Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30045 Davidia involucrata HOM05D003446 ORTHO05D003915 1.7e-85 319.3 159 100.0
Dinv30043 Davidia involucrata HOM05D003446 ORTHO05D003915 6.1e-80 300.8 177 87.6
Dinv26875 Davidia involucrata HOM05D003446 ORTHO05D003915 1.3e-66 256.5 175 74.9
Hma1.2p1_0017F.1_g011890 Hydrangea macrophylla HOM05D003446 ORTHO05D003915 1.3e-50 203.4 179 63.1
vmacro17976 Vaccinium macrocarpon HOM05D003446 ORTHO05D003915 1.7e-50 203.0 176 63.1
Hma1.2p1_3153F.1_g333290 Hydrangea macrophylla HOM05D003446 ORTHO05D003915 1.5e-46 189.9 171 62.0
Actinidia21252 Actinidia chinensis HOM05D003446 ORTHO05D003915 3.5e-43 178.7 181 57.5
Cc07_g06490 Coffea canephora HOM05D003446 ORTHO05D003915 5.0e-42 174.9 179 55.9
Actinidia16456 Actinidia chinensis HOM05D003446 ORTHO05D003915 1.9e-41 172.9 173 58.4
Duzib147G1454 Durio zibethinus HOM05D003446 ORTHO05D003915 1.9e-41 172.9 187 56.7
Thecc.01G064800 Theobroma cacao HOM05D003446 ORTHO05D003915 4.7e-40 168.3 186 54.8
Gohir.D12G071400 Gossypium hirsutum HOM05D003446 ORTHO05D003915 6.2e-40 167.9 179 54.7
GSVIVG01000208001 Vitis vinifera HOM05D003446 ORTHO05D003915 5.2e-39 164.9 185 53.5
TAR376G0778 Trochodendron aralioides HOM05D003446 ORTHO05D003915 8.9e-39 164.1 185 54.6
Gohir.A12G074100 Gossypium hirsutum HOM05D003446 ORTHO05D003915 1.5e-38 163.3 179 54.2
Gorai.008G079000 Gossypium raimondii HOM05D003446 ORTHO05D003915 2.0e-38 162.9 179 53.6
MSTRG.2847 Avicennia marina HOM05D003446 ORTHO05D003915 2.6e-38 162.5 180 52.8
QL06p039988 Quercus lobata HOM05D003446 ORTHO05D003915 2.6e-38 162.5 178 51.7
Sabra07G0044000 Salix brachista HOM05D003446 ORTHO05D003915 3.4e-38 162.2 184 54.9
Haze_15338 Corylus avellana HOM05D003446 ORTHO05D003915 9.8e-38 160.6 179 53.1
Cfa004075 Carpinus fangiana HOM05D003446 ORTHO05D003915 1.4e-36 156.8 184 52.7
Manes.13G117600 Manihot esculenta HOM05D003446 ORTHO05D003915 3.2e-36 155.6 179 53.1
FAN28G0024 Fragaria x ananassa HOM05D003446 ORTHO05D003915 4.1e-36 155.2 180 51.1
RcHm_v2.0_Chr2g0106961 Rosa chinensis HOM05D003446 ORTHO05D003915 7.1e-36 154.5 182 50.5
FvH4_1g16910 Fragaria vesca HOM05D003446 ORTHO05D003915 9.2e-36 154.1 180 51.1
PGSC0003DMG400024982 Solanum tuberosum HOM05D003446 ORTHO05D003915 1.6e-35 153.3 171 53.8
Oeu015921.1 Olea europaea HOM05D003446 ORTHO05D003915 2.7e-35 152.5 183 50.8
CSS0013529 Camellia sinensis var. sinensis HOM05D003446 ORTHO05D003915 3.5e-35 152.1 163 55.8
Ciclev10026594m.g Citrus clementina HOM05D003446 ORTHO05D003915 6.0e-35 151.4 180 52.8
