTHO05D002637 5.3e-14 82.4 174 56.9
VMungo1080G0542 Vigna mungo HOM05D000454 ORTHO05D002637 5.3e-14 82.4 70 50.0
Cpa.g.sc56.53 Carica papaya HOM05D000454 ORTHO05D002637 6.9e-14 82.0 174 54.6
Medtr2g101320 Medicago truncatula HOM05D000454 ORTHO05D002637 6.9e-14 82.0 70 51.4
QL05p020685 Quercus lobata HOM05D000454 ORTHO05D002637 6.9e-14 82.0 70 58.6
CiPaw.01G233400 Carya illinoinensis HOM05D000454 ORTHO05D002637 9.1e-14 81.6 70 51.4
TPR.G27663 Trifolium pratense HOM05D000454 ORTHO05D002637 9.1e-14 81.6 70 51.4
Ciclev10007811m.g Citrus clementina HOM05D000454 ORTHO05D002637 1.2e-13 81.3 70 48.6
Potri.018G042200 Populus trichocarpa HOM05D000454 ORTHO05D002637 1.2e-13 81.3 174 56.3
PGR102G3036 Punica granatum HOM05D000454 ORTHO05D002637 1.2e-13 81.3 71 59.2
QL05p020689 Quercus lobata HOM05D000454 ORTHO05D002637 1.2e-13 81.3 70 54.3
Sopen08g020740 Solanum pennellii HOM05D000454 ORTHO05D002637 1.2e-13 81.3 182 61.0
CiPaw.01G233200 Carya illinoinensis HOM05D000454 ORTHO05D002637 1.5e-13 80.9 70 55.7
Lj3g0015079 Lotus japonicus HOM05D000454 ORTHO05D002637 1.5e-13 80.9 70 51.4
Manes.04G132001 Manihot esculenta HOM05D000454 ORTHO05D002637 1.5e-13 80.9 175 59.4
Prupe.3G061900 Prunus persica HOM05D000454 ORTHO05D002637 1.5e-13 80.9 70 50.0
QL05p020750 Quercus lobata HOM05D000454 ORTHO05D002637 1.5e-13 80.9 70 54.3
MBI04_g02616_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D002637 2.0e-13 80.5 69 55.1
Sabra18G0042900 Salix brachista HOM05D000454 ORTHO05D002637 2.0e-13 80.5 172 61.0
Glyma.15G018600 Glycine max HOM05D000454 ORTHO05D002637 2.6e-13 80.1 70 51.4
Lj8C577G8 Lonicera japonica HOM05D000454 ORTHO05D002637 3.4e-13 79.7 171 59.6
MD17G1186800 Malus domestica HOM05D000454 ORTHO05D002637 3.4e-13 79.7 69 56.5
Oeu031552.2 Olea europaea HOM05D000454 ORTHO05D002637 3.4e-13 79.7 174 59.2
arahy.Tifrunner.gnm1.ann1.VK618R Arachis hypogaea HOM05D000454 ORTHO05D002637 4.5e-13 79.3 73 47.9
QL05p020802 Quercus lobata HOM05D000454 ORTHO05D002637 4.5e-13 79.3 68 52.9
RcHm_v2.0_Chr2g0139761 Rosa chinensis HOM05D000454 ORTHO05D002637 4.5e-13 79.3 70 55.7
DCAR_007717 Daucus carota HOM05D000454 ORTHO05D002637 5.9e-13 79.0 176 60.8
Lj8C587G6 Lonicera japonica HOM05D000454 ORTHO05D002637 5.9e-13 79.0 171 60.2
Phvul.005G167300 Phaseolus vulgaris HOM05D000454 ORTHO05D002637 5.9e-13 79.0 70 48.6
arahy.Tifrunner.gnm1.ann1.2M4JN6 Arachis hypogaea HOM05D000454 ORTHO05D002637 7.7e-13 78.6 69 49.3
arahy.Tifrunner.gnm1.ann1.A9YK01 Arachis hypogaea HOM05D000454 ORTHO05D002637 7.7e-13 78.6 69 49.3
TAR626G1687 Trochodendron aralioides HOM05D000454 ORTHO05D002637 7.7e-13 78.6 173 59.0
