Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30298 Davidia involucrata HOM05D000448 ORTHO05D000291 1.5e-104 382.9 190 100.0
CSS0043523 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 3.9e-17 92.4 125 40.8
Rhsim03G0059800 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.2e-13 80.9 131 38.2
Dinv37881 Davidia involucrata HOM05D000448 ORTHO05D000291 1.5e-13 80.5 121 40.5
CSS0035404 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 3.4e-13 79.3 120 39.2
CSS0038637 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 7.7e-13 78.2 120 40.0
Cfa019709 Carpinus fangiana HOM05D000448 ORTHO05D000291 2.9e-12 76.3 122 36.1
Rhsim02G0230700 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.9e-11 73.6 199 28.1
Rhsim11G0060000 Rhododendron simsii HOM05D000448 ORTHO05D000291 5.5e-11 72.0 122 35.2
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 5.5e-11 72.0 124 40.3
Rhsim12G0208400 Rhododendron simsii HOM05D001920 ORTHO05D000291 7.2e-11 71.6 121 39.7
Rhsim02G0103800 Rhododendron simsii HOM05D000448 ORTHO05D000291 9.4e-11 71.2 121 38.0
Rhsim03G0061100 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.2e-10 70.9 127 35.4
TAR121G0001 Trochodendron aralioides HOM05D000448 ORTHO05D000291 1.2e-10 70.9 122 35.2
vmacro10493 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 2.1e-10 70.1 74 52.7
RhsimUnG0112900 Rhododendron simsii HOM05D003997 ORTHO05D002698 2.7e-10 69.7 124 34.7
Rhsim03G0061600 Rhododendron simsii HOM05D003997 ORTHO05D002698 4.7e-10 68.9 120 35.0
vmacro17436 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.4e-09 67.4 125 38.4
TAR626G0633 Trochodendron aralioides HOM05D000448 ORTHO05D000291 1.8e-09 67.0 122 33.6
Cfa019724 Carpinus fangiana HOM05D000448 ORTHO05D000291 3.0e-09 66.2 110 33.6
vmacro20893 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.9e-09 65.9 122 37.7
HanXRQChr16g0523051 Helianthus annuus HOM05D000448 ORTHO05D000291 8.8e-09 64.7 64 50.0
HanXRQChr16g0523061 Helianthus annuus HOM05D000448 ORTHO05D000291 1.1e-08 64.3 64 50.0
COL.COLO4_00210 Corchorus olitorius HOM05D000448 ORTHO05D000291 1.5e-08 63.9 75 40.0
Lsat_1_v5_gn_5_31161 Lactuca sativa HOM05D000448 ORTHO05D000291 2.0e-08 63.5 151 30.5
CSS0023638 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.6e-08 63.2 127 31.5
Cfa007125 Carpinus fangiana HOM05D000448 ORTHO05D000291 2.6e-08 63.2 120 33.3
HanXRQChr16g0523041 Helianthus annuus HOM05D000448 ORTHO05D000291 2.6e-08 63.2 67 43.3
TAR626G0212 Trochodendron aralioides HOM05D003596 ORTHO05D004256 3.3e-08 62.8 105 33.3
QL05p009022 Quercus lobata HOM05D000448 ORTHO05D000291 4.4e-08 62.4 62 46.8
arahy.Tifrunner.gnm1.ann1.FECP0X Arachis hypogaea HOM05D000448 ORTHO05D000291 7.4e-08 61.6 122 29.5
Cfa018491 Carpinus fangiana HOM05D000448 ORTHO05D000291 1.3e-07 60.8 62 50.0
HanXRQChr02g0058091 Helianthus annuus HOM05D000448 ORTHO05D000291 1.7e-07 60.5 74 36.5
TAR479G0002 Trochodendron aralioides HOM05D000448 ORTHO05D000291 1.7e-07 60.5 58 53.4
CiPaw.03G111600 Carya illinoinensis HOM05D000448 ORTHO05D000291 2.8e-07 59.7 124 35.5
CiPaw.03G111800 Carya illinoinensis HOM05D000448 ORTHO05D000291 2.8e-07 59.7 126 31.0
Lsat_1_v5_gn_5_29501 Lactuca sativa HOM05D000448 ORTHO05D000291 2.8e-07 59.7 100 35.0
CiPaw.03G110600 Carya illinoinensis HOM05D000448 ORTHO05D000291 3.7e-07 59.3 124 35.5
Lj1A658G6 Lonicera japonica HOM05D000448 ORTHO05D000291 3.7e-07 59.3 122 33.6
CiPaw.03G112400 Carya illinoinensis HOM05D000448 ORTHO05D000291 6.3e-07 58.5 127 29.9