FAN19G2839 Fragaria x ananassa HOM05D003446 ORTHO05D003915 7.8e-35 151.0 178 50.6
Sopen02g037450 Solanum pennellii HOM05D003446 ORTHO05D003915 1.3e-34 150.2 171 53.2
CSS0024799 Camellia sinensis var. sinensis HOM05D003446 ORTHO05D003915 2.3e-34 149.4 160 56.9
Potri.007G049800 Populus trichocarpa HOM05D003446 ORTHO05D003915 2.3e-34 149.4 184 52.2
Prupe.6G227700 Prunus persica HOM05D003446 ORTHO05D003915 1.1e-33 147.1 184 49.5
Lsat_1_v5_gn_4_162940 Lactuca sativa HOM05D003446 ORTHO05D003915 1.5e-33 146.7 181 49.2
Solyc02g092880.3 Solanum lycopersicum HOM05D003446 ORTHO05D003915 3.3e-33 145.6 170 52.4
Hund16368 Selenicereus undatus HOM05D003446 ORTHO05D003915 2.1e-32 142.9 174 49.4
CiPaw.01G009700 Carya illinoinensis HOM05D003446 ORTHO05D003915 2.8e-32 142.5 179 49.2
Cpa.g.sc6.90 Carica papaya HOM05D003446 ORTHO05D003915 4.7e-32 141.7 179 50.3
Eucgr.I00795 Eucalyptus grandis HOM05D003446 ORTHO05D003915 8.1e-32 141.0 183 50.8
TWI53G2047 Tripterygium wilfordii HOM05D003446 ORTHO05D003915 8.1e-32 141.0 182 48.4
HanXRQChr15g0491841 Helianthus annuus HOM05D003446 ORTHO05D003915 1.4e-31 140.2 179 49.2
THA.LOC104819864 Tarenaya hassleriana HOM05D003446 ORTHO05D003915 4.0e-31 138.7 185 46.5
Duzib187G1258 Durio zibethinus HOM05D003446 ORTHO05D003915 6.8e-31 137.9 168 50.0
Lj2g0019205 Lotus japonicus HOM05D003446 ORTHO05D003915 1.7e-29 133.3 169 46.7
PGR004G1858 Punica granatum HOM05D003446 ORTHO05D003915 1.7e-29 133.3 176 47.2
Eucgr.I00751 Eucalyptus grandis HOM05D003446 ORTHO05D003915 2.9e-29 132.5 182 48.9
Nitab4.5_0001439g0030 Nicotiana tabacum HOM05D003446 ORTHO05D003915 3.7e-29 132.1 159 52.2
Glyma.01G190300 Glycine max HOM05D003446 ORTHO05D003915 6.4e-29 131.3 165 45.5
TAR381G0964 Trochodendron aralioides HOM05D003446 ORTHO05D003915 6.4e-29 131.3 163 50.9
TPR.G26863 Trifolium pratense HOM05D003446 ORTHO05D003915 1.4e-28 130.2 182 40.7
VMungo1215G1902 Vigna mungo HOM05D003446 ORTHO05D003915 1.9e-28 129.8 177 43.5
MELO3C019205.2 Cucumis melo HOM05D003446 ORTHO05D003915 3.2e-28 129.0 177 42.9
Nn5g30439 Nelumbo nucifera HOM05D003446 ORTHO05D003915 9.2e-28 127.5 169 48.5
Phvul.002G014901 Phaseolus vulgaris HOM05D003446 ORTHO05D003915 1.6e-27 126.7 177 44.6
CARHR245700 Cardamine hirsuta HOM05D003446 ORTHO05D003915 2.7e-27 125.9 172 43.0
Thhalv10026399m.g Eutrema salsugineum HOM05D003446 ORTHO05D003915 3.5e-27 125.6 171 46.2
C01p01830 Brassica napus HOM05D003446 ORTHO05D003915 7.8e-27 124.4 176 44.3
arahy.Tifrunner.gnm1.ann1.SZPL62 Arachis hypogaea HOM05D003446 ORTHO05D003915 2.3e-26 122.9 183 43.7
A01p01670 Brassica napus HOM05D003446 ORTHO05D003915 3.0e-26 122.5 176 43.8
