Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30187 Davidia involucrata HOM05D005001 ORTHO05D005796 6.9e-96 354.0 180 100.0
Dinv23669 Davidia involucrata HOM05D005001 ORTHO05D005796 9.3e-69 263.8 173 80.3
Dinv03480 Davidia involucrata HOM05D005001 ORTHO05D005796 1.0e-51 207.2 115 89.6
Dinv08162 Davidia involucrata HOM05D005001 ORTHO05D005796 6.3e-25 118.2 152 50.0
Dinv40189 Davidia involucrata HOM05D005001 ORTHO05D005796 3.6e-20 102.4 161 44.1
GSVIVG01026639001 Vitis vinifera HOM05D005001 ORTHO05D005796 6.8e-19 98.2 152 46.1
Dinv17544 Davidia involucrata HOM05D033086 ORTHO05D179060 7.5e-18 94.7 87 62.1
CSS0002200 Camellia sinensis var. sinensis HOM05D005001 ORTHO05D005796 1.3e-17 94.0 152 44.1
CSS0020393 Camellia sinensis var. sinensis HOM05D005001 ORTHO05D005796 1.3e-17 94.0 152 44.1
Dinv31022 Davidia involucrata HOM05D033086 ORTHO05D005796 1.1e-16 90.9 102 54.9
Dinv31080 Davidia involucrata HOM05D033086 ORTHO05D005796 1.1e-16 90.9 102 54.9
CSS0006057 Camellia sinensis var. sinensis HOM05D005001 ORTHO05D005796 1.8e-16 90.1 151 44.4
Gohir.A02G177800 Gossypium hirsutum HOM05D005001 ORTHO05D005796 1.8e-16 90.1 160 40.0
Duzib147G1512 Durio zibethinus HOM05D005001 ORTHO05D005796 3.2e-16 89.4 152 39.5
COL.COLO4_22551 Corchorus olitorius HOM05D005001 ORTHO05D005796 5.4e-16 88.6 152 40.8
Gorai.003G002300 Gossypium raimondii HOM05D005001 ORTHO05D005796 5.4e-16 88.6 152 40.1
Lj2C499T6 Lonicera japonica HOM05D005001 ORTHO05D005796 5.4e-16 88.6 151 43.0
Peaxi162Scf00122g02417 Petunia axillaris HOM05D005001 ORTHO05D005796 7.0e-16 88.2 133 42.1
Sopen03g005960 Solanum pennellii HOM05D005001 ORTHO05D005796 7.0e-16 88.2 142 44.4
Nitab4.5_0001467g0010 Nicotiana tabacum HOM05D005001 ORTHO05D005796 1.2e-15 87.4 132 42.4
Actinidia17358 Actinidia chinensis HOM05D005001 ORTHO05D005796 2.0e-15 86.7 151 43.0
PGSC0003DMG400018683 Solanum tuberosum HOM05D005001 ORTHO05D005796 2.0e-15 86.7 142 43.7
MD15G1231000 Malus domestica HOM05D005001 ORTHO05D005796 2.7e-15 86.3 160 38.8
Nitab4.5_0000495g0110 Nicotiana tabacum HOM05D005001 ORTHO05D005796 2.7e-15 86.3 163 39.3
Nitab4.5_0004608g0060 Nicotiana tabacum HOM05D005001 ORTHO05D005796 5.9e-15 85.1 132 41.7
Nitab4.5_0005297g0010 Nicotiana tabacum HOM05D005001 ORTHO05D005796 5.9e-15 85.1 147 40.1
Actinidia22897 Actinidia chinensis HOM05D005001 ORTHO05D005796 7.8e-15 84.7 151 42.4
Thecc.01G005400 Theobroma cacao HOM05D005001 ORTHO05D005796 7.8e-15 84.7 152 40.8
Solyc03g032110.3 Solanum lycopersicum HOM05D005001 ORTHO05D005796 1.0e-14 84.3 142 43.7
