Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 8.0e-38 160.2 99 100.0
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 9.8e-36 153.3 99 90.9
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 2.9e-27 125.2 99 68.7
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 2.9e-27 125.2 99 70.7
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.6e-25 119.4 99 67.7
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.7e-25 118.6 99 67.7
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.3e-24 116.3 99 66.7
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.5e-23 112.1 98 61.2
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 7.3e-23 110.5 99 63.6
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 2.0e-17 92.4 101 54.5
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 6.6e-16 87.4 101 49.5
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.5e-15 86.3 104 52.9
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 9.5e-15 83.6 105 54.3
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 9.5e-15 83.6 105 54.3
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 9.5e-15 83.6 103 49.5
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 2.1e-14 82.4 104 49.0
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 8.1e-14 80.5 99 47.5
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 1.4e-13 79.7 101 52.5
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 1.8e-13 79.3 105 51.4
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 1.8e-13 79.3 98 51.0
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 4.0e-13 78.2 101 49.5
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 4.0e-13 78.2 101 49.5
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 4.0e-13 78.2 101 49.5
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 4.0e-13 78.2 101 49.5
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 4.0e-13 78.2 101 49.5
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 4.0e-13 78.2 101 49.5
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 4.0e-13 78.2 101 49.5
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 4.0e-13 78.2 101 49.5
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 8.9e-13 77.0 125 44.0
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 1.5e-12 76.3 99 49.5
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 2.0e-12 75.9 96 51.0
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 2.6e-12 75.5 65 64.6
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 3.4e-12 75.1 72 52.8
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 3.4e-12 75.1 125 43.2
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 5.8e-12 74.3 105 47.6
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 9.9e-12 73.6 101 49.5
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 1.3e-11 73.2 102 48.0
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 1.3e-11 73.2 99 50.5
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 1.7e-11 72.8 102 48.0
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 1.7e-11 72.8 102 48.0
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 2.2e-11 72.4 92 50.0
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 2.9e-11 72.0 99 49.5
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 3.7e-11 71.6 74 54.1
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 4.9e-11 71.2 103 45.6
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 6.4e-11 70.9 106 45.3
C04p42360 Brassica napus HOM05D005842 ORTHO05D007077 8.3e-11 70.5 93 50.5
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-10 70.1 125 41.6
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-10 70.1 125 41.6
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-10 70.1 125 41.6
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 1.1e-10 70.1 105 50.5
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 1.9e-10 69.3 103 44.7
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 2.4e-10 68.9 99 46.5
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 2.4e-10 68.9 105 49.5
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 3.2e-10 68.6 103 44.7
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 4.1e-10 68.2 126 42.1
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 4.1e-10 68.2 126 42.1
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 7.1e-10 67.4 70 52.9
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 7.1e-10 67.4 70 52.9
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 7.1e-10 67.4 99 44.4
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 7.1e-10 67.4 104 48.1
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 9.2e-10 67.0 97 50.5
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 1.6e-09 66.2 46 78.3
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 3.5e-09 65.1 103 45.6
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 4.6e-09 64.7 94 42.6
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 6.0e-09 64.3 99 41.4
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 6.0e-09 64.3 99 41.4
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 7.8e-09 63.9 69 52.2
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 7.8e-09 63.9 99 41.4
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 1.0e-08 63.5 60 56.7
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 1.0e-08 63.5 44 77.3
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 1.7e-08 62.8 39 74.4
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 3.0e-08 62.0 44 75.0
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.0e-08 62.0 93 40.9
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 5.1e-08 61.2 136 36.0
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 5.1e-08 61.2 44 75.0
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 6.6e-08 60.8 67 52.2
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 6.6e-08 60.8 95 40.0
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 6.6e-08 60.8 103 43.7
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 6.6e-08 60.8 101 41.6
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 8.6e-08 60.5 93 40.9
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 1.1e-07 60.1 45 75.6
C08p07940 Brassica napus HOM05D005842 ORTHO05D007077 1.1e-07 60.1 45 75.6
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 1.1e-07 60.1 45 75.6
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 1.1e-07 60.1 45 75.6
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 1.5e-07 59.7 67 50.7
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 1.5e-07 59.7 99 44.4
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 1.9e-07 59.3 125 38.4
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 1.9e-07 59.3 123 37.4
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 1.9e-07 59.3 61 57.4
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 2.5e-07 58.9 38 71.1
Medtr1g045950 Medicago truncatula HOM05D005842 ORTHO05D007077 3.3e-07 58.5 37 73.0
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 3.3e-07 58.5 96 41.7
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 5.6e-07 57.8 96 40.6
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 7.3e-07 57.4 125 38.4
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 9.5e-07 57.0 42 64.3
Lalb_Chr03g0036861 Lupinus albus HOM05D005842 ORTHO05D007077 9.5e-07 57.0 61 52.5
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 9.5e-07 57.0 96 40.6
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 9.5e-07 57.0 96 40.6
Carub.0007s2898 Capsella rubella HOM05D005842 ORTHO05D007077 1.2e-06 56.6 41 73.2
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 1.6e-06 56.2 97 45.4
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 2.1e-06 55.8 42 61.9
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 2.1e-06 55.8 96 39.6
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 2.1e-06 55.8 33 78.8
AT4G13560 Arabidopsis thaliana HOM05D005842 ORTHO05D007077 3.6e-06 55.1 125 36.8
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 4.7e-06 54.7 97 42.3
Duzib151G0923 Durio zibethinus HOM05D005842 ORTHO05D007077 4.7e-06 54.7 36 77.8
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 4.7e-06 54.7 99 42.4
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 4.7e-06 54.7 99 42.4
TPR.G23959 Trifolium pratense HOM05D005842 ORTHO05D007077 4.7e-06 54.7 64 51.6
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 6.2e-06 54.3 38 65.8
TWI53G0373 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 6.2e-06 54.3 33 75.8
Cpa.g.sc336.6 Carica papaya HOM05D008630 ORTHO05D010727 8.1e-06 53.9 64 48.4


User provided reference genes

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