BraA01t00157Z Brassica rapa HOM05D003446 ORTHO05D003915 3.0e-26 122.5 176 43.8
AL7G13540 Arabidopsis lyrata HOM05D003446 ORTHO05D003915 5.1e-26 121.7 169 43.2
Medtr5g016450 Medicago truncatula HOM05D003446 ORTHO05D003915 5.1e-26 121.7 181 42.5
ClCG02G008200 Citrullus lanatus HOM05D003446 ORTHO05D003915 6.6e-26 121.3 179 41.9
BcaNung02537 Brassica carinata HOM05D003446 ORTHO05D003915 1.5e-25 120.2 176 43.2
BcaNung02538 Brassica carinata HOM05D003446 ORTHO05D003915 1.5e-25 120.2 176 43.2
AT4G37300 Arabidopsis thaliana HOM05D003446 ORTHO05D003915 1.9e-25 119.8 170 44.1
EL10Ac6g15684 Beta vulgaris HOM05D003446 ORTHO05D003915 1.9e-25 119.8 183 41.5
CsaV3_2G035470 Cucumis sativus L. HOM05D003446 ORTHO05D003915 1.9e-25 119.8 177 41.2
BolC1t00175H Brassica oleracea HOM05D003446 ORTHO05D003915 3.3e-25 119.0 176 42.6
BolC7t46649H Brassica oleracea HOM05D003446 ORTHO05D003915 4.3e-25 118.6 169 42.0
Sp7g34970 Schrenkiella parvula HOM05D003446 ORTHO05D003915 4.3e-25 118.6 173 42.8
C07p62330 Brassica napus HOM05D003446 ORTHO05D003915 5.6e-25 118.2 169 42.0
Aa31LG6G14170 Aethionema arabicum HOM05D003446 ORTHO05D003915 9.6e-25 117.5 175 42.9
Glyma.11G051900 Glycine max HOM05D003446 ORTHO05D003915 1.2e-24 117.1 178 43.8
BcaNung02048 Brassica carinata HOM05D003446 ORTHO05D003915 2.1e-24 116.3 169 41.4
Ca_24736_v3 Cicer arietinum L. HOM05D003446 ORTHO05D003915 3.6e-24 115.5 179 43.0
Carub.0007s0298 Capsella rubella HOM05D003446 ORTHO05D003915 8.1e-24 114.4 170 42.9
Nn1g04669 Nelumbo nucifera HOM05D003446 ORTHO05D003915 1.8e-23 113.2 186 40.3
Sc03g0001910 Simmondsia chinensis HOM05D003446 ORTHO05D003915 8.4e-21 104.4 174 40.2
BcaNung02955 Brassica carinata HOM05D003446 ORTHO05D003915 1.4e-20 103.6 179 38.0
COL.COLO4_11498 Corchorus olitorius HOM05D003446 ORTHO05D003915 1.4e-20 103.6 152 46.1
Ah.02g125720 Amaranthus hybridus HOM05D026984 ORTHO05D003915 1.6e-19 100.1 140 41.4
SEGI_03543 Sequoiadendron giganteum HOM05D003446 ORTHO05D003915 1.3e-18 97.1 168 39.9
MD02G1179600 Malus domestica HOM05D003446 ORTHO05D003915 8.7e-18 94.4 166 40.4
Peaxi162Scf00945g00123 Petunia axillaris HOM05D003446 ORTHO05D003915 2.8e-16 89.4 99 55.6
Psat2g168880 Pisum sativum HOM05D003446 ORTHO05D003915 8.1e-16 87.8 105 49.5
SEGI_14129 Sequoiadendron giganteum HOM05D003446 ORTHO05D003915 9.0e-15 84.3 167 35.3
arahy.Tifrunner.gnm1.ann1.CXZ5TN Arachis hypogaea HOM05D003446 ORTHO05D003915 2.0e-14 83.2 93 51.6
CAN.G538.3 Capsicum annuum HOM05D003446 ORTHO05D003915 3.4e-14 82.4 172 33.1
PGR119G0877 Punica granatum HOM05D003446 ORTHO05D003915 9.9e-14 80.9 178 35.4
