Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 2.9e-82 308.5 156 100.0
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 2.9e-82 308.5 156 100.0
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 2.4e-81 305.4 156 99.4
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 5.2e-68 261.2 156 85.9
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 5.2e-68 261.2 156 85.3
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 9.9e-67 256.9 152 88.8
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 1.3e-66 256.5 156 84.0
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 1.4e-65 253.1 152 86.2
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 1.4e-65 253.1 156 85.9
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.9e-65 252.7 156 84.0
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 1.9e-65 252.7 156 82.7
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 7.1e-65 250.8 156 83.3
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.1e-64 249.2 156 82.7
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.1e-64 249.2 156 82.7
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 2.7e-64 248.8 157 83.4
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 3.5e-64 248.4 156 82.7
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 4.6e-64 248.1 156 82.1
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 4.6e-64 248.1 144 88.9
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.0e-63 246.9 150 86.0
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 1.7e-63 246.1 155 83.2
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 3.9e-63 245.0 156 80.8
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 5.1e-63 244.6 156 80.1
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 6.6e-63 244.2 156 80.8
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 8.7e-63 243.8 154 81.8
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 1.1e-62 243.4 144 87.5
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 1.9e-62 242.7 156 80.8
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 5.6e-62 241.1 130 92.3
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 9.6e-62 240.4 156 80.1
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 3.6e-61 238.4 156 83.3
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 6.2e-61 237.7 156 82.7
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 1.1e-60 236.9 156 78.8
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 2.4e-60 235.7 156 78.8
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 3.1e-60 235.3 156 78.2
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 3.1e-60 235.3 156 78.8
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 4.0e-60 235.0 156 78.8
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 5.3e-60 234.6 157 79.6
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 9.0e-60 233.8 156 80.1
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 9.0e-60 233.8 156 78.8
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 1.2e-59 233.4 156 77.6
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 2.0e-59 232.6 156 76.3
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 2.0e-59 232.6 156 82.1
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 4.5e-59 231.5 156 75.6
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 5.8e-59 231.1 158 77.2
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 5.8e-59 231.1 156 76.9
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 9.9e-59 230.3 156 76.9
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 9.9e-59 230.3 156 76.3
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 9.9e-59 230.3 156 78.8
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.7e-58 229.6 156 78.8
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 1.7e-58 229.6 156 77.6
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 3.8e-58 228.4 157 75.8
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 4.9e-58 228.0 156 79.5
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 6.4e-58 227.6 157 76.4
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 8.4e-58 227.3 157 77.1
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 2.4e-57 225.7 150 80.0
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 9.3e-57 223.8 124 91.1
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 9.3e-57 223.8 123 92.7
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 78.2
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.6e-56 223.0 158 77.2
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 2.1e-56 222.6 156 73.7
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 2.7e-56 222.2 158 75.9
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.7e-56 222.2 156 76.3
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.5e-56 221.9 157 77.7
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.5e-56 221.9 157 75.8
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 1.3e-55 219.9 159 74.8
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 3.0e-55 218.8 146 77.4
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 3.9e-55 218.4 162 75.3
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 1.1e-54 216.9 157 75.2
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 1.1e-54 216.9 156 73.7
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 1.5e-54 216.5 162 74.7
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 3.3e-54 215.3 156 74.4
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 3.3e-54 215.3 163 74.2
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 7.4e-54 214.2 136 81.6
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 7.4e-54 214.2 150 76.7
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 1.3e-53 213.4 163 73.0
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 2.1e-53 212.6 163 73.0
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.8e-53 212.2 159 74.8
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 3.7e-53 211.8 160 73.8
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 4.8e-53 211.5 157 75.2
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 4.8e-53 211.5 136 79.4
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.2e-53 211.1 160 71.9
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.1e-52 210.3 163 72.4
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.1e-52 210.3 163 72.4
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 2.4e-52 209.1 164 71.3
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 5.3e-52 208.0 135 81.5
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 1.2e-51 206.8 165 70.9
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 115 93.9
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 7.6e-51 204.1 124 86.3
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 7.6e-51 204.1 115 87.8
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 4.2e-49 198.4 116 85.3
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 5.1e-47 191.4 127 81.1
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 6.7e-47 191.0 127 77.2
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 8.7e-47 190.7 143 74.1
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 1.6e-45 186.4 127 77.2
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 3.7e-45 185.3 116 83.6
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 4.8e-45 184.9 130 73.8
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 8.2e-45 184.1 127 76.4
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.4e-44 183.3 141 68.8
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 4.0e-44 181.8 129 72.9
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 9.0e-44 180.6 116 77.6
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.2e-43 180.3 156 64.1
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 1.3e-42 176.8 128 71.1
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 7.1e-41 171.0 148 64.2
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 9.3e-41 170.6 128 72.7
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 2.3e-39 166.0 107 74.8
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 6.7e-39 164.5 131 65.6
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 5.7e-38 161.4 104 76.0
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 9.7e-38 160.6 137 61.3
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 7.9e-32 141.0 86 80.2
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.8e-15 86.7 64 73.4
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 3.7e-13 79.0 110 43.6
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.1e-12 77.4 68 54.4
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 5.2e-07 58.5 107 37.4


User provided reference genes

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