Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30334 Davidia involucrata HOM05D008049 ORTHO05D010198 5.9e-167 590.9 319 100.0
Hma1.2p1_0134F.1_g061550 Hydrangea macrophylla HOM05D008049 ORTHO05D010198 5.7e-93 345.1 327 63.0
TAR381G0470 Trochodendron aralioides HOM05D008049 ORTHO05D010198 5.7e-93 345.1 320 65.0
Actinidia16520 Actinidia chinensis HOM05D008049 ORTHO05D010198 8.2e-92 341.3 323 66.3
QL10p040433 Quercus lobata HOM05D008049 ORTHO05D010198 7.2e-88 328.2 330 62.4
CiPaw.03G116500 Carya illinoinensis HOM05D008049 ORTHO05D010198 2.5e-85 319.7 326 57.1
Cpa.g.sc37.30 Carica papaya HOM05D008049 ORTHO05D010198 3.7e-84 315.8 327 58.4
Prupe.4G279900 Prunus persica HOM05D008049 ORTHO05D010198 1.0e-81 307.8 320 61.2
MD15G1137300 Malus domestica HOM05D008049 ORTHO05D010198 2.7e-79 299.7 327 59.9
TWI31G1063 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 6.9e-75 285.0 331 54.4
AT5G08770 Arabidopsis thaliana HOM05D008049 ORTHO05D010198 9.1e-75 284.6 328 52.4
AL6G19520 Arabidopsis lyrata HOM05D008049 ORTHO05D010198 1.7e-73 280.4 322 53.4
THA.LOC104818414 Tarenaya hassleriana HOM05D008049 ORTHO05D010198 3.8e-73 279.3 323 57.0
DCAR_013179 Daucus carota HOM05D008049 ORTHO05D010198 8.5e-73 278.1 323 51.7
Sp6g34110 Schrenkiella parvula HOM05D008049 ORTHO05D010198 1.1e-72 277.7 326 53.4
TWI79G0517 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 1.1e-72 277.7 331 52.3
PSO528G0188 Papaver somniferum HOM05D008049 ORTHO05D010198 1.9e-72 276.9 252 61.1
CARHR204240 Cardamine hirsuta HOM05D008049 ORTHO05D010198 1.6e-71 273.9 322 51.9
Atru.chr4.1095 Acer truncatum HOM05D008049 ORTHO05D010198 2.7e-71 273.1 323 52.6
Atru.chr4.1100 Acer truncatum HOM05D008049 ORTHO05D010198 2.7e-71 273.1 323 52.6
Ciclev10002216m.g Citrus clementina HOM05D008049 ORTHO05D010198 2.7e-71 273.1 320 54.1
Aa31LG3G17800 Aethionema arabicum HOM05D008049 ORTHO05D010198 3.6e-71 272.7 322 50.3
Potri.005G069900 Populus trichocarpa HOM05D008049 ORTHO05D010198 3.6e-71 272.7 324 52.5
Nn5g28352 Nelumbo nucifera HOM05D008049 ORTHO05D010198 1.4e-70 270.8 303 57.8
Thhalv10014201m.g Eutrema salsugineum HOM05D008049 ORTHO05D010198 3.0e-70 269.6 324 51.9
C09p68210 Brassica napus HOM05D008049 ORTHO05D010198 9.7e-69 264.6 332 50.9
Carub.0006s0774 Capsella rubella HOM05D008049 ORTHO05D010198 1.7e-68 263.8 328 50.6
BolC9t59570H Brassica oleracea HOM05D008049 ORTHO05D010198 2.8e-68 263.1 332 50.6
Sc09g0002140 Simmondsia chinensis HOM05D008049 ORTHO05D010198 4.8e-68 262.3 351 53.3
A10p28010 Brassica napus HOM05D008049 ORTHO05D010198 1.1e-67 261.2 333 50.2
PSO170G0957 Papaver somniferum HOM05D008049 ORTHO05D010198 2.4e-67 260.0 248 61.3
BraA10t44851Z Brassica rapa HOM05D008049 ORTHO05D010198 1.2e-66 257.7 333 50.2
RcHm_v2.0_Chr2g0123171 Rosa chinensis HOM05D008049 ORTHO05D010198 1.6e-66 257.3 329 51.4
PGR102G0265 Punica granatum HOM05D008049 ORTHO05D010198 7.7e-66 255.0 328 48.8
BcaB08g37227 Brassica carinata HOM05D008049 ORTHO05D010198 1.9e-64 250.4 331 51.1
Lj1g0009929 Lotus japonicus HOM05D008049 ORTHO05D010198 1.9e-64 250.4 321 52.0
Glyma.04G208100 Glycine max HOM05D008049 ORTHO05D010198 1.4e-62 244.2 323 49.8