ECA236G4759 Erigeron canadensis HOM05D003446 ORTHO05D003915 2.2e-13 79.7 172 34.9
MSTRG.17869 Avicennia marina HOM05D003446 ORTHO05D003915 2.9e-13 79.3 169 33.7
Gohir.A03G048300 Gossypium hirsutum HOM05D003446 ORTHO05D003915 4.9e-13 78.6 166 33.7
EL10Ac7g16108 Beta vulgaris HOM05D003446 ORTHO05D003915 6.4e-13 78.2 168 33.3
Migut.N00812 Erythranthe guttata HOM05D003446 ORTHO05D003915 8.4e-13 77.8 169 31.4
Glyma.18G067500 Glycine max HOM05D003446 ORTHO05D003915 8.4e-13 77.8 174 32.2
CiPaw.08G174200 Carya illinoinensis HOM05D003446 ORTHO05D003915 1.1e-12 77.4 115 42.6
AUR62020077 Chenopodium quinoa HOM05D003446 ORTHO05D003915 1.1e-12 77.4 169 33.1
Duzib168G0523 Durio zibethinus HOM05D003446 ORTHO05D003915 1.4e-12 77.0 168 33.3
Gohir.D03G118800 Gossypium hirsutum HOM05D003446 ORTHO05D003915 1.4e-12 77.0 166 33.7
Sed0017405 Sechium edule HOM05D003446 ORTHO05D003915 1.4e-12 77.0 169 34.3
HanXRQChr05g0135531 Helianthus annuus HOM05D003446 ORTHO05D003915 1.9e-12 76.6 172 34.3
Gorai.003G125200 Gossypium raimondii HOM05D003446 ORTHO05D003915 3.2e-12 75.9 166 33.7
Nn2g11351 Nelumbo nucifera HOM05D003446 ORTHO05D003915 4.2e-12 75.5 167 32.9
ATR0618G355 Amborella trichopoda HOM05D003446 ORTHO05D003915 5.4e-12 75.1 169 33.7
GSVIVG01024811001 Vitis vinifera HOM05D003446 ORTHO05D003915 5.4e-12 75.1 169 34.9
Os05g0451300 Oryza sativa ssp. japonica HOM05D003446 ORTHO05D003915 7.1e-12 74.7 171 34.5
CiPaw.13G082900 Carya illinoinensis HOM05D003446 ORTHO05D003915 9.3e-12 74.3 171 32.2
AUR62001704 Chenopodium quinoa HOM05D003446 ORTHO05D003915 1.6e-11 73.6 169 32.5
PGSC0003DMG400020844 Solanum tuberosum HOM05D003446 ORTHO05D003915 1.6e-11 73.6 173 32.4
CDE03G0004 Ceratophyllum demersum HOM05D003446 ORTHO05D003915 2.1e-11 73.2 168 31.5
Dinv14473 Davidia involucrata HOM05D003446 ORTHO05D003915 2.1e-11 73.2 171 33.3
arahy.Tifrunner.gnm1.ann1.TI8HRK Arachis hypogaea HOM05D003446 ORTHO05D003915 2.7e-11 72.8 168 32.1
FAN25G0028 Fragaria x ananassa HOM05D003446 ORTHO05D003915 2.7e-11 72.8 167 32.3
Nitab4.5_0000880g0040 Nicotiana tabacum HOM05D003446 ORTHO05D003915 2.7e-11 72.8 152 29.6
Os03g0265900 Oryza sativa ssp. japonica HOM05D003446 ORTHO05D003915 2.7e-11 72.8 168 30.4
CsaV3_1G035970 Cucumis sativus L. HOM05D003446 ORTHO05D003915 3.5e-11 72.4 170 32.9
Manes.02G122700 Manihot esculenta HOM05D003446 ORTHO05D003915 3.5e-11 72.4 172 32.6
SGA_v2.0_scaffold77G25285 Striga asiatica HOM05D003446 ORTHO05D003915 3.5e-11 72.4 166 33.1
CDE04G1890 Ceratophyllum demersum HOM05D003446 ORTHO05D003915 4.6e-11 72.0 168 32.7