Sc12g0009600 Simmondsia chinensis HOM05D000454 ORTHO05D002637 1.0e-12 78.2 173 31.2
Solyc08g066770.3 Solanum lycopersicum HOM05D000454 ORTHO05D002637 1.0e-12 78.2 179 62.0
Cfa003673 Carpinus fangiana HOM05D000454 ORTHO05D002637 1.3e-12 77.8 70 52.9
Medtr2g101310 Medicago truncatula HOM05D000454 ORTHO05D002637 1.3e-12 77.8 70 48.6
RcHm_v2.0_Chr2g0139911 Rosa chinensis HOM05D000454 ORTHO05D002637 1.3e-12 77.8 70 47.1
TAR636G2176 Trochodendron aralioides HOM05D000454 ORTHO05D002637 1.3e-12 77.8 173 58.4
FAN05G3697 Fragaria x ananassa HOM05D000454 ORTHO05D002637 1.7e-12 77.4 174 57.5
Prupe.3G061800 Prunus persica HOM05D000454 ORTHO05D002637 1.7e-12 77.4 171 56.1
FvH4_6g32091 Fragaria vesca HOM05D000454 ORTHO05D002637 2.2e-12 77.0 70 55.7
FvH4_6g32121 Fragaria vesca HOM05D000454 ORTHO05D002637 2.2e-12 77.0 70 50.0
FAN14G0896 Fragaria x ananassa HOM05D000454 ORTHO05D002637 2.2e-12 77.0 70 50.0
FAN14G5147 Fragaria x ananassa HOM05D000454 ORTHO05D002637 2.2e-12 77.0 70 55.7
arahy.Tifrunner.gnm1.ann1.N3KGB9 Arachis hypogaea HOM05D000454 ORTHO05D002637 2.9e-12 76.6 69 47.8
Cfa012703 Carpinus fangiana HOM05D000454 ORTHO05D002637 2.9e-12 76.6 68 48.5
FAN09G2279 Fragaria x ananassa HOM05D000454 ORTHO05D002637 2.9e-12 76.6 70 50.0
Sopen08g020730 Solanum pennellii HOM05D000454 ORTHO05D002637 3.8e-12 76.3 172 61.6
FAN14G2323 Fragaria x ananassa HOM05D000454 ORTHO05D002637 5.0e-12 75.9 171 28.7
RcHm_v2.0_Chr2g0139951 Rosa chinensis HOM05D000454 ORTHO05D002637 6.5e-12 75.5 171 56.1
THA.LOC104799197 Tarenaya hassleriana HOM05D000454 ORTHO05D002637 8.5e-12 75.1 183 56.3
CiPaw.02G147100 Carya illinoinensis HOM05D000454 ORTHO05D002637 1.1e-11 74.7 70 54.3
RcHm_v2.0_Chr2g0140011 Rosa chinensis HOM05D000454 ORTHO05D002637 1.1e-11 74.7 168 28.6
CiPaw.01G233300 Carya illinoinensis HOM05D000454 ORTHO05D002637 1.4e-11 74.3 70 48.6
MBI18_g43125_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D002637 1.4e-11 74.3 159 61.0
Thecc.09G043600 Theobroma cacao HOM05D000454 ORTHO05D002637 1.9e-11 73.9 70 45.7
FvH4_6g32123 Fragaria vesca HOM05D000454 ORTHO05D002637 4.2e-11 72.8 167 28.1
Hma1.2p1_0659F.1_g197370 Hydrangea macrophylla HOM05D000454 ORTHO05D002637 5.5e-11 72.4 127 77.2
Nn3g18158 Nelumbo nucifera HOM05D000454 ORTHO05D002637 5.5e-11 72.4 70 47.1
COL.COLO4_30480 Corchorus olitorius HOM05D000454 ORTHO05D002637 7.2e-11 72.0 71 47.9
Sed0021062 Sechium edule HOM05D000454 ORTHO05D002637 1.2e-10 71.2 69 47.8
PGSC0003DMG400012067 Solanum tuberosum HOM05D000454 ORTHO05D002637 1.2e-10 71.2 175 59.4
Ciclev10025077m.g Citrus clementina HOM05D000454 ORTHO05D002637 1.6e-10 70.9 70 54.3
Sed0022178 Sechium edule HOM05D000454 ORTHO05D002637 2.7e-10 70.1 176 53.4