Thecc.01G140900 Theobroma cacao HOM05D008049 ORTHO05D010198 5.2e-62 242.3 321 54.8
Duzib187G0110 Durio zibethinus HOM05D008049 ORTHO05D010198 8.8e-62 241.5 321 49.2
Duzib147G0405 Durio zibethinus HOM05D008049 ORTHO05D010198 2.0e-61 240.4 326 49.7
arahy.Tifrunner.gnm1.ann1.WZNZ1Z Arachis hypogaea HOM05D008049 ORTHO05D010198 5.7e-61 238.8 334 48.8
arahy.Tifrunner.gnm1.ann1.M4SWJY Arachis hypogaea HOM05D008049 ORTHO05D010198 2.2e-60 236.9 333 50.2
Glyma.06G157600 Glycine max HOM05D008049 ORTHO05D010198 3.7e-60 236.1 321 51.4
Medtr3g096940 Medicago truncatula HOM05D008049 ORTHO05D010198 3.7e-60 236.1 320 50.6
Gorai.012G037400 Gossypium raimondii HOM05D008049 ORTHO05D010198 6.3e-60 235.3 255 56.5
FAN26G0656 Fragaria x ananassa HOM05D008049 ORTHO05D010198 8.2e-60 235.0 324 51.5
FAN26G2415 Fragaria x ananassa HOM05D008049 ORTHO05D010198 8.2e-60 235.0 324 51.5
Phvul.009G152600 Phaseolus vulgaris HOM05D008049 ORTHO05D010198 1.1e-59 234.6 322 50.3
FvH4_1g25250 Fragaria vesca HOM05D008049 ORTHO05D010198 1.4e-59 234.2 323 51.1
FAN19G2909 Fragaria x ananassa HOM05D008049 ORTHO05D010198 6.5e-57 225.3 322 50.9
VMungo1309G0538 Vigna mungo HOM05D008049 ORTHO05D010198 2.1e-55 220.3 321 53.0
Migut.H00830 Erythranthe guttata HOM05D008049 ORTHO05D010198 1.3e-52 211.1 326 46.6
Lalb_Chr08g0238031 Lupinus albus HOM05D008049 ORTHO05D010198 7.0e-51 205.3 237 54.9
COL.COLO4_12107 Corchorus olitorius HOM05D008049 ORTHO05D010198 2.1e-47 193.7 171 63.2
EL10Ac4g09675 Beta vulgaris HOM05D008049 ORTHO05D010198 1.2e-45 188.0 272 46.7
unitig_899.g15147 Utricularia gibba HOM05D008049 ORTHO05D010198 1.5e-45 187.6 226 48.2
Gohir.A05G382200 Gossypium hirsutum HOM05D008049 ORTHO05D010198 9.5e-40 168.3 251 42.2
Gohir.D04G033000 Gossypium hirsutum HOM05D008049 ORTHO05D010198 2.8e-39 166.8 251 41.8
AUR62006889 Chenopodium quinoa HOM05D008049 ORTHO05D010198 1.5e-37 161.0 175 52.6
MD15G1137000 Malus domestica HOM05D008049 ORTHO05D010198 3.2e-35 153.3 158 56.3
Sabra05G0056900 Salix brachista HOM05D008049 ORTHO05D010198 6.2e-31 139.0 120 61.7
Nitab4.5_0000905g0120 Nicotiana tabacum HOM05D008049 ORTHO05D010198 8.0e-31 138.7 188 48.4
CDE04G3132 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 2.3e-30 137.1 309 33.3
CDE07G0304 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 3.7e-28 129.8 291 35.4
MBI06_g26010_MAGBIO Magnolia biondii HOM05D008049 ORTHO05D010198 6.2e-23 112.5 172 41.9
TPR.G7867 Trifolium pratense HOM05D008049 ORTHO05D010198 1.1e-22 111.7 184 47.8
SGA_v2.0_scaffold20G08957 Striga asiatica HOM05D008049 ORTHO05D010198 4.4e-21 106.3 117 51.3
Psat5g058560 Pisum sativum HOM05D008049 ORTHO05D010198 5.8e-21 105.9 99 59.6
AUR62000540 Chenopodium quinoa HOM05D008049 ORTHO05D010198 2.3e-17 94.0 100 55.0
Ca_16998_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 8.6e-09 65.5 58 65.5
Ca_17026_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 8.6e-09 65.5 58 65.5
arahy.Tifrunner.gnm1.ann1.P087XE Arachis hypogaea HOM05D008049 ORTHO05D010198 8.1e-07 58.9 65 55.4
Peaxi162Scf00925g00015 Petunia axillaris HOM05D008049 ORTHO05D010198 1.4e-06 58.2 92 37.0


User provided reference genes

Program Settings