Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 8.2e-271 936.4 456 100.0
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 3.6e-218 761.5 444 82.2
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 3.0e-204 715.3 457 76.6
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 2.8e-202 708.8 428 77.3
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 8.9e-201 703.7 436 77.8
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.2e-200 703.4 446 76.2
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 5.8e-200 701.0 451 74.9
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 3.8e-199 698.4 432 78.2
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 8.4e-199 697.2 451 73.6
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 3.5e-197 691.8 451 74.5
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.3e-196 689.9 436 76.4
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 1.3e-196 689.9 449 74.6
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 1.7e-196 689.5 428 77.6
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 5.1e-196 688.0 428 76.2
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 8.7e-196 687.2 428 76.2
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 2.5e-195 685.6 453 73.3
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.6e-194 682.9 434 75.1
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.6e-194 682.9 427 75.2
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 6.2e-194 681.0 443 74.0
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 1.1e-193 680.2 446 72.6
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 4.5e-192 674.9 443 73.4
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 2.9e-191 672.2 399 78.7
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 7.1e-190 667.5 434 72.8
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.7e-189 665.6 449 72.2
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 4.6e-189 664.8 430 75.1
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 1.0e-188 663.7 434 74.4
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 4.8e-186 654.8 427 71.9
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.2e-186 654.4 434 73.3
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 6.2e-186 654.4 428 72.9
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 1.4e-185 653.3 427 71.9
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 2.6e-184 649.0 403 75.7
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 9.9e-184 647.1 434 73.0
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.3e-183 646.7 428 72.2
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 1.7e-183 646.4 435 71.3
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 3.8e-183 645.2 434 71.2
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 4.9e-183 644.8 451 70.1
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 4.2e-182 641.7 456 67.5
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 2.1e-181 639.4 448 68.3
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 3.5e-181 638.6 449 69.5
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 3.5e-181 638.6 446 70.9
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 7.9e-181 637.5 451 69.0
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.3e-180 636.0 435 73.8
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 2.3e-180 636.0 408 72.1
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 5.1e-180 634.8 432 71.3
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 6.7e-180 634.4 432 70.8
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.9e-179 632.9 440 69.3
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 5.6e-179 631.3 421 71.0
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 3.7e-178 628.6 434 69.4
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 3.7e-178 628.6 444 67.8
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 6.2e-178 627.9 425 69.2
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 3.1e-177 625.5 444 67.6
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 3.1e-177 625.5 436 67.7
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 1.5e-176 623.2 432 68.8
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 7.6e-176 620.9 430 68.4
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.3e-175 620.2 438 67.4
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 2.9e-175 619.0 432 67.8
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 6.5e-175 617.8 416 69.7
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 6.5e-175 617.8 444 65.8
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 1.4e-174 616.7 444 66.2
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 7.1e-174 614.4 447 66.4
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 9.3e-174 614.0 444 66.7
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 3.5e-173 612.1 416 69.0
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.3e-170 603.6 382 75.1
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.6e-170 603.2 427 69.6
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 2.6e-168 595.9 425 65.9
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.3e-167 593.6 456 65.6
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.2e-166 589.0 449 66.1
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.7e-165 585.9 424 65.8
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 3.6e-165 585.5 456 60.7
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 7.9e-165 584.3 436 64.9
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.5e-163 580.1 443 65.2
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 7.4e-163 577.8 439 64.7
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 7.4e-163 577.8 396 68.4
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.1e-161 570.9 430 68.6
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 3.9e-156 555.4 449 63.7
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-155 553.9 421 68.6
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 2.6e-155 552.7 452 64.8
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 4.8e-154 548.5 432 63.0
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 4.1e-153 545.4 454 63.0
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 5.3e-153 545.0 356 76.7
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-149 533.9 395 68.9
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 6.1e-149 531.6 407 62.9
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 1.3e-146 523.9 402 64.2
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 3.7e-146 522.3 338 73.4
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 7.2e-142 508.1 406 59.1
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 4.4e-139 498.8 316 70.3
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 9.7e-139 497.7 349 70.2
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 1.2e-136 490.7 413 55.9
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 3.5e-136 489.2 421 56.5
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 4.8e-130 468.8 420 54.3
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 7.0e-129 464.9 334 67.4
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 2.9e-127 459.5 337 65.0
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 4.4e-115 419.1 424 50.2
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.9e-106 389.8 228 78.1
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 3.2e-97 359.8 218 76.6
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 5.8e-91 339.0 198 80.8
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 3.2e-89 333.2 241 68.9
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 4.6e-72 276.2 246 60.2
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.6e-62 242.7 130 88.5
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.6e-62 242.7 130 88.5
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 9.3e-57 225.3 386 36.0
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 2.1e-56 224.2 164 66.5
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 5.3e-52 209.5 112 91.1
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 2.0e-43 181.0 337 35.0
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 7.7e-43 179.1 135 64.4
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 9.4e-41 172.2 161 56.5
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.7e-38 162.2 171 55.6
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.7e-38 162.2 171 55.6
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.1e-33 148.7 70 98.6
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 2.8e-21 107.5 63 73.0
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 5.3e-20 103.2 76 69.7
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 1.2e-14 85.5 235 31.1
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 7.5e-14 82.8 207 30.4
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.7e-13 81.6 207 29.5
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 1.1e-12 79.0 526 20.3
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.7e-10 71.6 75 45.3
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 6.8e-07 59.7 77 39.0


User provided reference genes

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