Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 0.0e+00 1174.1 657 100.0
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 1.9e-273 945.7 651 81.6
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 6.6e-213 744.6 660 68.5
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 3.7e-208 728.8 666 66.1
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 1.1e-207 727.2 645 67.0
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.2e-206 723.8 655 66.0
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 1.7e-192 676.8 671 61.5
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 2.3e-181 639.8 646 61.8
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 1.7e-176 623.6 616 61.5
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 1.1e-175 620.9 673 60.6
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 3.2e-175 619.4 664 61.9
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 7.1e-167 591.7 681 58.4
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 6.0e-166 588.6 468 73.7
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 1.3e-163 580.9 646 60.5
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 2.9e-160 569.7 640 55.6
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 1.9e-159 567.0 630 57.0
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 2.5e-159 566.6 632 57.4
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 3.3e-156 556.2 664 57.5
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 3.1e-154 549.7 667 57.4
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 1.4e-151 540.8 637 57.5
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 7.9e-150 535.0 662 53.5
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.4e-149 534.3 621 55.6
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.4e-149 534.3 621 55.6
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 1.5e-148 530.8 675 54.2
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 1.7e-147 527.3 650 54.6
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.2e-145 521.2 651 53.5
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 4.5e-145 519.2 633 54.7
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 7.7e-145 518.5 645 51.9
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.3e-144 517.7 670 52.2
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.1e-143 514.6 657 53.0
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 1.1e-143 514.6 608 58.7
Lj3A630T50 Lonicera japonica HOM05D003628 ORTHO05D004253 4.2e-143 512.7 569 61.7
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 1.6e-142 510.8 643 50.2
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 6.7e-141 505.4 658 51.5
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 1.1e-140 504.6 731 48.8
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 1.1e-140 504.6 667 54.1
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 5.7e-140 502.3 657 51.8
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 7.4e-140 501.9 621 54.9
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 3.1e-138 496.5 659 50.8
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 1.6e-137 494.2 667 51.0
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 3.5e-137 493.0 661 52.6
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 4.5e-137 492.7 642 51.1
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 5.9e-137 492.3 621 56.5
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 7.7e-137 491.9 661 55.7
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 1.2e-134 484.6 644 50.5
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.1e-134 483.8 621 56.0
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 1.0e-133 481.5 657 54.3
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 1.0e-133 481.5 682 49.0
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 2.3e-133 480.3 654 49.5
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 8.8e-133 478.4 662 49.8
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 1.2e-132 478.0 671 52.9
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 1.2e-132 478.0 662 50.0
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 3.1e-130 469.9 441 68.5
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 5.9e-129 465.7 596 53.2
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 1.0e-128 464.9 629 53.6
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 2.2e-128 463.8 640 48.4
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 2.2e-128 463.8 648 49.1
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.8e-128 463.0 608 54.1
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 6.5e-128 462.2 620 53.4
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 6.5e-128 462.2 681 51.0
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 8.5e-128 461.8 661 52.0
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 1.2e-126 458.0 647 52.6
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 1.4e-125 454.5 641 48.0
