Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 1.9e-56 222.2 108 100.0
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 4.1e-19 98.2 78 64.1
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 1.5e-18 96.3 90 62.2
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.3e-17 93.2 79 69.6
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 3.8e-17 91.7 51 84.3
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 8.5e-17 90.5 80 63.8
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.4e-16 89.7 79 64.6
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 1.4e-16 89.7 80 60.0
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 1.4e-16 89.7 78 56.4
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 2.5e-16 89.0 69 66.7
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 3.2e-16 88.6 60 68.3
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 8.0e-15 84.0 78 56.4
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 3.9e-14 81.6 70 61.4
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 3.9e-14 81.6 54 75.9
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 3.9e-14 81.6 53 69.8
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.1e-13 80.1 70 60.0
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 1.5e-13 79.7 70 60.0
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 2.0e-13 79.3 48 79.2
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 2.6e-13 79.0 70 61.4
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 4.4e-13 78.2 70 60.0
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 1.3e-12 76.6 75 58.7
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.7e-12 76.3 73 60.3
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 2.8e-12 75.5 71 49.3
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 2.8e-12 75.5 42 83.3
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 3.7e-12 75.1 59 61.0
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 3.7e-12 75.1 71 54.9
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 3.7e-12 75.1 70 58.6
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 6.3e-12 74.3 70 57.1
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 8.2e-12 73.9 70 60.0
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 8.2e-12 73.9 77 53.2
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 8.2e-12 73.9 50 72.0
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 1.1e-11 73.6 70 60.0
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 2.4e-11 72.4 53 62.3
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 3.1e-11 72.0 76 56.6
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 5.3e-11 71.2 71 53.5
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 2.6e-10 68.9 70 55.7
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 3.5e-10 68.6 71 56.3
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 3.5e-10 68.6 71 53.5
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 5.9e-10 67.8 72 52.8
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 5.9e-10 67.8 72 56.9
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 1.3e-09 66.6 71 49.3
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.7e-09 66.2 71 54.9
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 2.2e-09 65.9 72 55.6
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 2.9e-09 65.5 72 52.8
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 3.8e-09 65.1 74 51.4
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 8.5e-09 63.9 51 62.7
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 1.1e-08 63.5 72 52.8
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 1.5e-08 63.2 51 62.7
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 3.2e-08 62.0 72 47.2
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 4.2e-08 61.6 51 60.8
arahy.Tifrunner.gnm1.ann1.4P5WGY Arachis hypogaea HOM05D008135 ORTHO05D010260 2.7e-07 58.9 72 48.6
Sc12g0009960 Simmondsia chinensis HOM05D008135 ORTHO05D010260 1.0e-06 57.0 54 53.7
MBI01_g16574_MAGBIO Magnolia biondii HOM05D008135 ORTHO05D010260 1.8e-06 56.2 70 48.6
arahy.Tifrunner.gnm1.ann1.7STU2J Arachis hypogaea HOM05D008135 ORTHO05D010260 2.3e-06 55.8 72 47.2
ClCG09G000520 Citrullus lanatus HOM05D008135 ORTHO05D010260 2.3e-06 55.8 72 43.1
Atru.chr1.3625 Acer truncatum HOM05D008135 ORTHO05D010260 5.2e-06 54.7 74 44.6
CsaV3_7G034940 Cucumis sativus L. HOM05D008135 ORTHO05D010260 5.2e-06 54.7 72 45.8
Nn8g38941 Nelumbo nucifera HOM05D008135 ORTHO05D010260 6.7e-06 54.3 61 50.8
Os01g0558700 Oryza sativa ssp. japonica HOM05D008135 ORTHO05D010260 8.8e-06 53.9 56 51.8


User provided reference genes

Program Settings