Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 2.6e-129 465.7 294 100.0
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 5.2e-85 318.5 300 62.0
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 1.2e-84 317.4 301 61.8
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 2.6e-84 316.2 311 60.1
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 7.8e-81 304.7 305 58.0
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 5.1e-80 302.0 303 57.8
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 2.0e-76 290.0 304 56.6
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 4.4e-76 288.9 304 55.9
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 7.6e-76 288.1 304 55.3
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 2.9e-75 286.2 304 55.9
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 4.9e-75 285.4 305 56.1
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 6.4e-75 285.0 304 55.6
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 1.4e-74 283.9 299 56.5
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 1.4e-74 283.9 305 56.1
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 1.9e-74 283.5 300 56.3
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 7.1e-74 281.6 305 55.7
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 1.5e-71 273.9 305 54.4
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.8e-69 266.9 290 56.9
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 2.6e-68 263.1 308 52.6
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 3.4e-68 262.7 301 66.1
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 5.8e-68 261.9 302 54.3
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 7.6e-68 261.5 291 55.3
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 1.7e-67 260.4 305 51.5
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 3.8e-67 259.2 296 54.7
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 3.8e-67 259.2 312 52.2
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 3.8e-67 259.2 291 55.3
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 2.4e-66 256.5 305 51.8
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 9.3e-66 254.6 291 55.0
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 2.7e-65 253.1 295 52.9
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 6.0e-65 251.9 302 49.3
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 2.3e-64 250.0 306 49.0
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 1.1e-61 241.1 291 52.2
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 1.1e-61 241.1 298 49.0
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.4e-61 240.7 270 56.3
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 5.3e-61 238.8 280 53.6
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 3.4e-60 236.1 268 54.5
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 4.5e-60 235.7 294 49.0
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 7.6e-60 235.0 298 48.3
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 7.6e-60 235.0 257 57.6
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 1.2e-57 227.6 297 49.8
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 6.0e-57 225.3 303 47.5
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 1.8e-56 223.8 302 48.0
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 1.5e-55 220.7 294 48.6
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 2.5e-55 219.9 217 59.0
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 2.5e-55 219.9 304 46.4
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 1.6e-54 217.2 300 47.3
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 3.4e-52 209.5 295 44.7
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 5.8e-52 208.8 294 46.6
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 4.9e-51 205.7 301 44.5
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 3.2e-50 203.0 314 42.7
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 6.0e-49 198.7 314 43.0
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 5.7e-39 165.6 299 39.8
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 1.6e-38 164.1 238 46.6
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 5.5e-34 149.1 154 56.5
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 1.2e-33 147.9 245 42.0
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 1.6e-33 147.5 196 51.0
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 1.3e-30 137.9 176 49.4
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 6.1e-25 119.0 230 39.1
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 3.1e-21 106.7 274 41.2
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 4.5e-20 102.8 74 71.6
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 2.0e-12 77.4 284 37.7


User provided reference genes

Program Settings