Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 1.8e-213 745.7 391 100.0
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 1.2e-134 483.8 424 64.6
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 1.6e-134 483.4 419 66.3
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 1.1e-133 480.7 395 64.1
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 4.0e-133 478.8 413 64.4
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 2.2e-131 473.0 409 63.1
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 4.2e-130 468.8 356 68.3
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 4.6e-129 465.3 421 61.3
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 3.3e-127 459.1 426 58.2
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 4.3e-127 458.8 381 62.5
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 5.6e-127 458.4 420 60.7
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 5.6e-127 458.4 361 66.8
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 5.6e-127 458.4 415 60.0
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 1.6e-126 456.8 399 61.7
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 1.6e-126 456.8 408 64.0
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.6e-126 456.8 421 63.9
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.6e-126 456.8 421 63.9
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.1e-126 456.4 399 61.7
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 2.8e-126 456.1 354 65.8
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 3.6e-126 455.7 365 64.4
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 4.8e-126 455.3 399 61.4
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 6.2e-126 454.9 364 64.3
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 1.4e-125 453.8 364 64.6
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 2.4e-125 453.0 363 66.4
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 2.4e-125 453.0 359 66.3
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 6.9e-125 451.4 414 60.9
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 1.5e-124 450.3 366 63.9
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.5e-124 450.3 365 64.9
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 2.0e-124 449.9 365 64.4
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 5.8e-124 448.4 362 62.4
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 7.6e-124 448.0 413 60.8
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 7.6e-124 448.0 363 64.7
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 9.9e-124 447.6 412 60.4
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 1.7e-123 446.8 356 64.9
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 2.2e-123 446.4 362 61.9
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 3.8e-123 445.7 395 60.3
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 4.9e-123 445.3 364 65.1
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 6.4e-123 444.9 367 64.9
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 1.9e-122 443.4 424 57.5
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 2.4e-122 443.0 361 64.0
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 2.4e-122 443.0 414 57.5
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.4e-122 443.0 364 64.8
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 5.4e-122 441.8 425 57.2
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 9.3e-122 441.0 365 62.5
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 1.2e-121 440.7 363 63.6
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.2e-121 440.7 360 63.9
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 2.7e-121 439.5 414 58.5
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 4.6e-121 438.7 357 63.3
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 1.0e-120 437.6 423 58.9
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 2.3e-120 436.4 345 67.5
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 2.3e-120 436.4 398 58.8
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 3.0e-120 436.0 361 62.9
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 8.7e-120 434.5 364 62.9
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.9e-119 433.3 358 63.4
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 3.3e-119 432.6 371 60.9
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 7.4e-119 431.4 402 58.2
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 1.1e-117 427.6 372 60.8
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 1.4e-117 427.2 360 62.2
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 1.4e-117 427.2 362 61.6
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 3.1e-117 426.0 363 62.8
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 3.1e-117 426.0 366 58.7
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 6.9e-117 424.9 361 61.8
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 6.9e-117 424.9 357 62.5
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 2.6e-116 422.9 411 55.7
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 5.8e-116 421.8 433 54.3
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 5.8e-116 421.8 408 56.1
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 7.6e-116 421.4 356 62.4
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 7.6e-116 421.4 364 60.7
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 1.3e-115 420.6 366 59.3
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 1.7e-115 420.2 358 62.3
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 2.2e-115 419.9 356 60.7
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 4.9e-115 418.7 360 59.7
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 1.4e-114 417.2 360 60.3
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 1.4e-114 417.2 385 58.4
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 3.2e-114 416.0 356 60.1
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 4.2e-114 415.6 356 60.1
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 7.1e-114 414.8 357 62.2
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 1.2e-113 414.1 358 60.6
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 2.7e-113 412.9 356 59.6
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 2.7e-113 412.9 359 58.8
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 3.5e-113 412.5 356 60.1
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 4.6e-113 412.1 356 59.8
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 4.6e-113 412.1 356 59.8
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 7.9e-113 411.4 357 64.7
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 1.0e-112 411.0 356 60.1
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 1.0e-112 411.0 370 57.6
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 1.5e-111 407.1 356 59.8
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 9.6e-111 404.4 360 61.1
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 6.2e-110 401.7 363 59.8
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.4e-109 400.6 373 59.0
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 4.0e-109 399.1 373 58.7
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 1.2e-108 397.5 381 55.9
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 1.1e-106 391.0 362 56.6
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 1.6e-105 387.1 355 56.6
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 1.5e-103 380.6 361 57.1
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 1.9e-103 380.2 363 56.7
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 4.8e-102 375.6 370 54.1
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 1.8e-101 373.6 414 54.1
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 3.4e-100 369.4 365 56.7
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 1.1e-90 337.8 360 50.6
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 2.3e-88 330.1 384 46.9
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 1.5e-87 327.4 368 50.8
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 2.2e-86 323.6 362 48.9
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 3.7e-86 322.8 356 50.6
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 5.3e-85 318.9 359 49.6
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 9.1e-85 318.2 375 49.3
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 2.6e-84 316.6 353 52.7
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 3.8e-83 312.8 368 46.7
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 6.5e-83 312.0 268 60.1
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 3.6e-81 306.2 358 45.8
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 8.5e-75 285.0 315 53.7
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 1.4e-64 251.1 279 53.8
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 4.4e-63 246.1 142 80.3
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 4.4e-63 246.1 142 80.3
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 2.2e-62 243.8 303 46.5
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 1.1e-61 241.5 356 41.0
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 5.0e-59 232.6 381 38.1
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 6.8e-56 222.2 221 52.9
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 6.6e-51 205.7 359 39.0
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 1.0e-48 198.4 115 81.7
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 1.1e-45 188.3 137 66.4
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.2e-39 168.3 126 65.1
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.1e-37 161.8 142 63.4
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 1.6e-36 157.9 421 29.9
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 8.1e-33 145.6 101 73.3
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 6.8e-32 142.5 83 81.9
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 4.3e-26 123.2 343 32.4
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 1.1e-24 118.6 380 30.3
Aa31LG1G18450 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.9e-11 73.6 73 52.1
Aa31sc2295G10 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.9e-11 73.6 73 52.1
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 9.6e-10 68.9 66 51.5


User provided reference genes

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