vmacro17041 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 6.3e-07 58.5 54 53.7
arahy.Tifrunner.gnm1.ann1.9NB33V Arachis hypogaea HOM05D000448 ORTHO05D000291 8.2e-07 58.2 122 28.7
QL05p008915 Quercus lobata HOM05D000448 ORTHO05D000291 8.2e-07 58.2 63 44.4
RcHm_v2.0_Chr2g0094191 Rosa chinensis HOM05D000448 ORTHO05D000291 8.2e-07 58.2 87 39.1
Manes.09G152200 Manihot esculenta HOM05D000278 ORTHO05D005754 1.1e-06 57.8 37 75.7
Aqoxy3G00177 Aquilegia oxysepala HOM05D000278 ORTHO05D005754 1.4e-06 57.4 37 75.7
Dinv10409 Davidia involucrata HOM05D000278 ORTHO05D005754 1.4e-06 57.4 37 78.4
Dinv13559 Davidia involucrata HOM05D000278 ORTHO05D005754 1.4e-06 57.4 37 78.4
Hma1.2p1_1257F.1_g270720 Hydrangea macrophylla HOM05D000278 ORTHO05D005754 1.4e-06 57.4 37 78.4
Hma1.2p1_1612F.1_g293560 Hydrangea macrophylla HOM05D000278 ORTHO05D005754 1.4e-06 57.4 37 78.4
Lsat_1_v5_gn_5_156500 Lactuca sativa HOM05D000278 ORTHO05D005754 1.4e-06 57.4 37 78.4
Nn3g17995 Nelumbo nucifera HOM05D000278 ORTHO05D005754 1.4e-06 57.4 37 78.4
Nn4g24016 Nelumbo nucifera HOM05D000278 ORTHO05D005754 1.4e-06 57.4 37 78.4
QL05p009005 Quercus lobata HOM05D000448 ORTHO05D000291 1.4e-06 57.4 105 35.2
TAR479G0001 Trochodendron aralioides HOM05D000448 ORTHO05D000291 1.4e-06 57.4 101 40.6
TAR622G1096 Trochodendron aralioides HOM05D000278 ORTHO05D005754 1.4e-06 57.4 37 78.4
Cpa.g.sc999.3 Carica papaya HOM05D000278 ORTHO05D005754 1.8e-06 57.0 37 75.7
Ca_15620_v3 Cicer arietinum L. HOM05D000278 ORTHO05D005754 1.8e-06 57.0 37 75.7
Cc04_g06750 Coffea canephora HOM05D000278 ORTHO05D005754 1.8e-06 57.0 37 75.7
ECA236G0654 Erigeron canadensis HOM05D000278 ORTHO05D005754 1.8e-06 57.0 37 75.7
Oeu024336.1 Olea europaea HOM05D000278 ORTHO05D005754 1.8e-06 57.0 37 75.7
Phvul.002G326300 Phaseolus vulgaris HOM05D000278 ORTHO05D005754 1.8e-06 57.0 37 75.7
PGR044G2034 Punica granatum HOM05D000278 ORTHO05D005754 1.8e-06 57.0 37 75.7
Cfa019715 Carpinus fangiana HOM05D000278 ORTHO05D005754 2.4e-06 56.6 37 75.7
CiPaw.16G089700 Carya illinoinensis HOM05D000278 ORTHO05D005754 2.4e-06 56.6 37 75.7
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 2.4e-06 56.6 37 75.7
Glyma.05G242700 Glycine max HOM05D000278 ORTHO05D005754 2.4e-06 56.6 37 75.7
Nitab4.5_0005692g0010 Nicotiana tabacum HOM05D000278 ORTHO05D005754 2.4e-06 56.6 37 75.7
PSO541G5062 Papaver somniferum HOM05D000278 ORTHO05D005754 2.4e-06 56.6 37 73.0
PSO675G0205 Papaver somniferum HOM05D000278 ORTHO05D005754 2.4e-06 56.6 37 73.0
Psat7g005560 Pisum sativum HOM05D000278 ORTHO05D005754 2.4e-06 56.6 37 75.7
Potri.015G042600 Populus trichocarpa HOM05D000278 ORTHO05D005754 2.4e-06 56.6 37 73.0
TAR479G0004 Trochodendron aralioides HOM05D000448 ORTHO05D000291 2.4e-06 56.6 88 38.6
VMungo0251G3005 Vigna mungo HOM05D000278 ORTHO05D005754 2.4e-06 56.6 37 75.7
ATR0582G154 Amborella trichopoda HOM05D000278 ORTHO05D005754 3.1e-06 56.2 37 75.7
CiPaw.03G111300 Carya illinoinensis HOM05D000448 ORTHO05D000291 3.1e-06 56.2 121 34.7
CiPaw.04G072700 Carya illinoinensis HOM05D000448 ORTHO05D000291 3.1e-06 56.2 124 33.1
CDE07G1852 Ceratophyllum demersum HOM05D000278 ORTHO05D005754 3.1e-06 56.2 98 39.8
Ca_17227_v3 Cicer arietinum L. HOM05D000278 ORTHO05D005754 3.1e-06 56.2 37 75.7
Gohir.A11G006100 Gossypium hirsutum HOM05D000278 ORTHO05D005754 3.1e-06 56.2 37 73.0
Gohir.D11G005200 Gossypium hirsutum HOM05D000278 ORTHO05D005754 3.1e-06 56.2 37 73.0
Gorai.007G006400 Gossypium raimondii HOM05D000278 ORTHO05D005754 3.1e-06 56.2 37 73.0