Eucgr.J02537 Eucalyptus grandis HOM05D005001 ORTHO05D005796 1.3e-14 84.0 179 39.7
PGSC0003DMG400001566 Solanum tuberosum HOM05D005001 ORTHO05D005796 1.3e-14 84.0 135 39.3
Atru.chr3.132 Acer truncatum HOM05D005001 ORTHO05D005796 1.7e-14 83.6 153 39.2
Glyma.01G158600 Glycine max HOM05D005001 ORTHO05D005796 1.7e-14 83.6 160 38.1
TWI53G0117 Tripterygium wilfordii HOM05D005001 ORTHO05D005796 1.7e-14 83.6 151 39.7
Glyma.11G086000 Glycine max HOM05D005001 ORTHO05D005796 2.3e-14 83.2 161 37.9
Ciclev10024851m.g Citrus clementina HOM05D005001 ORTHO05D005796 3.0e-14 82.8 152 39.5
Gohir.D03G002000 Gossypium hirsutum HOM05D005001 ORTHO05D005796 3.0e-14 82.8 152 38.8
TPR.G33869 Trifolium pratense HOM05D005001 ORTHO05D005796 5.0e-14 82.0 144 39.6
TAR628G1461 Trochodendron aralioides HOM05D005001 ORTHO05D005796 6.6e-14 81.6 161 38.5
Solyc02g082680.4 Solanum lycopersicum HOM05D005001 ORTHO05D005796 8.6e-14 81.3 135 39.3
arahy.Tifrunner.gnm1.ann1.1YR532 Arachis hypogaea HOM05D005001 ORTHO05D005796 1.1e-13 80.9 162 36.4
arahy.Tifrunner.gnm1.ann1.XJ0R0A Arachis hypogaea HOM05D005001 ORTHO05D005796 1.1e-13 80.9 162 36.4
Manes.02G114100 Manihot esculenta HOM05D005001 ORTHO05D005796 1.5e-13 80.5 153 36.6
Manes.01G155500 Manihot esculenta HOM05D005001 ORTHO05D005796 1.9e-13 80.1 153 37.3
Sopen02g027420 Solanum pennellii HOM05D005001 ORTHO05D005796 1.9e-13 80.1 135 39.3
Medtr5g024240 Medicago truncatula HOM05D005001 ORTHO05D005796 2.5e-13 79.7 135 40.7
Nn6g31704 Nelumbo nucifera HOM05D005001 ORTHO05D005796 2.5e-13 79.7 152 38.2
Peaxi162Scf01475g00020 Petunia axillaris HOM05D005001 ORTHO05D005796 2.5e-13 79.7 135 38.5
AUR62002047 Chenopodium quinoa HOM05D005001 ORTHO05D005796 3.3e-13 79.3 154 37.0
Migut.L00777 Erythranthe guttata HOM05D005001 ORTHO05D005796 3.3e-13 79.3 161 39.1
vmacro20631 Vaccinium macrocarpon HOM05D005001 ORTHO05D005796 3.3e-13 79.3 152 41.4
AUR62003748 Chenopodium quinoa HOM05D005001 ORTHO05D005796 4.3e-13 79.0 154 37.0
Oeu042477.2 Olea europaea HOM05D005001 ORTHO05D005796 4.3e-13 79.0 133 42.1
TWI09G0186 Tripterygium wilfordii HOM05D005001 ORTHO05D005796 4.3e-13 79.0 153 38.6
Psat2g148080 Pisum sativum HOM05D005001 ORTHO05D005796 5.6e-13 78.6 135 39.3
Cpa.g.sc6.369 Carica papaya HOM05D005001 ORTHO05D005796 7.3e-13 78.2 152 36.2
Lj2g0010904 Lotus japonicus HOM05D005001 ORTHO05D005796 7.3e-13 78.2 160 38.1
Prupe.7G183200 Prunus persica HOM05D005001 ORTHO05D005796 7.3e-13 78.2 163 38.7
CsaV3_3G000320 Cucumis sativus L. HOM05D005001 ORTHO05D005796 1.2e-12 77.4 158 35.4
