Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 4.4e-158 561.2 279 100.0
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 1.9e-89 333.2 368 54.9
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 1.1e-87 327.4 367 51.2
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 4.1e-87 325.5 370 53.5
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 7.9e-75 284.6 368 47.0
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 8.8e-74 281.2 337 51.3
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 1.7e-72 276.9 370 48.6
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 1.3e-69 267.3 370 45.1
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 1.7e-69 266.9 369 47.2
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 2.5e-68 263.1 365 47.4
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 1.4e-66 257.3 368 44.8
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 3.9e-66 255.8 370 45.7
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 3.9e-66 255.8 473 38.7
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 5.2e-66 255.4 369 45.3
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.7e-64 250.4 369 44.7
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 2.2e-64 250.0 368 44.3
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 2.8e-64 249.6 371 45.0
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 6.3e-64 248.4 371 45.0
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 8.2e-64 248.1 370 45.1
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 8.2e-64 248.1 370 45.1
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 8.2e-64 248.1 368 44.0
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 2.4e-63 246.5 369 43.6
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 4.1e-63 245.7 355 46.5
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 5.3e-63 245.4 370 44.3
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 9.1e-63 244.6 370 44.6
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 1.0e-61 241.1 369 43.1
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 3.8e-61 239.2 360 44.2
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 1.1e-60 237.7 371 43.7
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 1.9e-60 236.9 370 43.2
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 5.5e-60 235.3 366 44.0
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 5.5e-60 235.3 368 44.6
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 7.2e-60 235.0 370 42.4
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 9.4e-60 234.6 368 42.4
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 9.4e-60 234.6 367 42.2
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 1.2e-59 234.2 369 42.8
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 1.2e-59 234.2 369 42.8
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 2.1e-59 233.4 362 43.1
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 6.1e-59 231.9 365 42.5
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 6.1e-59 231.9 365 42.5
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 8.0e-59 231.5 365 42.7
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 8.0e-59 231.5 372 43.3
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 8.0e-59 231.5 375 41.3
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 1.0e-58 231.1 371 42.6
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.4e-58 230.7 369 41.5
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 1.4e-58 230.7 370 42.4
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.8e-58 230.3 365 42.7
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 2.3e-58 229.9 368 42.4
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 6.7e-58 228.4 365 42.2
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 6.7e-58 228.4 361 42.7
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 6.7e-58 228.4 366 42.1
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 8.8e-58 228.0 372 42.5
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 1.2e-57 227.6 561 34.4
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 4.4e-57 225.7 371 40.7
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 7.5e-57 224.9 440 38.0
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 7.5e-57 224.9 369 42.5
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.3e-56 224.2 369 42.0
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.3e-56 224.2 377 41.1
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.8e-56 223.0 368 41.8
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 3.7e-56 222.6 361 43.5
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 8.2e-56 221.5 381 40.2
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 1.8e-55 220.3 370 41.1
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 5.3e-55 218.8 366 41.8
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 7.0e-55 218.4 362 43.6
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 7.0e-55 218.4 370 39.7
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 3.5e-54 216.1 358 43.3
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 7.7e-54 214.9 365 40.3
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.7e-53 213.8 364 38.7
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 3.8e-53 212.6 367 39.8
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 5.0e-53 212.2 365 40.0
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.9e-52 210.3 362 42.0
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 4.2e-52 209.1 364 38.7
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.1e-51 206.8 362 42.0
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 2.1e-51 206.8 350 38.9
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 3.0e-50 203.0 323 41.8
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.0e-50 202.6 361 40.7
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 1.2e-49 201.1 368 38.9
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.0e-49 200.3 365 37.8
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 7.5e-49 198.4 368 39.9
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.3e-48 197.6 372 37.9
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 3.7e-48 196.1 358 36.9
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 4.8e-48 195.7 366 37.7
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.9e-46 188.7 356 38.8
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 7.7e-46 188.3 368 36.4
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.2e-44 182.6 356 39.6
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 1.6e-43 180.6 373 37.3
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 8.0e-43 178.3 338 37.9
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 5.2e-42 175.6 279 40.1
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 4.1e-39 166.0 370 35.4
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 6.6e-37 158.7 133 64.7
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 8.6e-37 158.3 365 32.6
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 4.7e-35 152.5 375 32.3
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 8.0e-35 151.8 133 63.9
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 4.0e-34 149.4 374 32.9
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 2.0e-33 147.1 321 35.5
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 9.8e-33 144.8 372 33.6
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 6.4e-32 142.1 371 31.5
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 9.2e-31 138.3 360 31.1
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 9.2e-31 138.3 374 30.2
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.7e-29 134.0 376 30.3
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 3.9e-29 132.9 363 33.1
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 2.8e-27 126.7 340 32.6
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 2.6e-25 120.2 375 29.6
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 2.6e-25 120.2 375 29.6
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 2.6e-25 120.2 375 29.6
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 8.3e-24 115.2 351 32.5
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 3.2e-23 113.2 352 31.8
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 9.2e-23 111.7 351 29.6
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 1.6e-22 110.9 130 49.2
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 3.5e-22 109.8 106 61.3
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.8e-18 97.4 84 54.8
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.9e-15 87.4 65 64.6
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 6.0e-14 82.4 128 36.7
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 2.3e-13 80.5 126 38.1
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 3.3e-12 76.6 131 38.9
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 1.2e-11 74.7 137 36.5
CAN.G363.39 Capsicum annuum HOM05D005929 ORTHO05D007869 4.7e-11 72.8 103 41.7


User provided reference genes

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