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 5.7e-124 449.1 669 48.7
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 1.7e-123 447.6 660 47.9
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 1.1e-122 444.9 651 48.8
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 1.8e-122 444.1 651 47.3
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 3.1e-122 443.4 634 49.4
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 5.4e-122 442.6 656 51.2
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 5.4e-122 442.6 680 49.3
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 1.2e-121 441.4 666 50.2
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 2.0e-121 440.7 671 49.9
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 3.5e-121 439.9 637 48.4
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 4.5e-121 439.5 644 48.8
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 1.3e-120 438.0 641 48.8
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 2.9e-120 436.8 669 47.4
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 3.6e-118 429.9 639 51.5
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 1.4e-117 427.9 662 48.9
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 2.3e-117 427.2 646 46.4
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 6.8e-117 425.6 653 52.2
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 6.8e-117 425.6 650 49.7
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 7.5e-116 422.2 683 47.7
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 9.8e-116 421.8 651 50.7
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 6.3e-115 419.1 657 50.7
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 8.3e-115 418.7 669 49.6
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 3.1e-114 416.8 619 50.1
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 2.3e-112 410.6 627 48.5
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 3.3e-111 406.8 675 48.0
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 9.5e-111 405.2 682 46.9
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 4.7e-110 402.9 628 46.7
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 8.0e-110 402.1 630 50.6
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 3.4e-108 396.7 601 47.9
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 6.4e-107 392.5 852 38.8
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 5.4e-106 389.4 620 48.7
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 3.9e-104 383.3 621 48.1
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 2.5e-103 380.6 380 61.3
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 9.5e-103 378.6 608 47.2
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 9.5e-103 378.6 524 51.5
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 1.8e-101 374.4 662 47.0
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 3.4e-100 370.2 584 45.0
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 7.5e-100 369.0 536 49.1
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 9.8e-100 368.6 645 45.7
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 1.2e-97 361.7 375 62.4
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 2.7e-97 360.5 635 45.7
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 2.3e-96 357.5 644 47.0
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 3.9e-96 356.7 649 45.0
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 2.5e-95 354.0 633 46.4
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 1.6e-94 351.3 625 45.0
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 1.4e-93 348.2 615 46.2
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 1.2e-92 345.1 637 44.7
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 4.4e-92 343.2 647 43.3
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 1.7e-91 341.3 571 46.6
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 1.9e-90 337.8 643 43.9
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 7.1e-90 335.9 599 46.6
Cpa.g.sc59.57 Carica papaya HOM05D003628 ORTHO05D004253 9.2e-90 335.5 497 49.5
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 3.9e-88 330.1 659 43.2
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 3.9e-88 330.1 575 48.9
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 2.5e-87 327.4 648 44.0
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 7.3e-87 325.9 613 45.7
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 2.8e-86 323.9 637 43.8
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 1.1e-85 322.0 639 44.1
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 1.4e-85 321.6 303 62.7
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 2.0e-84 317.8 632 43.7
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 2.0e-84 317.8 587 45.3
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 7.1e-82 309.3 658 42.7
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 7.8e-81 305.8 620 43.4