Rhsim10G0195500 Rhododendron simsii HOM05D005001 ORTHO05D005796 1.2e-12 77.4 152 40.1
MD02G1115000 Malus domestica HOM05D005001 ORTHO05D005796 2.1e-12 76.6 151 35.1
RcHm_v2.0_Chr2g0097131 Rosa chinensis HOM05D005001 ORTHO05D005796 2.1e-12 76.6 151 37.1
Cfa007079 Carpinus fangiana HOM05D005001 ORTHO05D005796 3.6e-12 75.9 161 36.0
ClCG10G000290 Citrullus lanatus HOM05D005001 ORTHO05D005796 3.6e-12 75.9 164 35.4
FAN23G2126 Fragaria x ananassa HOM05D005001 ORTHO05D005796 3.6e-12 75.9 151 37.1
Ca_24983_v3 Cicer arietinum L. HOM05D005001 ORTHO05D005796 4.7e-12 75.5 144 38.2
Cc07_g11880 Coffea canephora HOM05D005001 ORTHO05D005796 6.2e-12 75.1 134 38.8
Sabra05G0084100 Salix brachista HOM05D005001 ORTHO05D005796 6.2e-12 75.1 142 38.0
VMungo1215G1172 Vigna mungo HOM05D005001 ORTHO05D005796 8.0e-12 74.7 151 37.1
Haze_03653 Corylus avellana HOM05D005001 ORTHO05D005796 1.4e-11 73.9 153 35.9
CANSAT25G0747 Cannabis sativa HOM05D005001 ORTHO05D005796 1.8e-11 73.6 154 37.0
FvH4_1g10290 Fragaria vesca HOM05D005001 ORTHO05D005796 1.8e-11 73.6 154 38.3
FAN19G0848 Fragaria x ananassa HOM05D005001 ORTHO05D005796 1.8e-11 73.6 154 38.3
FAN26G0131 Fragaria x ananassa HOM05D005001 ORTHO05D005796 1.8e-11 73.6 154 38.3
Sed0016412 Sechium edule HOM05D005001 ORTHO05D005796 1.8e-11 73.6 182 34.6
Potri.005G101700 Populus trichocarpa HOM05D005001 ORTHO05D005796 2.3e-11 73.2 142 38.0
Phvul.002G116700 Phaseolus vulgaris HOM05D005001 ORTHO05D005796 5.2e-11 72.0 152 37.5
CiPaw.08G181700 Carya illinoinensis HOM05D005001 ORTHO05D005796 8.9e-11 71.2 149 35.6
Glyma.09G198000 Glycine max HOM05D005001 ORTHO05D005796 8.9e-11 71.2 160 37.5
Glyma.16G116100 Glycine max HOM05D005001 ORTHO05D005796 8.9e-11 71.2 145 37.2
Lsat_1_v5_gn_3_67981 Lactuca sativa HOM05D005001 ORTHO05D005796 8.9e-11 71.2 165 36.4
QL06p052982 Quercus lobata HOM05D005001 ORTHO05D005796 8.9e-11 71.2 152 37.5
Gorai.001G199100 Gossypium raimondii HOM05D005001 ORTHO05D005796 1.5e-10 70.5 155 34.2
EL10Ac6g15057 Beta vulgaris HOM05D005001 ORTHO05D005796 2.0e-10 70.1 154 36.4
HanXRQChr16g0531881 Helianthus annuus HOM05D005001 ORTHO05D005796 3.4e-10 69.3 151 34.4
Nn5g30991 Nelumbo nucifera HOM05D005001 ORTHO05D005796 7.5e-10 68.2 137 33.6
Lalb_Chr05g0214801 Lupinus albus HOM05D005001 ORTHO05D005796 9.8e-10 67.8 154 33.8
Lj4g0000674 Lotus japonicus HOM05D005001 ORTHO05D005796 1.3e-09 67.4 153 35.9
Ah.02g122920 Amaranthus hybridus HOM05D005001 ORTHO05D005796 1.7e-09 67.0 153 35.9
CiPaw.07G002600 Carya illinoinensis HOM05D005001 ORTHO05D005796 1.7e-09 67.0 161 35.4
