Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 2.3e-56 221.9 101 100.0
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 2.7e-41 171.8 93 79.6
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 1.8e-40 169.1 86 84.9
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 3.0e-40 168.3 86 83.7
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 3.0e-40 168.3 86 83.7
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 3.0e-40 168.3 86 83.7
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 3.0e-40 168.3 86 82.6
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 6.7e-40 167.2 86 80.2
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.5e-39 166.0 86 81.4
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.9e-39 165.6 86 81.4
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 4.3e-39 164.5 86 81.4
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 9.6e-39 163.3 86 77.9
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.3e-38 162.9 86 82.6
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 2.8e-38 161.8 86 81.4
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 3.7e-38 161.4 86 80.2
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 3.7e-38 161.4 100 72.0
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 6.3e-38 160.6 87 80.5
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 6.3e-38 160.6 86 79.1
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 6.3e-38 160.6 86 79.1
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 6.3e-38 160.6 87 78.2
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 8.2e-38 160.2 86 81.4
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 2.4e-37 158.7 86 79.1
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 4.1e-37 157.9 84 81.0
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 4.1e-37 157.9 86 79.1
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 4.1e-37 157.9 88 72.7
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 6.9e-37 157.1 86 79.1
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 9.0e-37 156.8 84 75.0
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 9.0e-37 156.8 84 76.2
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.5e-36 156.0 84 81.0
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 1.5e-36 156.0 84 76.2
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.0e-36 155.6 86 79.1
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 2.6e-36 155.2 86 77.9
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 4.5e-36 154.5 86 76.7
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.0e-35 153.3 86 77.9
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 1.3e-35 152.9 86 75.6
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 3.8e-35 151.4 84 77.4
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 3.2e-34 148.3 84 73.8
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 4.2e-34 147.9 85 74.1
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.2e-33 146.4 84 72.6
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.2e-33 146.4 84 72.6
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.2e-33 146.4 87 73.6
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 1.6e-33 146.0 84 77.4
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 3.5e-33 144.8 86 69.8
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 6.1e-33 144.1 86 68.6
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 6.1e-33 144.1 86 72.1
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 6.1e-33 144.1 86 72.1
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 7.9e-33 143.7 86 69.8
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.0e-32 143.3 86 70.9
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 8.7e-32 140.2 84 69.0
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 1.1e-31 139.8 86 68.6
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 1.1e-31 139.8 86 66.3
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.1e-31 139.8 86 67.4
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 2.5e-31 138.7 86 67.4
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 3.3e-31 138.3 84 69.0
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 5.7e-31 137.5 79 72.2
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 7.4e-31 137.1 83 68.7
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 7.4e-31 137.1 86 67.4
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 9.7e-31 136.7 86 62.8
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 9.7e-31 136.7 86 65.1
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.3e-30 136.3 86 67.4
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.6e-30 136.0 83 67.5
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 2.8e-30 135.2 84 65.5
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 5.9e-28 127.5 84 63.1
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 1.0e-24 116.7 73 65.8
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 6.7e-24 114.0 84 56.0
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 6.9e-21 104.0 89 53.9
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.5e-20 102.8 89 55.1
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 7.2e-18 94.0 86 46.5
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.7e-14 81.6 77 48.1
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 4.1e-13 78.2 80 47.5
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 8.5e-11 70.5 39 66.7
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 9.4e-10 67.0 73 42.5
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 9.4e-10 67.0 76 39.5
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 9.4e-10 67.0 73 45.2
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 1.2e-09 66.6 39 71.8
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.5e-07 59.7 74 37.8


User provided reference genes

Program Settings