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 7.8e-81 305.8 641 42.9
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 5.1e-80 303.1 576 43.8
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 6.6e-80 302.8 621 43.2
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 4.3e-79 300.1 636 38.8
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 4.7e-78 296.6 630 42.5
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 2.6e-76 290.8 589 43.3
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 1.9e-74 284.6 589 42.6
Lj6A641G44 Lonicera japonica HOM05D003628 ORTHO05D004253 2.0e-60 238.0 421 46.1
Nitab4.5_0003287g0020 Nicotiana tabacum HOM05D003628 ORTHO05D004253 9.3e-58 229.2 459 43.4
Hund12227 Selenicereus undatus HOM05D003628 ORTHO05D004253 8.7e-56 222.6 384 45.3
CDE04G0520 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 1.4e-53 215.3 377 47.5
Actinidia11386 Actinidia chinensis HOM05D003628 ORTHO05D004253 1.1e-50 205.7 426 40.8
Oeu012942.2 Olea europaea HOM05D003628 ORTHO05D004253 3.5e-49 200.7 164 68.9
Hma1.2p1_0112F.1_g055040 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.1e-45 187.6 184 64.7
Pp3c20_15710 Physcomitrium patens HOM05D003628 ORTHO05D004253 3.4e-44 184.1 424 35.8
Hma1.2p1_0112F.1_g055050 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 4.2e-42 177.2 306 43.5
Oeu023151.1 Olea europaea HOM05D003628 ORTHO05D004253 2.7e-41 174.5 113 81.4
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 3.6e-41 174.1 436 35.6
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 1.0e-40 172.6 544 32.2
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 3.9e-40 170.6 419 34.8
SEGI_10173 Sequoiadendron giganteum HOM05D003628 ORTHO05D004253 1.1e-39 169.1 390 43.3
Cpa.g.sc59.56 Carica papaya HOM05D003628 ORTHO05D004253 2.9e-35 154.5 134 67.9
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 3.6e-33 147.5 542 30.1
MD13G1227500 Malus domestica HOM05D003628 ORTHO05D004253 3.0e-32 144.4 100 80.0
Actinidia11385 Actinidia chinensis HOM05D003628 ORTHO05D004253 2.6e-31 141.4 91 81.3
SMO116G0337 Selaginella moellendorffii HOM05D003628 ORTHO05D004253 6.3e-30 136.7 427 34.7
Pp3c23_8100 Physcomitrium patens HOM05D003628 ORTHO05D004253 6.1e-25 120.2 405 31.6
Gohir.D09G057732 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.6e-20 105.5 68 86.8
Glyma.10G128300 Glycine max HOM05D003628 ORTHO05D004253 1.7e-19 102.1 291 33.3
Oeu023150.1 Olea europaea HOM05D003628 ORTHO05D004253 2.9e-19 101.3 55 85.5
Gohir.D04G116566 Gossypium hirsutum HOM05D003628 ORTHO05D004253 6.5e-19 100.1 66 83.3
Hund12233 Selenicereus undatus HOM05D003628 ORTHO05D004253 7.2e-18 96.7 76 69.7
PGSC0003DMG402011586 Solanum tuberosum HOM05D003628 ORTHO05D004253 6.1e-17 93.6 62 77.4
Gorai.007G071000 Gossypium raimondii HOM05D003628 ORTHO05D004253 5.7e-15 87.0 62 75.8
Gohir.D03G086101 Gossypium hirsutum HOM05D003628 ORTHO05D004253 7.5e-15 86.7 69 69.6
Gorai.007G244100 Gossypium raimondii HOM05D003628 ORTHO05D004253 7.5e-15 86.7 61 77.0
Gorai.003G076100 Gossypium raimondii HOM05D005297 ORTHO05D006545 1.7e-14 85.5 69 69.6
Gohir.D08G165950 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.8e-13 82.0 50 88.0
Gohir.D11G226200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.1e-13 81.3 56 78.6
Gorai.013G043600 Gossypium raimondii HOM05D003628 ORTHO05D004253 5.3e-13 80.5 50 86.0
Gohir.D06G132966 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.9e-12 77.0 53 75.5
Gorai.010G154900 Gossypium raimondii HOM05D003628 ORTHO05D004253 7.7e-12 76.6 53 75.5
Gohir.D08G229150 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.0e-11 76.3 53 75.5
Gohir.D02G158575 Gossypium hirsutum HOM05D003628 ORTHO05D004253 8.5e-11 73.2 53 71.7
SHI00869 Sapria himalayana HOM05D003628 ORTHO05D004253 1.1e-10 72.8 76 56.6
AagrBONN_evm.TU.Sc2ySwM_344.5018 Anthoceros agrestis HOM05D003628 ORTHO05D004253 7.2e-10 70.1 162 32.1
Ah.14g082010 Amaranthus hybridus HOM05D003628 ORTHO05D004253 3.6e-09 67.8 57 64.9
AL2G14740 Arabidopsis lyrata HOM05D000013 ORTHO05D000011 3.6e-09 67.8 47 74.5
Gohir.D11G243366 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.4e-08 65.9 61 65.6
Gohir.D01G060866 Gossypium hirsutum HOM05D003628 ORTHO05D004253 6.8e-08 63.5 39 82.1
Gohir.A11G239380 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.0e-07 62.0 39 79.5
Gorai.009G342200 Gossypium raimondii HOM05D003628 ORTHO05D016264 3.4e-07 61.2 37 83.8
Cre12.g514550 Chlamydomonas reinhardtii HOM05D003628 ORTHO05D004253 5.7e-07 60.5 95 38.9
Gohir.D08G175500 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.7e-07 60.5 39 76.9
Gohir.D06G084232 Gossypium hirsutum HOM05D003628 ORTHO05D016264 9.8e-07 59.7 37 81.1
Gohir.D01G077750 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.7e-06 58.9 39 76.9
Gorai.003G055900 Gossypium raimondii HOM05D005297 ORTHO05D006545 3.7e-06 57.8 62 54.8


User provided reference genes

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