Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 4.5e-110 401.4 216 100.0
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 1.4e-71 273.5 214 71.0
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 6.4e-64 248.1 214 65.0
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 6.0e-62 241.5 213 62.9
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 1.9e-60 236.5 237 59.9
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.5e-57 226.9 209 60.8
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 3.5e-54 215.7 195 60.5
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 8.6e-53 211.1 195 57.9
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 4.3e-52 208.8 195 57.9
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 1.2e-51 207.2 211 54.0
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 3.6e-51 205.7 195 57.4
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 4.7e-51 205.3 195 56.9
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 8.1e-51 204.5 212 59.4
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 1.4e-50 203.8 177 63.8
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 2.0e-49 199.9 193 57.0
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 5.8e-49 198.4 212 54.2
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 5.8e-49 198.4 183 61.7
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 1.4e-47 193.7 166 65.7
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 2.4e-47 193.0 211 54.0
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 7.1e-47 191.4 213 54.5
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 2.1e-46 189.9 212 54.2
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 2.1e-46 189.9 182 54.9
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 2.3e-45 186.4 207 53.1
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 3.9e-45 185.7 197 54.8
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 8.6e-45 184.5 197 55.8
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 1.5e-44 183.7 204 52.0
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 2.5e-44 183.0 193 51.8
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 3.3e-44 182.6 208 51.9
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 5.6e-44 181.8 194 54.1
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 3.6e-43 179.1 183 55.2
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 3.6e-43 179.1 207 54.1
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 3.6e-43 179.1 179 56.4
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 6.2e-43 178.3 164 61.0
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 6.2e-43 178.3 193 52.3
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 8.1e-43 177.9 183 55.2
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.4e-42 177.2 183 55.2
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 1.4e-42 177.2 163 60.7
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 1.8e-42 176.8 208 50.5
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 4.0e-42 175.6 216 49.5
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 4.0e-42 175.6 182 54.4
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 5.2e-42 175.3 206 49.5
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 5.2e-42 175.3 183 54.1
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 5.2e-42 175.3 208 51.0
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 8.9e-42 174.5 208 49.5
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 1.2e-41 174.1 207 53.6
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 2.6e-41 172.9 209 49.8
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 2.6e-41 172.9 180 56.1
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 5.8e-41 171.8 160 56.9
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 7.6e-41 171.4 184 51.6
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 2.9e-40 169.5 174 53.4
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 6.4e-40 168.3 182 53.3
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 1.4e-39 167.2 183 52.5
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 3.2e-39 166.0 203 46.3
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 4.2e-39 165.6 174 56.9
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 4.2e-39 165.6 191 52.9
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 5.4e-39 165.2 196 51.5
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 5.4e-39 165.2 179 52.0
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 2.7e-38 162.9 178 55.1
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 3.5e-38 162.5 141 61.0
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 3.5e-38 162.5 206 48.5
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 3.5e-38 162.5 184 53.3
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 7.8e-38 161.4 178 54.5
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 1.3e-37 160.6 191 51.3
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 1.7e-37 160.2 206 48.5
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 5.1e-37 158.7 174 54.6
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 7.3e-36 154.8 204 47.5
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 9.6e-36 154.5 179 50.8
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.3e-35 154.1 205 46.8
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 1.6e-35 153.7 162 55.6
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.2e-35 151.8 177 50.8
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.1e-34 151.0 177 50.3
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.1e-34 151.0 164 53.7
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 2.0e-33 146.7 173 48.0
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 3.4e-33 146.0 177 52.0
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 3.8e-32 142.5 143 59.4
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 1.1e-31 141.0 211 45.0
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 2.7e-30 136.3 134 59.0
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.3e-29 134.0 137 55.5
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 1.1e-28 131.0 145 51.0
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 3.3e-28 129.4 136 55.1
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 1.3e-27 127.5 209 39.2
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 3.6e-27 125.9 225 36.4
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 5.8e-25 118.6 179 38.5
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 3.2e-23 112.8 209 38.8
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 2.1e-22 110.2 77 76.6
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 5.1e-21 105.5 77 71.4
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 8.7e-21 104.8 129 45.7
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 4.0e-18 95.9 129 44.2
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 2.9e-16 89.7 87 55.2
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 1.1e-15 87.8 209 33.5
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 7.1e-15 85.1 175 36.0
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 6.0e-14 82.0 196 31.6
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 5.9e-09 65.5 59 54.2
CSS0039372 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 1.2e-06 57.8 41 68.3


User provided reference genes

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