Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 4.8e-100 367.9 189 100.0
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 8.0e-87 323.9 177 92.1
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.4e-86 323.2 177 91.0
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.8e-86 322.8 176 91.5
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 8.8e-86 320.5 177 91.0
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 1.5e-85 319.7 177 89.8
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 3.4e-85 318.5 177 90.4
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 4.4e-85 318.2 177 91.0
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 5.7e-85 317.8 177 90.4
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 1.3e-84 316.6 177 90.4
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.7e-84 316.2 177 89.8
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.7e-84 316.2 178 91.6
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 2.2e-84 315.8 177 89.8
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 2.8e-84 315.5 177 90.4
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 3.7e-84 315.1 177 90.4
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 4.8e-84 314.7 177 91.5
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 4.8e-84 314.7 177 91.5
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 4.8e-84 314.7 177 89.3
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 6.3e-84 314.3 177 87.6
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 1.1e-83 313.5 178 89.3
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 1.8e-83 312.8 179 88.3
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 1.8e-83 312.8 177 89.8
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 2.4e-83 312.4 177 88.1
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 2.4e-83 312.4 177 88.7
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 4.1e-83 311.6 177 88.7
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 1.6e-82 309.7 181 87.3
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 1.6e-82 309.7 177 88.1
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 1.6e-82 309.7 177 88.1
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 1.6e-82 309.7 177 88.7
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 2.0e-82 309.3 177 88.1
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 2.7e-82 308.9 177 89.3
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 3.5e-82 308.5 177 88.7
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 3.5e-82 308.5 181 86.7
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 3.5e-82 308.5 177 88.1
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 4.5e-82 308.1 177 85.9
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 5.9e-82 307.8 179 86.6
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 1.0e-81 307.0 177 86.4
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.7e-81 306.2 177 88.1
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 2.3e-81 305.8 177 86.4
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 2.9e-81 305.4 177 85.9
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 3.8e-81 305.1 177 86.4
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 3.8e-81 305.1 177 85.3
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 6.6e-81 304.3 177 87.6
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 8.6e-81 303.9 177 85.9
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 8.6e-81 303.9 185 83.8
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 8.6e-81 303.9 177 86.4
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 8.6e-81 303.9 177 86.4
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 8.6e-81 303.9 177 87.6
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.1e-80 303.5 178 87.6
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 1.1e-80 303.5 177 87.0
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 1.1e-80 303.5 177 84.7
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 2.5e-80 302.4 177 84.7
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 2.5e-80 302.4 177 85.3
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 2.5e-80 302.4 177 85.3
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 4.2e-80 301.6 177 85.3
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 5.5e-80 301.2 177 85.3
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 7.2e-80 300.8 177 86.4
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 7.2e-80 300.8 177 85.3
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 7.2e-80 300.8 177 86.4
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 9.5e-80 300.4 177 86.4
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 1.2e-79 300.1 177 85.9
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 1.6e-79 299.7 177 84.7
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 2.1e-79 299.3 177 85.9
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 8.0e-79 297.4 177 84.7
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 8.0e-79 297.4 177 84.7
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 1.4e-78 296.6 177 84.7
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 1.8e-78 296.2 177 85.9
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 2.3e-78 295.8 177 82.5
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 3.0e-78 295.4 177 83.6
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 3.0e-78 295.4 177 81.9
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 3.0e-78 295.4 177 85.3
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 4.0e-78 295.0 177 82.5
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 6.8e-78 294.3 164 90.9
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 8.9e-78 293.9 177 85.3
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 8.9e-78 293.9 208 74.5
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 2.6e-77 292.4 177 80.8
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 2.6e-77 292.4 178 80.9
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 5.7e-77 291.2 177 82.5
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 5.7e-77 291.2 206 73.8
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 5.7e-77 291.2 177 81.9
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 9.8e-77 290.4 177 85.3
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 1.3e-76 290.0 177 80.8
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 1.7e-76 289.7 208 74.0
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 2.2e-76 289.3 177 81.4
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 2.2e-76 289.3 177 80.2
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 2.8e-76 288.9 177 80.8
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 2.8e-76 288.9 177 81.9
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 2.8e-76 288.9 178 81.5
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 3.7e-76 288.5 178 81.5
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 1.1e-75 287.0 179 81.0
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 5.4e-75 284.6 178 80.9
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 5.4e-75 284.6 177 82.5
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 1.0e-73 280.4 188 77.1
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 1.7e-73 279.6 179 76.5
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.5e-72 276.6 181 78.5
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 6.8e-70 267.7 181 74.6
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.7e-68 263.1 182 76.4
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 2.2e-68 262.7 181 74.0
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 2.4e-67 259.2 177 72.3
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 5.4e-67 258.1 145 89.0
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 7.0e-67 257.7 179 71.5
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 1.6e-66 256.5 177 74.6
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 1.0e-65 253.8 177 73.4
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 2.5e-64 249.2 146 86.3
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 3.3e-64 248.8 146 87.0
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 4.6e-58 228.4 177 69.5
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 3.9e-57 225.3 200 62.0
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 3.6e-55 218.8 177 64.4
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 6.0e-50 201.4 199 60.3
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 3.0e-49 199.1 115 84.3
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 4.0e-46 188.7 180 55.6
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 3.2e-43 179.1 181 53.6
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 5.1e-41 171.8 177 56.5
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 3.4e-37 159.1 96 87.5
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 5.8e-37 158.3 91 83.5
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 9.9e-37 157.5 186 47.3
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 2.2e-36 156.4 96 79.2
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 2.9e-28 129.4 83 77.1
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 4.2e-19 99.0 63 73.0
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 7.4e-16 88.2 48 83.3
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 7.1e-11 71.6 34 91.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 1.2e-10 70.9 49 69.4
Actinidia11341 Actinidia chinensis HOM05D006457 ORTHO05D056652 6.9e-06 55.1 39 71.8


User provided reference genes

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