Thecc.06G096900 Theobroma cacao HOM05D000454 ORTHO05D002637 2.7e-10 70.1 71 49.3
CsaV3_7G033580 Cucumis sativus L. HOM05D000454 ORTHO05D002637 4.7e-10 69.3 71 47.9
QL05p020666 Quercus lobata HOM05D000454 ORTHO05D002637 6.1e-10 68.9 157 63.1
ECA248G1005 Erigeron canadensis HOM05D000454 ORTHO05D002637 7.9e-10 68.6 70 45.7
MELO3C024269.2 Cucumis melo HOM05D000454 ORTHO05D002637 1.0e-09 68.2 71 47.9
Manes.16G072800 Manihot esculenta HOM05D000454 ORTHO05D002637 1.4e-09 67.8 178 54.5
Nitab4.5_0000151g0410 Nicotiana tabacum HOM05D000454 ORTHO05D002637 1.8e-09 67.4 70 41.4
Nitab4.5_0000837g0120 Nicotiana tabacum HOM05D000454 ORTHO05D002637 2.3e-09 67.0 70 41.4
GSVIVG01035671001 Vitis vinifera HOM05D000454 ORTHO05D002637 2.3e-09 67.0 70 45.7
Oeu012195.1 Olea europaea HOM05D000454 ORTHO05D002637 5.1e-09 65.9 70 42.9
PSO566G0187 Papaver somniferum HOM05D000454 ORTHO05D002637 2.0e-08 63.9 71 45.1
Cpa.g.sc7.265 Carica papaya HOM05D000454 ORTHO05D002637 3.3e-08 63.2 70 42.9
PSO782G3005 Papaver somniferum HOM05D000454 ORTHO05D002637 3.3e-08 63.2 69 46.4
Solyc08g066760.4 Solanum lycopersicum HOM05D000454 ORTHO05D002637 3.3e-08 63.2 154 62.3
Lsat_1_v5_gn_4_101061 Lactuca sativa HOM05D000454 ORTHO05D002637 2.2e-07 60.5 170 40.6
Lj8C577G4 Lonicera japonica HOM05D000454 ORTHO05D002637 2.2e-07 60.5 67 43.3
Lj8C586G6 Lonicera japonica HOM05D000454 ORTHO05D002637 2.8e-07 60.1 67 41.8
RcHm_v2.0_Chr2g0140001 Rosa chinensis HOM05D000454 ORTHO05D002637 2.8e-07 60.1 65 44.6
GSVIVG01017031001 Vitis vinifera HOM05D000454 ORTHO05D002637 2.8e-07 60.1 173 58.4
Atru.chr1.3486 Acer truncatum HOM05D000454 ORTHO05D002637 4.8e-07 59.3 50 56.0
SEGI_23263 Sequoiadendron giganteum HOM05D000454 ORTHO05D002637 4.8e-07 59.3 176 52.8
ATR0705G199 Amborella trichopoda HOM05D034033 ORTHO05D023440 8.2e-07 58.5 69 42.0
PGSC0003DMG400004319 Solanum tuberosum HOM05D000454 ORTHO05D002637 1.4e-06 57.8 69 40.6
AT1G10340 Arabidopsis thaliana HOM05D000454 ORTHO05D002637 1.8e-06 57.4 67 40.3
ClCG09G001750 Citrullus lanatus HOM05D000454 ORTHO05D002637 1.8e-06 57.4 50 48.0
HanXRQChr09g0275901 Helianthus annuus HOM05D000454 ORTHO05D002637 1.8e-06 57.4 171 54.4
Sp2g30100 Schrenkiella parvula HOM05D000454 ORTHO05D002637 2.4e-06 57.0 69 40.6
Sp1g08940 Schrenkiella parvula HOM05D000454 ORTHO05D002637 3.1e-06 56.6 67 40.3
Lsat_1_v5_gn_4_99840 Lactuca sativa HOM05D000454 ORTHO05D002637 5.3e-06 55.8 67 41.8
PGSC0003DMG400004320 Solanum tuberosum HOM05D000454 ORTHO05D030671 5.3e-06 55.8 69 39.1
AL1G21080 Arabidopsis lyrata HOM05D000454 ORTHO05D002637 7.0e-06 55.5 67 38.8


User provided reference genes

Program Settings