Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 6.4e-164 580.9 332 100.0
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 1.3e-116 423.7 343 72.9
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 7.4e-112 407.9 341 68.9
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 8.2e-111 404.4 244 82.8
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 3.1e-110 402.5 334 68.6
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 3.2e-107 392.5 240 82.9
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 5.5e-107 391.7 242 82.6
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 1.2e-106 390.6 258 78.3
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 2.1e-106 389.8 339 67.0
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 2.1e-106 389.8 247 82.6
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 3.6e-106 389.0 256 80.5
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 4.6e-106 388.7 250 78.8
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 7.9e-106 387.9 253 78.3
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 1.5e-104 383.6 257 77.0
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 2.5e-104 382.9 256 78.5
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.7e-103 380.2 249 77.5
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 1.7e-103 380.2 250 79.6
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 2.8e-103 379.4 260 76.9
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 3.7e-103 379.0 257 77.8
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 3.7e-103 379.0 352 64.2
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 6.3e-103 378.3 260 76.5
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.4e-102 377.1 249 77.1
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 2.4e-102 376.3 250 73.6
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 3.1e-102 375.9 254 76.4
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 5.3e-102 375.2 222 85.1
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 5.3e-102 375.2 349 64.8
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 6.9e-102 374.8 220 82.3
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 1.5e-101 373.6 248 76.2
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 1.5e-101 373.6 250 74.8
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 3.4e-101 372.5 249 77.9
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 4.5e-101 372.1 256 73.4
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 5.9e-101 371.7 247 76.5
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 1.0e-100 370.9 248 75.4
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 1.7e-100 370.2 247 74.5
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 5.0e-100 368.6 220 82.3
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 1.1e-99 367.5 218 82.1
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 1.4e-99 367.1 239 77.4
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 2.5e-99 366.3 340 66.8
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 5.5e-99 365.2 246 74.8
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 1.2e-98 364.0 219 81.7
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 1.6e-98 363.6 204 88.7
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 2.1e-98 363.2 336 63.7
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 3.6e-98 362.5 221 82.8
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 4.7e-98 362.1 217 81.1
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 7.9e-98 361.3 225 76.0
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 7.9e-98 361.3 243 79.4
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 3.9e-97 359.0 250 72.4
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 1.1e-96 357.5 220 80.0
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 1.1e-96 357.5 215 85.1
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 2.6e-96 356.3 214 81.8
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 3.3e-96 355.9 220 78.2
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 5.7e-96 355.1 243 75.7
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 2.8e-95 352.8 334 60.8
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 3.7e-95 352.4 336 63.7
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 4.1e-94 349.0 313 62.6
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 6.9e-94 348.2 336 60.7
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 2.6e-93 346.3 207 78.7
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 3.8e-92 342.4 364 56.6
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 3.8e-92 342.4 242 70.2
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 1.4e-91 340.5 224 79.0
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 2.5e-91 339.7 262 70.6
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 2.7e-90 336.3 198 84.8
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 1.0e-89 334.3 332 57.5
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 1.0e-89 334.3 266 68.4
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 3.0e-89 332.8 218 75.2
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 8.8e-89 331.3 321 59.2
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 5.7e-88 328.6 209 75.1
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 2.4e-86 323.2 222 72.5
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 2.4e-86 323.2 196 81.6
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 5.3e-86 322.0 259 62.5
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 1.2e-85 320.9 197 79.2
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 2.0e-85 320.1 223 74.0
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 2.6e-85 319.7 255 64.3
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 2.6e-85 319.7 196 81.1
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 3.5e-85 319.3 314 59.9
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 1.3e-84 317.4 174 89.1
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 2.9e-84 316.2 196 76.0
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 3.2e-83 312.8 176 85.2
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 1.6e-82 310.5 341 51.3
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 2.6e-80 303.1 222 67.6
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 4.4e-80 302.4 238 62.2
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 1.7e-79 300.4 261 63.2
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 1.1e-78 297.7 214 67.8
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 1.2e-77 294.3 216 70.8
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 4.5e-77 292.4 213 70.4
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 1.3e-76 290.8 213 66.7
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 3.8e-76 289.3 204 66.7
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 8.5e-76 288.1 216 69.0
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 2.5e-75 286.6 228 64.0
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 2.5e-75 286.6 219 66.2
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 9.8e-72 274.6 208 63.0
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 4.2e-67 259.2 330 47.0
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 9.5e-67 258.1 342 52.9
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.6e-66 257.3 266 54.5
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.6e-66 257.3 266 54.5
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 1.3e-63 247.7 197 61.9
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 8.3e-63 245.0 151 78.8
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 2.0e-61 240.4 179 68.2
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 5.9e-61 238.8 145 75.9
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.6e-58 230.7 207 60.9
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 1.4e-57 227.6 168 66.7
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 8.9e-57 224.9 161 71.4
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.2e-56 224.6 160 71.9
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 1.5e-56 224.2 263 47.1
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 1.1e-54 218.0 151 73.5
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 1.6e-53 214.2 215 52.1
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 2.1e-50 203.8 231 48.1
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 1.9e-46 190.7 134 72.4
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 5.4e-46 189.1 192 53.1
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 3.9e-44 183.0 216 51.4
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 5.8e-40 169.1 90 92.2
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 7.1e-38 162.2 90 87.8
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 4.6e-37 159.5 90 85.6
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 9.0e-25 118.6 69 88.4
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 1.5e-24 117.9 233 33.0
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 2.4e-22 110.5 154 43.5
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 2.7e-21 107.1 62 87.1
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 8.1e-18 95.5 167 32.9
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 3.1e-17 93.6 177 33.9
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 1.3e-12 78.2 48 83.3
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 3.0e-12 77.0 48 85.4
MBI06_g33106_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 5.6e-11 72.8 67 56.7
ATR0138G010 Amborella trichopoda HOM05D006516 ORTHO05D008083 2.9e-07 60.5 37 89.2


User provided reference genes

Program Settings