Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30155 Davidia involucrata HOM05D000753 ORTHO05D028375 6.4e-41 170.2 82 100.0
vmacro05184 Vaccinium macrocarpon HOM05D000753 ORTHO05D001988 1.3e-09 66.2 56 67.9
CSS0007674 Camellia sinensis var. sinensis HOM05D000753 ORTHO05D001988 1.7e-09 65.9 59 71.2
CSS0011353 Camellia sinensis var. sinensis HOM05D000753 ORTHO05D001988 1.7e-09 65.9 56 69.6
CSS0040050 Camellia sinensis var. sinensis HOM05D000753 ORTHO05D001988 1.7e-09 65.9 56 69.6
Manes.03G016000 Manihot esculenta HOM05D000753 ORTHO05D001988 3.2e-08 61.6 58 69.0
arahy.Tifrunner.gnm1.ann1.3SSI2G Arachis hypogaea HOM05D000753 ORTHO05D001988 9.3e-08 60.1 58 65.5
TAR383G0403 Trochodendron aralioides HOM05D000753 ORTHO05D001988 9.3e-08 60.1 56 69.6
CSS0002676 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D028375 1.2e-07 59.7 40 77.5
Cpa.g.c28770.3 Carica papaya HOM05D000753 ORTHO05D001988 1.2e-07 59.7 58 67.2
Thecc.09G027000 Theobroma cacao HOM05D000753 ORTHO05D001988 2.7e-07 58.5 58 67.2
TAR625G1255 Trochodendron aralioides HOM05D000753 ORTHO05D001988 3.5e-07 58.2 58 67.2
Duzib168G2147 Durio zibethinus HOM05D000753 ORTHO05D001988 4.6e-07 57.8 58 65.5
Hma1.2p1_0000F.1_g000250 Hydrangea macrophylla HOM05D000753 ORTHO05D001988 4.6e-07 57.8 56 66.1
C03p05640 Brassica napus HOM05D000753 ORTHO05D001988 6.1e-07 57.4 40 77.5
QL02p022110 Quercus lobata HOM05D000753 ORTHO05D001988 6.1e-07 57.4 39 82.1
Atru.chr7.2400 Acer truncatum HOM05D000753 ORTHO05D001988 7.9e-07 57.0 58 62.1
TAR626G1521 Trochodendron aralioides HOM05D000753 ORTHO05D001988 7.9e-07 57.0 56 66.1
CARHR202110 Cardamine hirsuta HOM05D000753 ORTHO05D001988 1.0e-06 56.6 41 78.0
CiPaw.07G221900 Carya illinoinensis HOM05D000753 ORTHO05D001988 1.0e-06 56.6 41 80.5
Thhalv10013985m.g Eutrema salsugineum HOM05D000753 ORTHO05D001988 1.0e-06 56.6 40 80.0
GSVIVG01015524001 Vitis vinifera HOM05D000753 ORTHO05D001988 1.0e-06 56.6 48 66.7
BraA03t09829Z Brassica rapa HOM05D000753 ORTHO05D001988 1.3e-06 56.2 39 76.9
CiPaw.03G243600 Carya illinoinensis HOM05D000753 ORTHO05D001988 1.3e-06 56.2 40 80.0
Duzib187G1492 Durio zibethinus HOM05D000753 ORTHO05D001988 1.3e-06 56.2 40 80.0
Manes.16G120800 Manihot esculenta HOM05D000753 ORTHO05D001988 1.3e-06 56.2 58 62.1
THA.LOC104799230 Tarenaya hassleriana HOM05D000753 ORTHO05D001988 1.3e-06 56.2 40 80.0
TAR625G0282 Trochodendron aralioides HOM05D000753 ORTHO05D001988 1.3e-06 56.2 56 66.1
Migut.A00051 Erythranthe guttata HOM05D000753 ORTHO05D001988 1.8e-06 55.8 56 64.3
Medtr4g114360 Medicago truncatula HOM05D000753 ORTHO05D001988 1.8e-06 55.8 58 62.1
Oeu003963.1 Olea europaea HOM05D000753 ORTHO05D001988 1.8e-06 55.8 57 64.9
TAR636G1487 Trochodendron aralioides HOM05D000753 ORTHO05D001988 1.8e-06 55.8 56 67.9
VMungo1309G1450 Vigna mungo HOM05D000753 ORTHO05D001988 1.8e-06 55.8 58 63.8
Cfa013163 Carpinus fangiana HOM05D000753 ORTHO05D001988 2.3e-06 55.5 40 80.0
A03p04910 Brassica napus HOM05D000753 ORTHO05D001988 3.0e-06 55.1 39 74.4
Medtr3g107470 Medicago truncatula HOM05D000753 ORTHO05D001988 3.0e-06 55.1 58 62.1
Oeu060158.1 Olea europaea HOM05D000753 ORTHO05D001988 3.0e-06 55.1 56 64.3
Phvul.003G164100 Phaseolus vulgaris HOM05D000753 ORTHO05D001988 3.0e-06 55.1 58 60.3
Carub.0006s0970 Capsella rubella HOM05D000753 ORTHO05D001988 5.1e-06 54.3 40 77.5
Haze_21534 Corylus avellana HOM05D000753 ORTHO05D001988 5.1e-06 54.3 40 77.5
MELO3C003692.2 Cucumis melo HOM05D000753 ORTHO05D001988 5.1e-06 54.3 58 60.3
CsaV3_3G046480 Cucumis sativus L. HOM05D000753 ORTHO05D001988 5.1e-06 54.3 58 60.3
Nn2g12016 Nelumbo nucifera HOM05D000753 ORTHO05D001988 5.1e-06 54.3 56 64.3
Nitab4.5_0000209g0040 Nicotiana tabacum HOM05D000753 ORTHO05D001988 5.1e-06 54.3 57 64.9
Sabra06G0197400 Salix brachista HOM05D000753 ORTHO05D001988 5.1e-06 54.3 58 62.1
CiPaw.04G170800 Carya illinoinensis HOM05D000753 ORTHO05D001988 6.7e-06 53.9 40 77.5
Ca_15729_v3 Cicer arietinum L. HOM05D000753 ORTHO05D001988 6.7e-06 53.9 58 60.3
COL.COLO4_18837 Corchorus olitorius HOM05D000753 ORTHO05D001988 6.7e-06 53.9 58 63.8
Peaxi162Scf00073g01310 Petunia axillaris HOM05D000753 ORTHO05D001988 6.7e-06 53.9 59 61.0
Ca_21685_v3 Cicer arietinum L. HOM05D000753 ORTHO05D001988 8.7e-06 53.5 58 58.6
Gohir.A05G054600 Gossypium hirsutum HOM05D000753 ORTHO05D001988 8.7e-06 53.5 58 63.8
Gohir.D05G056400 Gossypium hirsutum HOM05D000753 ORTHO05D001988 8.7e-06 53.5 58 63.8
Gorai.009G057400 Gossypium raimondii HOM05D000753 ORTHO05D001988 8.7e-06 53.5 58 63.8


User provided reference genes

Program Settings