AagrBONN_evm.TU.Sc2ySwM_228.1259 Anthoceros agrestis HOM05D001230 ORTHO05D001067 6.0e-11 71.6 169 35.5
Aqoxy1G00728 Aquilegia oxysepala HOM05D003446 ORTHO05D003915 7.9e-11 71.2 169 31.4
Cc01_g13730 Coffea canephora HOM05D003446 ORTHO05D003915 7.9e-11 71.2 168 31.5
Atru.chr3.4056 Acer truncatum HOM05D003446 ORTHO05D003915 1.0e-10 70.9 174 32.8
arahy.Tifrunner.gnm1.ann1.6X3X3D Arachis hypogaea HOM05D003446 ORTHO05D003915 1.0e-10 70.9 168 32.1
Cfa011633 Carpinus fangiana HOM05D003446 ORTHO05D003915 1.0e-10 70.9 172 32.6
Peaxi162Scf00842g00015 Petunia axillaris HOM05D003446 ORTHO05D003915 1.0e-10 70.9 171 30.4
Actinidia25129 Actinidia chinensis HOM05D003446 ORTHO05D003915 1.3e-10 70.5 168 31.0
FAN16G2611 Fragaria x ananassa HOM05D003446 ORTHO05D003915 1.3e-10 70.5 167 31.7
Peaxi162Scf00216g01419 Petunia axillaris HOM05D003446 ORTHO05D003915 1.3e-10 70.5 171 29.2
Potri.009G041100 Populus trichocarpa HOM05D003446 ORTHO05D003915 1.3e-10 70.5 169 31.4
Sopen06g001980 Solanum pennellii HOM05D003446 ORTHO05D003915 1.3e-10 70.5 173 32.4
Thecc.09G307400 Theobroma cacao HOM05D003446 ORTHO05D003915 1.3e-10 70.5 170 32.4
VMungo0540G2401 Vigna mungo HOM05D003446 ORTHO05D003915 1.3e-10 70.5 169 30.8
Glyma.08G334500 Glycine max HOM05D003446 ORTHO05D003915 1.7e-10 70.1 163 32.5
Nitab4.5_0002405g0050 Nicotiana tabacum HOM05D003446 ORTHO05D003915 1.7e-10 70.1 161 28.6
Rhsim13G0074100 Rhododendron simsii HOM05D003446 ORTHO05D003915 1.7e-10 70.1 167 30.5
RcHm_v2.0_Chr5g0068081 Rosa chinensis HOM05D003446 ORTHO05D003915 1.7e-10 70.1 169 33.1
Phvul.006G063800 Phaseolus vulgaris HOM05D003446 ORTHO05D003915 2.3e-10 69.7 170 31.2
Ca_14891_v3 Cicer arietinum L. HOM05D003446 ORTHO05D003915 3.0e-10 69.3 172 30.8
COL.COLO4_19086 Corchorus olitorius HOM05D003446 ORTHO05D003915 3.0e-10 69.3 170 32.9
Actinidia38843 Actinidia chinensis HOM05D003446 ORTHO05D003915 5.1e-10 68.6 172 30.8
Lj6g0014075 Lotus japonicus HOM05D003446 ORTHO05D003915 5.1e-10 68.6 169 30.2
PSO339G6551 Papaver somniferum HOM05D003446 ORTHO05D003915 5.1e-10 68.6 176 31.8
Prupe.6G063000 Prunus persica HOM05D003446 ORTHO05D003915 5.1e-10 68.6 170 31.8
HPP92_015338 Vanilla planifolia HOM05D003446 ORTHO05D003915 5.1e-10 68.6 171 30.4
Solyc06g006000.3 Solanum lycopersicum HOM05D003446 ORTHO05D003915 6.6e-10 68.2 173 31.8
TPR.G30108 Trifolium pratense HOM05D003446 ORTHO05D003915 6.6e-10 68.2 172 32.6
PSO384G2641 Papaver somniferum HOM05D003446 ORTHO05D003915 8.7e-10 67.8 174 32.2
CSS0014722 Camellia sinensis var. sinensis HOM05D003446 ORTHO05D003915 1.1e-09 67.4 169 30.8
