Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 6.5e-96 354.0 170 100.0
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 1.6e-86 322.8 170 88.8
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.1e-86 322.4 170 88.2
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 2.7e-86 322.0 170 87.6
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 7.9e-86 320.5 170 89.4
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 1.0e-85 320.1 170 88.2
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.8e-85 319.3 170 88.8
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.8e-85 319.3 170 88.8
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 1.8e-85 319.3 170 87.1
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.9e-85 318.2 170 87.1
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 3.9e-85 318.2 170 87.6
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 1.1e-84 316.6 168 87.5
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.5e-84 316.2 171 88.3
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.6e-84 315.5 168 86.9
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 1.3e-83 313.2 170 85.9
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 2.2e-83 312.4 167 86.2
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 4.8e-83 311.2 165 87.9
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 6.3e-83 310.8 168 85.7
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 1.1e-82 310.1 166 85.5
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 3.1e-82 308.5 169 85.2
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 5.3e-82 307.8 168 85.1
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 9.1e-82 307.0 170 85.3
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 1.2e-81 306.6 169 85.2
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 1.2e-81 306.6 170 85.3
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 2.0e-81 305.8 167 87.4
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 2.6e-81 305.4 170 84.7
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 5.9e-81 304.3 168 83.9
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 5.9e-81 304.3 168 85.7
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 7.7e-81 303.9 170 85.3
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 2.2e-80 302.4 167 83.8
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 6.5e-80 300.8 171 85.4
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 8.5e-80 300.4 164 85.4
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 1.5e-79 299.7 171 82.5
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.9e-79 299.3 168 82.1
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 3.2e-79 298.5 171 82.5
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 4.2e-79 298.1 168 83.9
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 5.5e-79 297.7 168 82.7
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 5.5e-79 297.7 171 82.5
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 9.4e-79 297.0 168 82.1
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 1.2e-78 296.6 166 83.7
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 1.6e-78 296.2 174 79.3
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 2.7e-78 295.4 153 90.2
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 2.7e-78 295.4 168 82.7
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 2.7e-78 295.4 169 81.1
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 2.7e-78 295.4 166 83.7
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 4.7e-78 294.7 167 83.2
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 8.0e-78 293.9 165 85.5
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 8.0e-78 293.9 168 81.5
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 1.0e-77 293.5 171 80.7
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.8e-77 292.7 170 80.0
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 2.3e-77 292.4 171 80.7
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 2.3e-77 292.4 166 81.3
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 4.0e-77 291.6 169 80.5
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 8.8e-77 290.4 161 83.2
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 8.8e-77 290.4 164 84.1
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 2.0e-76 289.3 155 86.5
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 2.6e-76 288.9 170 80.0
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 3.3e-76 288.5 170 80.6
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 3.3e-76 288.5 171 78.9
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 4.4e-76 288.1 164 83.5
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 5.7e-76 287.7 165 81.8
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 7.5e-76 287.3 165 80.0
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 7.5e-76 287.3 165 83.0
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 9.7e-76 287.0 165 82.4
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 2.8e-75 285.4 170 79.4
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 2.8e-75 285.4 172 79.1
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.8e-74 282.7 165 80.6
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.8e-74 282.7 165 80.6
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 3.1e-74 282.0 168 81.5
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 5.3e-74 281.2 173 78.0
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 7.0e-74 280.8 155 83.2
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 9.1e-74 280.4 165 80.0
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 9.1e-74 280.4 168 78.0
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 1.2e-73 280.0 173 77.5
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.2e-73 280.0 161 80.7
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 2.7e-73 278.9 165 80.0
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 4.5e-73 278.1 161 80.7
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 1.0e-72 276.9 173 76.3
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.0e-72 276.9 166 80.7
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 1.3e-72 276.6 153 83.0
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 1.3e-72 276.6 161 81.4
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 3.8e-72 275.0 163 79.8
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 5.0e-72 274.6 151 85.4
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 1.1e-71 273.5 164 78.7
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 1.1e-71 273.5 163 80.4
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.9e-71 272.7 166 77.1
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 3.2e-71 271.9 157 83.4
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 2.1e-70 269.2 170 77.1
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 2.7e-70 268.9 154 81.8
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 3.6e-70 268.5 151 81.5
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 8.0e-70 267.3 168 76.2
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 1.4e-69 266.5 163 79.1
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 1.4e-69 266.5 188 71.3
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 1.8e-69 266.2 154 82.5
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 5.2e-69 264.6 155 79.4
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 1.7e-67 259.6 171 73.7
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 3.7e-67 258.5 164 75.6
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 8.3e-67 257.3 152 79.6
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 2.4e-66 255.8 139 82.7
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 2.4e-66 255.8 139 82.7
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 2.4e-66 255.8 153 78.4
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 7.0e-66 254.2 156 78.8
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 9.1e-66 253.8 151 78.1
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 2.0e-65 252.7 151 77.5
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.7e-64 249.6 151 76.8
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 1.1e-63 246.9 188 66.0
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 1.4e-61 240.0 166 72.9
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 8.8e-61 237.3 156 71.8
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.4e-58 229.2 179 64.8
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.2e-57 226.9 142 76.8
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.2e-57 226.9 122 84.4
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 1.6e-57 226.5 316 42.7
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 4.5e-57 224.9 157 70.1
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.3e-56 223.4 155 67.1
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.3e-56 223.4 166 65.1
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.7e-56 223.0 141 75.2
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 2.3e-56 222.6 134 79.9
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 2.4e-50 202.6 112 83.9
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 9.5e-47 190.7 308 39.6
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 1.2e-46 190.3 170 59.4
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 1.3e-43 180.3 219 48.9
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 2.8e-38 162.5 209 45.5
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 6.6e-32 141.4 80 81.2
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.4e-29 133.7 76 80.3
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.0e-28 129.8 84 75.0
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 2.7e-25 119.4 66 83.3
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 4.0e-21 105.5 55 81.8
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 5.6e-15 85.1 44 79.5
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 4.8e-14 82.0 88 48.9
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 1.1e-13 80.9 69 53.6
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 3.4e-12 75.9 44 79.5
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 5.4e-10 68.6 119 37.0
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 6.0e-09 65.1 39 71.8


User provided reference genes

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