Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 5.7e-275 950.3 477 100.0
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 2.1e-168 596.3 462 68.6
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 3.6e-168 595.5 462 68.6
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 6.3e-165 584.7 459 65.4
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.5e-158 563.5 467 63.4
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 9.8e-158 560.8 466 63.5
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 1.9e-153 546.6 466 65.0
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 3.2e-140 502.7 476 58.4
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 2.1e-139 500.0 477 58.5
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 1.5e-137 493.8 486 57.0
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 8.4e-133 478.0 479 55.9
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 3.3e-129 466.1 407 60.0
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 2.1e-128 463.4 483 55.3
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 3.8e-125 452.6 498 53.0
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 4.9e-125 452.2 472 53.2
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 4.9e-125 452.2 471 53.5
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 7.1e-124 448.4 413 58.1
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 1.2e-123 447.6 448 58.5
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 2.7e-123 446.4 480 53.8
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 7.8e-123 444.9 481 54.5
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 6.6e-122 441.8 469 56.3
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 4.0e-119 432.6 488 53.3
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 2.3e-114 416.8 482 51.5
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 2.8e-112 409.8 477 50.3
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 9.0e-111 404.8 477 52.0
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 4.5e-110 402.5 474 51.1
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 2.1e-107 393.7 485 50.1
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 1.3e-106 391.0 464 48.7
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 3.0e-106 389.8 476 49.4
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 4.3e-105 386.0 466 50.4
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 9.6e-105 384.8 499 49.1
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 6.2e-104 382.1 501 48.7
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 6.2e-104 382.1 486 48.1
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 8.1e-104 381.7 471 47.3
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 2.6e-102 376.7 393 51.7
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 3.8e-101 372.9 483 49.1
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 4.9e-101 372.5 491 45.2
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 6.5e-101 372.1 492 47.0
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 8.4e-101 371.7 474 48.1
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 7.1e-100 368.6 500 48.0
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 7.9e-99 365.2 488 47.1
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 1.1e-97 361.3 484 48.3
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 1.5e-97 360.9 484 48.3
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 7.4e-97 358.6 471 49.3
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 1.6e-96 357.5 495 45.7
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 4.8e-96 355.9 506 45.8
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 2.4e-95 353.6 473 47.1
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 9.0e-95 351.7 512 45.9
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 3.8e-93 346.3 469 47.1
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 1.1e-92 344.7 458 48.0
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.1e-92 344.7 489 45.8
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 3.2e-92 343.2 528 43.0
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 9.3e-92 341.7 483 46.2
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 2.1e-91 340.5 474 47.0
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 2.7e-91 340.1 425 47.3
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 3.6e-91 339.7 522 43.5
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 6.7e-90 335.5 477 43.6
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 1.9e-89 334.0 525 43.8
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 1.3e-88 331.3 503 42.3
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 2.2e-88 330.5 462 44.8
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 9.1e-87 325.1 525 43.0
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 7.2e-84 315.5 487 45.4
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.2e-83 314.7 502 42.6
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 1.6e-83 314.3 446 46.0
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 1.8e-82 310.8 484 41.7
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 3.0e-82 310.1 462 43.9
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 6.7e-82 308.9 475 45.1
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 2.6e-81 307.0 468 44.2
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 3.3e-81 306.6 482 45.2
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 2.8e-80 303.5 430 44.9
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 1.2e-78 298.1 428 46.5
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 1.2e-78 298.1 428 46.5
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 2.6e-78 297.0 484 43.0
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 1.3e-77 294.7 455 41.5
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 3.2e-76 290.0 440 43.0
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 4.2e-76 289.7 490 42.9
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.7e-75 287.0 490 42.9
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 5.2e-74 282.7 358 47.2
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 1.3e-72 278.1 475 40.4
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 2.8e-72 276.9 490 38.8
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 3.7e-72 276.6 413 44.1
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 5.3e-71 272.7 486 41.2
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 2.6e-70 270.4 227 63.0
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 1.3e-69 268.1 417 41.2
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 3.8e-69 266.5 488 40.8
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 3.2e-68 263.5 447 41.2
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 7.2e-68 262.3 436 42.4
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 2.1e-67 260.8 484 39.7
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 3.6e-67 260.0 452 40.3
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 1.4e-66 258.1 446 39.5
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 3.0e-66 256.9 455 37.8
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 5.7e-65 252.7 443 38.4
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 2.2e-64 250.8 408 42.4
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 2.8e-64 250.4 459 38.6
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 3.8e-61 240.0 488 38.9
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 3.6e-59 233.4 444 36.7
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 3.0e-58 230.3 442 36.4
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 2.2e-56 224.2 436 38.1
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 1.1e-55 221.9 427 37.9
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 5.4e-55 219.5 419 39.1
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 5.4e-55 219.5 419 39.1
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 5.4e-55 219.5 419 39.1
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 5.4e-55 219.5 458 37.1
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 3.5e-54 216.9 448 37.7
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 3.5e-46 190.3 406 35.7
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 1.0e-42 178.7 242 43.0
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 4.0e-42 176.8 260 41.5
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 1.7e-40 171.4 471 29.5
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 2.9e-24 117.5 494 25.9
Actinidia32099 Actinidia chinensis HOM05D006741 ORTHO05D008434 6.4e-24 116.3 464 27.8
unitig_748.g7441 Utricularia gibba HOM05D006741 ORTHO05D008434 8.3e-24 115.9 263 36.5
BcaC01g04588 Brassica carinata HOM05D006741 ORTHO05D008434 3.0e-21 107.5 274 33.9
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 4.0e-18 97.1 192 38.5
Dinv11548 Davidia involucrata HOM05D065926 ORTHO05D008434 2.6e-17 94.4 64 81.2
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 1.5e-12 78.6 128 37.5
CDE04G1568 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 9.6e-12 75.9 85 48.2
ECA234G0697 Erigeron canadensis HOM05D006741 ORTHO05D008434 1.6e-11 75.1 111 44.1
C03p36010 Brassica napus HOM05D006741 ORTHO05D008434 2.0e-09 68.2 57 59.6
BolC3t15911H Brassica oleracea HOM05D006741 ORTHO05D008434 2.0e-09 68.2 57 59.6
Mapoly0006s0242 Marchantia polymorpha HOM05D024617 ORTHO05D023508 2.4e-07 61.2 433 25.6


User provided reference genes

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