Oeu035016.1 Olea europaea HOM05D003446 ORTHO05D003915 1.1e-09 67.4 169 29.6
unitig_26.g10204 Utricularia gibba HOM05D003446 ORTHO05D003915 1.9e-09 66.6 166 34.9
QL01p027392 Quercus lobata HOM05D003446 ORTHO05D003915 2.5e-09 66.2 178 29.8
QL93p2004_0016 Quercus lobata HOM05D003446 ORTHO05D003915 2.5e-09 66.2 178 29.8
Ciclev10029307m.g Citrus clementina HOM05D003446 ORTHO05D003915 3.3e-09 65.9 201 27.4
SMO351G0520 Selaginella moellendorffii HOM05D003446 ORTHO05D003915 3.3e-09 65.9 153 31.4
CANSAT54G0299 Cannabis sativa HOM05D003446 ORTHO05D003915 4.3e-09 65.5 179 31.3
FvH4_3g37870 Fragaria vesca HOM05D003446 ORTHO05D003915 4.3e-09 65.5 167 30.5
FAN11G3995 Fragaria x ananassa HOM05D003446 ORTHO05D003915 4.3e-09 65.5 167 30.5
Zm00001eb288700 Zea mays HOM05D003446 ORTHO05D003915 4.3e-09 65.5 175 29.7
Haze_24238 Corylus avellana HOM05D003446 ORTHO05D003915 7.3e-09 64.7 160 33.1
Lalb_Chr15g0082611 Lupinus albus HOM05D003446 ORTHO05D003915 7.3e-09 64.7 173 30.1
MD03G1078000 Malus domestica HOM05D003446 ORTHO05D003915 7.3e-09 64.7 149 34.2
SalBow2G2679 Salvia bowleyana HOM05D003446 ORTHO05D003915 7.3e-09 64.7 148 30.4
Lsat_1_v5_gn_8_72121 Lactuca sativa HOM05D003446 ORTHO05D003915 9.6e-09 64.3 153 32.7
DCAR_018941 Daucus carota HOM05D003446 ORTHO05D003915 1.3e-08 63.9 169 30.2
Hund18865 Selenicereus undatus HOM05D003446 ORTHO05D003915 1.6e-08 63.5 155 29.0
MD11G1082600 Malus domestica HOM05D003446 ORTHO05D003915 2.8e-08 62.8 157 31.2
ATR0205G002 Amborella trichopoda HOM05D003446 ORTHO05D003915 3.6e-08 62.4 189 29.6
Lj1A143T43 Lonicera japonica HOM05D003446 ORTHO05D003915 6.2e-08 61.6 153 32.7
unitig_749.g13766 Utricularia gibba HOM05D003446 ORTHO05D003915 6.2e-08 61.6 166 31.3
Medtr3g462220 Medicago truncatula HOM05D003446 ORTHO05D003915 8.1e-08 61.2 172 30.8
Eucgr.J01950 Eucalyptus grandis HOM05D003446 ORTHO05D003915 1.1e-07 60.8 161 29.8
TAR402G0007 Trochodendron aralioides HOM05D003446 ORTHO05D003915 1.4e-07 60.5 155 31.6
vmacro03001 Vaccinium macrocarpon HOM05D003446 ORTHO05D003915 3.1e-07 59.3 162 28.4
TWI79G0878 Tripterygium wilfordii HOM05D003446 ORTHO05D003915 4.0e-07 58.9 153 29.4
FAN21G1385 Fragaria x ananassa HOM05D003446 ORTHO05D003915 6.9e-07 58.2 149 30.2
Peaxi162Scf00945g00122 Petunia axillaris HOM05D003446 ORTHO05D003915 1.5e-06 57.0 47 59.6
Cpa.g.sc6.87 Carica papaya HOM05D003446 ORTHO05D003915 3.4e-06 55.8 74 41.9
Sabra09G0028900 Salix brachista HOM05D003446 ORTHO05D003915 3.4e-06 55.8 150 30.0


User provided reference genes

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