Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 5.3e-119 431.0 217 100.0
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 5.2e-106 387.9 217 88.0
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 3.4e-105 385.2 217 88.9
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 1.6e-102 376.3 217 87.6
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 3.8e-101 371.7 217 86.6
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 3.2e-100 368.6 218 83.5
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.8e-98 362.8 222 80.6
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.2e-97 360.1 222 80.2
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 1.3e-96 356.7 222 78.8
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 1.4e-95 353.2 222 80.6
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 3.1e-95 352.1 222 79.7
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 7.0e-95 350.9 217 82.5
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 1.6e-94 349.7 219 79.5
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 1.3e-93 346.7 217 81.6
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 1.7e-93 346.3 207 82.6
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 3.3e-92 342.0 221 76.5
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 4.3e-92 341.7 221 76.5
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 7.3e-92 340.9 217 81.6
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 2.8e-91 339.0 221 77.8
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.8e-90 336.3 217 77.0
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 2.3e-90 335.9 223 74.4
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 9.8e-89 330.5 219 74.9
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 9.8e-89 330.5 216 75.5
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 9.8e-89 330.5 217 76.0
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 1.7e-88 329.7 191 84.8
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 2.2e-88 329.3 217 75.1
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 2.2e-88 329.3 202 80.7
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 2.9e-88 328.9 218 77.5
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 3.7e-88 328.6 218 76.1
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 8.3e-88 327.4 215 76.3
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 1.8e-87 326.2 217 77.0
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 9.2e-87 323.9 190 83.2
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 9.2e-87 323.9 217 76.5
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.2e-86 323.6 203 79.3
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 2.0e-86 322.8 222 75.2
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 2.0e-86 322.8 219 76.3
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 7.8e-86 320.9 217 75.6
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 1.3e-85 320.1 217 74.7
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 1.7e-85 319.7 217 75.1
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 1.7e-85 319.7 217 75.1
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 3.0e-85 318.9 222 72.5
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 3.9e-85 318.5 193 80.8
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 8.6e-85 317.4 217 71.9
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 1.1e-84 317.0 215 73.5
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 1.1e-84 317.0 217 74.2
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 1.9e-84 316.2 217 73.3
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 1.9e-84 316.2 189 78.3
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 2.5e-84 315.8 217 74.2
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 3.3e-84 315.5 218 72.9
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 3.3e-84 315.5 195 79.5
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 4.3e-84 315.1 218 73.9
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 9.5e-84 313.9 209 77.5
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 4.0e-82 308.5 217 73.3
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 6.8e-82 307.8 217 72.8
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 2.0e-81 306.2 191 80.1
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 4.4e-81 305.1 190 78.4
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 2.9e-80 302.4 195 75.4
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 6.4e-80 301.2 205 73.2
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 1.1e-79 300.4 197 74.1
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 1.4e-79 300.1 179 81.0
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 1.9e-79 299.7 217 70.5
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 1.9e-79 299.7 179 79.9
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 3.2e-79 298.9 205 72.7
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 5.4e-79 298.1 217 69.1
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 1.2e-78 297.0 216 70.4
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 1.2e-78 297.0 203 71.4
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 1.6e-78 296.6 204 73.5
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 2.7e-78 295.8 188 76.6
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 6.0e-78 294.7 216 69.0
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 7.8e-78 294.3 214 68.7
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 7.8e-78 294.3 227 68.7
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 1.7e-77 293.1 200 73.0
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 3.0e-77 292.4 208 71.6
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 3.9e-77 292.0 217 68.2
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 5.0e-77 291.6 227 67.0
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 6.6e-77 291.2 212 70.3
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 8.6e-77 290.8 208 69.2
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.1e-76 290.4 227 66.5
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 1.9e-76 289.7 205 70.2
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 2.5e-76 289.3 207 69.6
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 3.3e-76 288.9 202 70.3
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 3.3e-76 288.9 182 74.2
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 1.1e-74 283.9 301 51.5
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 1.1e-74 283.9 187 74.9
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 2.3e-74 282.7 197 69.0
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 2.6e-73 279.3 240 61.2
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 2.6e-73 279.3 241 61.4
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 4.4e-73 278.5 175 75.4
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 4.4e-73 278.5 203 70.0
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 5.8e-73 278.1 170 78.2
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 5.8e-73 278.1 170 78.2
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 5.8e-73 278.1 219 67.1
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 7.5e-73 277.7 170 77.6
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 9.8e-73 277.3 170 77.6
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 9.8e-73 277.3 169 78.1
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 1.3e-72 276.9 170 77.6
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 1.3e-72 276.9 170 77.6
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 2.2e-72 276.2 169 77.5
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 2.9e-72 275.8 170 77.1
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 3.7e-72 275.4 240 60.4
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 3.7e-72 275.4 170 77.1
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 8.3e-72 274.2 205 69.3
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 8.3e-72 274.2 170 75.3
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 8.3e-72 274.2 174 77.0
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 5.4e-71 271.6 170 76.5
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 5.4e-71 271.6 170 76.5
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 5.4e-71 271.6 170 76.5
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 2.7e-70 269.2 202 67.3
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 3.5e-70 268.9 238 60.1
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 5.1e-69 265.0 188 67.6
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 1.2e-67 260.4 193 65.8
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 4.0e-66 255.4 286 51.0
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 6.8e-66 254.6 189 69.8
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 4.4e-65 251.9 201 62.2
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 3.9e-61 238.8 157 77.1
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 6.6e-61 238.0 216 58.3
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 7.3e-60 234.6 149 78.5
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 9.6e-60 234.2 218 56.9
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 1.2e-59 233.8 215 57.2
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 2.1e-59 233.0 218 56.9
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 1.3e-56 223.8 151 72.2
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 9.3e-55 217.6 152 71.7
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 2.7e-54 216.1 167 60.5
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 1.0e-53 214.2 135 77.0
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 2.3e-53 213.0 152 71.1
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 3.3e-52 209.1 141 70.2
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 3.3e-52 209.1 149 73.2
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 4.9e-48 195.3 134 68.7
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 1.2e-46 190.7 155 63.9
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 2.0e-41 173.3 143 62.9
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 3.8e-40 169.1 177 53.7
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 6.7e-37 158.3 108 66.7
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 3.3e-36 156.0 131 57.3
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 7.4e-36 154.8 105 64.8
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 2.8e-35 152.9 113 61.1
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 7.6e-33 144.8 94 73.4
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 1.3e-32 144.1 92 73.9
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 6.7e-29 131.7 125 56.8
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 6.7e-29 131.7 125 56.8
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 6.9e-26 121.7 99 63.6
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 1.3e-24 117.5 88 68.2
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 7.9e-22 108.2 87 59.8
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 4.8e-19 99.0 67 71.6
Sopen10g011390 Solanum pennellii HOM05D004975 ORTHO05D005963 1.3e-16 90.9 59 72.9
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 1.7e-16 90.5 76 55.3
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 1.6e-14 84.0 153 37.3
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 2.0e-12 77.0 54 64.8
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 4.8e-11 72.4 45 66.7
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 2.4e-10 70.1 48 70.8


User provided reference genes

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