HanXRQChr01g0008541 Helianthus annuus HOM05D000278 ORTHO05D005754 3.1e-06 56.2 37 75.7
Potri.012G051300 Populus trichocarpa HOM05D000278 ORTHO05D005754 3.1e-06 56.2 37 73.0
THA.LOC104820373 Tarenaya hassleriana HOM05D000278 ORTHO05D005754 3.1e-06 56.2 37 73.0
GSVIVG01015126001 Vitis vinifera HOM05D000448 ORTHO05D000291 3.1e-06 56.2 58 44.8
DCAR_023227 Daucus carota HOM05D000278 ORTHO05D005754 4.1e-06 55.8 37 75.7
Peaxi162Scf00683g00032 Petunia axillaris HOM05D000278 ORTHO05D005754 4.1e-06 55.8 37 73.0
COL.COLO4_23991 Corchorus olitorius HOM05D000278 ORTHO05D005754 5.3e-06 55.5 37 75.7
ECA248G1701 Erigeron canadensis HOM05D000448 ORTHO05D000291 5.3e-06 55.5 57 40.4
HanXRQChr13g0387831 Helianthus annuus HOM05D000278 ORTHO05D005754 5.3e-06 55.5 37 75.7
Lj1A152G45 Lonicera japonica HOM05D000278 ORTHO05D005754 5.3e-06 55.5 37 75.7
Lj9A423T66 Lonicera japonica HOM05D000278 ORTHO05D005754 5.3e-06 55.5 37 75.7
Manes.04G059400 Manihot esculenta HOM05D000278 ORTHO05D005754 5.3e-06 55.5 37 70.3
Nitab4.5_0001456g0010 Nicotiana tabacum HOM05D000278 ORTHO05D005754 5.3e-06 55.5 37 73.0
QL10p027147 Quercus lobata HOM05D000278 ORTHO05D005754 5.3e-06 55.5 37 70.3
Rhsim12G0208500 Rhododendron simsii HOM05D000448 ORTHO05D000291 5.3e-06 55.5 86 36.0
TAR501G0001 Trochodendron aralioides HOM05D000448 ORTHO05D000291 5.3e-06 55.5 74 39.2
Aqoxy3G00176 Aquilegia oxysepala HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 73.0
CSS0023726 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 73.0
CSS0031079 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 73.0
CiPaw.03G112000 Carya illinoinensis HOM05D000448 ORTHO05D000291 7.0e-06 55.1 130 27.7
COL.COLO4_04278 Corchorus olitorius HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 73.0
Gohir.A09G174700 Gossypium hirsutum HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 70.3
Gohir.D09G171700 Gossypium hirsutum HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 70.3
Gorai.006G193500 Gossypium raimondii HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 70.3
Lsat_1_v5_gn_5_29481 Lactuca sativa HOM05D000448 ORTHO05D000291 7.0e-06 55.1 101 32.7
Lsat_1_v5_gn_5_30860 Lactuca sativa HOM05D000448 ORTHO05D000291 7.0e-06 55.1 69 39.1
QL05p008953 Quercus lobata HOM05D000448 ORTHO05D000291 7.0e-06 55.1 103 35.9
Rhsim12G0140600 Rhododendron simsii HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 73.0
Thecc.03G045100 Theobroma cacao HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 73.0
TWI15G0649 Tripterygium wilfordii HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 73.0
TWI60G1222 Tripterygium wilfordii HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 73.0
TAR374G0990 Trochodendron aralioides HOM05D000278 ORTHO05D005754 7.0e-06 55.1 37 75.7
Atru.chr9.933 Acer truncatum HOM05D000278 ORTHO05D005754 9.1e-06 54.7 37 70.3
Ciclev10007963m.g Citrus clementina HOM05D000278 ORTHO05D005754 9.1e-06 54.7 37 70.3
Eucgr.K02244 Eucalyptus grandis HOM05D000278 ORTHO05D005754 9.1e-06 54.7 37 70.3
Glyma.07G149200 Glycine max HOM05D000278 ORTHO05D005754 9.1e-06 54.7 37 73.0
Glyma.08G050100 Glycine max HOM05D000278 ORTHO05D005754 9.1e-06 54.7 37 73.0
Lj1A658T5 Lonicera japonica HOM05D000448 ORTHO05D000291 9.1e-06 54.7 122 30.3
Medtr3g109925 Medicago truncatula HOM05D000278 ORTHO05D005754 9.1e-06 54.7 37 70.3
vmacro10494 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 9.1e-06 54.7 128 30.5


User provided reference genes

Program Settings