Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 2.3e-204 715.3 360 100.0
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 2.0e-33 147.5 74 97.3
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 4.3e-33 146.4 81 90.1
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 7.4e-33 145.6 102 73.5
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 9.7e-33 145.2 81 87.7
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 1.7e-32 144.4 74 93.2
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.7e-32 144.4 74 93.2
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 1.7e-32 144.4 74 93.2
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 1.7e-32 144.4 74 93.2
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 2.8e-32 143.7 74 93.2
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 4.8e-32 142.9 74 91.9
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 6.3e-32 142.5 81 85.2
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 6.3e-32 142.5 73 93.2
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 1.1e-31 141.7 81 85.2
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 1.4e-31 141.4 74 93.2
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 1.8e-31 141.0 87 81.6
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 9.1e-31 138.7 87 79.3
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 9.1e-31 138.7 74 89.2
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 9.1e-31 138.7 74 89.2
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 1.2e-30 138.3 87 77.0
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 1.5e-30 137.9 87 77.0
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 1.5e-30 137.9 87 77.0
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 1.5e-30 137.9 87 77.0
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 1.5e-30 137.9 87 75.9
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 1.5e-30 137.9 88 75.0
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 1.5e-30 137.9 87 75.9
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 2.0e-30 137.5 87 74.7
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 2.6e-30 137.1 87 75.9
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 3.4e-30 136.7 87 75.9
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 3.4e-30 136.7 87 75.9
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 3.4e-30 136.7 87 75.9
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 3.4e-30 136.7 87 74.7
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 3.4e-30 136.7 87 74.7
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 4.5e-30 136.3 87 77.0
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 4.5e-30 136.3 94 72.3
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 4.5e-30 136.3 87 74.7
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 4.5e-30 136.3 94 71.3
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 4.5e-30 136.3 74 90.5
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 5.9e-30 136.0 87 75.9
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 5.9e-30 136.0 74 87.8
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 7.7e-30 135.6 74 89.2
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 7.7e-30 135.6 74 86.5
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 7.7e-30 135.6 87 75.9
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 1.7e-29 134.4 87 74.7
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 2.2e-29 134.0 74 85.1
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 2.9e-29 133.7 87 73.6
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 2.9e-29 133.7 74 87.8
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 2.9e-29 133.7 86 76.7
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 3.8e-29 133.3 72 87.5
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 5.0e-29 132.9 94 70.2
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 6.5e-29 132.5 87 75.9
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 8.5e-29 132.1 74 82.4
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 1.1e-28 131.7 74 82.4
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 1.1e-28 131.7 74 83.8
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 1.1e-28 131.7 87 77.0
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 1.4e-28 131.3 87 73.6
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 1.4e-28 131.3 81 79.0
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 1.9e-28 131.0 87 74.7
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 1.9e-28 131.0 74 85.1
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 1.9e-28 131.0 74 83.8
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 2.5e-28 130.6 74 83.8
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 2.5e-28 130.6 86 75.6
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 3.2e-28 130.2 74 81.1
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 3.2e-28 130.2 73 86.3
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 4.2e-28 129.8 74 81.1
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 4.2e-28 129.8 74 81.1
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 4.2e-28 129.8 74 81.1
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 4.2e-28 129.8 74 81.1
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 7.2e-28 129.0 87 73.6
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 9.4e-28 128.6 74 81.1
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 9.4e-28 128.6 74 81.1
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 9.4e-28 128.6 74 81.1
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 9.4e-28 128.6 74 81.1
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 9.4e-28 128.6 74 81.1
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 9.4e-28 128.6 74 85.1
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 9.4e-28 128.6 74 83.8
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 9.4e-28 128.6 74 79.7
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 1.2e-27 128.3 81 77.8
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 1.2e-27 128.3 81 77.8
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 1.2e-27 128.3 73 84.9
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 2.7e-27 127.1 73 83.6
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 2.7e-27 127.1 73 83.6
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 2.7e-27 127.1 73 83.6
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 2.7e-27 127.1 73 83.6
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 2.7e-27 127.1 73 83.6
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 2.7e-27 127.1 73 83.6
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 2.7e-27 127.1 73 83.6
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 2.7e-27 127.1 73 83.6
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 3.6e-27 126.7 94 68.1
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 3.6e-27 126.7 87 70.1
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 3.6e-27 126.7 87 71.3
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 4.7e-27 126.3 87 70.1
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 7.9e-27 125.6 74 82.4
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 3.0e-26 123.6 74 77.0
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 1.1e-25 121.7 63 88.9
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 2.0e-25 120.9 73 80.8
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 1.3e-24 118.2 89 65.2
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 1.3e-24 118.2 74 75.7
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 2.2e-24 117.5 95 63.2
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 3.7e-24 116.7 73 75.3
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 3.7e-24 116.7 66 83.3
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 1.1e-23 115.2 71 76.1
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 1.1e-23 115.2 71 76.1
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 1.1e-23 115.2 64 85.9
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 2.4e-23 114.0 59 91.5
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 3.1e-23 113.6 97 62.9
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 1.6e-22 111.3 87 64.4
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 2.6e-22 110.5 85 63.5
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 2.6e-22 110.5 73 74.0
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 5.9e-22 109.4 87 63.2
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 2.2e-21 107.5 85 62.4
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 5.0e-21 106.3 66 75.8
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 2.1e-19 100.9 87 58.6
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 2.1e-19 100.9 74 63.5
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 2.3e-18 97.4 71 63.4
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 2.3e-18 97.4 57 84.2
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 3.0e-18 97.1 71 62.0
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 7.5e-17 92.4 61 67.2
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 9.7e-17 92.0 52 84.6
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 1.7e-16 91.3 61 70.5
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 4.8e-16 89.7 71 60.6
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 2.4e-15 87.4 109 46.8
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 3.1e-15 87.0 91 48.4
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 2.0e-14 84.3 57 71.9
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.7e-13 81.3 61 60.7
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 7.2e-12 75.9 76 53.9
RcHm_v2.0_Chr7g0240721 Rosa chinensis HOM05D005610 ORTHO05D006181 2.3e-10 70.9 44 75.0
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 3.0e-10 70.5 61 54.1
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 2.8e-08 63.9 85 38.8
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 8.3e-08 62.4 60 51.7
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 1.1e-07 62.0 36 86.1
Migut.M01383 Erythranthe guttata HOM05D005610 ORTHO05D006181 3.1e-07 60.5 54 51.9
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 5.4e-07 59.7 51 56.9
CARHR125830 Cardamine hirsuta HOM05D005610 ORTHO05D006181 7.7e-06 55.8 38 63.2


User provided reference genes

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