MSTRG.3631 Avicennia marina HOM05D005001 ORTHO05D005796 2.2e-09 66.6 163 36.2
MELO3C013726.2 Cucumis melo HOM05D005001 ORTHO05D005796 2.9e-09 66.2 172 32.6
ECA246G0522 Erigeron canadensis HOM05D005001 ORTHO05D005796 3.7e-09 65.9 149 36.9
SalBow5G1781 Salvia bowleyana HOM05D005001 ORTHO05D005796 3.7e-09 65.9 152 36.2
Hund03602 Selenicereus undatus HOM05D005001 ORTHO05D005796 3.7e-09 65.9 152 34.2
THA.LOC104804295 Tarenaya hassleriana HOM05D005001 ORTHO05D005796 8.3e-09 64.7 150 34.0
SalBow3G0770 Salvia bowleyana HOM05D005001 ORTHO05D005796 1.1e-08 64.3 152 36.2
SalBow3G4537 Salvia bowleyana HOM05D005001 ORTHO05D005796 1.1e-08 64.3 152 36.2
arahy.Tifrunner.gnm1.ann1.3933SP Arachis hypogaea HOM05D005001 ORTHO05D005796 1.9e-08 63.5 155 34.8
DCAR_002956 Daucus carota HOM05D005001 ORTHO05D005796 1.9e-08 63.5 148 37.2
Phvul.003G270200 Phaseolus vulgaris HOM05D005001 ORTHO05D005796 1.9e-08 63.5 160 36.9
PSO761G0634 Papaver somniferum HOM05D005001 ORTHO05D005796 2.4e-08 63.2 142 37.3
Hund19695 Selenicereus undatus HOM05D005001 ORTHO05D005796 3.2e-08 62.8 159 33.3
VMungo0251G3365 Vigna mungo HOM05D005001 ORTHO05D005796 4.1e-08 62.4 160 35.6
Aqoxy5G01010 Aquilegia oxysepala HOM05D005001 ORTHO05D005796 7.0e-08 61.6 152 34.9
BcaC06g36289 Brassica carinata HOM05D005001 ORTHO05D005796 9.2e-08 61.2 137 33.6
A07p03420 Brassica napus HOM05D005001 ORTHO05D005796 9.2e-08 61.2 137 33.6
BraA07t28140Z Brassica rapa HOM05D005001 ORTHO05D005796 9.2e-08 61.2 137 33.6
C07p05710 Brassica napus HOM05D005001 ORTHO05D005796 1.2e-07 60.8 137 32.8
BolC7t40970H Brassica oleracea HOM05D005001 ORTHO05D005796 1.2e-07 60.8 137 32.8
AL3G50520 Arabidopsis lyrata HOM05D005001 ORTHO05D005796 1.6e-07 60.5 147 32.0
BcaB03g16525 Brassica carinata HOM05D005001 ORTHO05D005796 1.6e-07 60.5 137 33.6
Aa31LG8G14850 Aethionema arabicum HOM05D005001 ORTHO05D005796 2.7e-07 59.7 131 32.1
SGA_v2.0_scaffold41G15753 Striga asiatica HOM05D005001 ORTHO05D005796 2.7e-07 59.7 135 36.3
AT2G17550 Arabidopsis thaliana HOM05D005001 ORTHO05D005796 4.6e-07 58.9 147 30.6
Carub.0003s3164 Capsella rubella HOM05D005001 ORTHO05D005796 4.6e-07 58.9 146 31.5
Thhalv10022564m.g Eutrema salsugineum HOM05D005001 ORTHO05D005796 4.6e-07 58.9 138 31.9
PSO210G6136 Papaver somniferum HOM05D005001 ORTHO05D005796 7.8e-07 58.2 142 37.3
Sp3g30910 Schrenkiella parvula HOM05D005001 ORTHO05D005796 7.8e-07 58.2 146 30.8
CARHR107730 Cardamine hirsuta HOM05D005001 ORTHO05D005796 3.0e-06 56.2 139 30.9


User provided reference genes

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