Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 1.5e-60 236.5 164 100.0
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 2.6e-41 172.6 157 65.6
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 2.5e-28 129.4 166 56.0
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 4.7e-27 125.2 170 52.4
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 1.8e-26 123.2 159 58.5
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 6.4e-24 114.8 158 71.5
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 1.4e-23 113.6 158 70.9
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 1.4e-23 113.6 157 55.4
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 1.9e-23 113.2 161 68.9
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 2.4e-23 112.8 158 50.6
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 2.3e-21 106.3 161 67.1
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 3.9e-21 105.5 161 52.2
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 8.6e-21 104.4 159 52.8
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.5e-20 103.6 166 57.8
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 1.5e-20 103.6 160 66.2
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 4.3e-20 102.1 161 45.3
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 2.8e-19 99.4 157 50.3
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 6.2e-19 98.2 169 48.5
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 1.4e-18 97.1 157 47.8
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 2.4e-18 96.3 165 49.7
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 3.1e-18 95.9 163 49.7
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 4.0e-18 95.5 168 42.3
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 5.2e-18 95.1 166 43.4
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 3.4e-17 92.4 162 64.2
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 3.4e-17 92.4 162 64.2
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 7.6e-17 91.3 160 61.2
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 7.6e-17 91.3 162 63.6
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 9.9e-17 90.9 166 42.2
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 1.3e-16 90.5 162 61.7
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 2.9e-16 89.4 161 41.6
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 3.8e-16 89.0 164 38.4
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.4e-15 87.0 157 57.3
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 1.4e-15 87.0 161 41.6
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.4e-15 87.0 159 62.9
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.4e-15 86.3 162 63.0
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 4.2e-15 85.5 160 55.6
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 5.4e-15 85.1 168 41.1
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 7.1e-15 84.7 157 48.4
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 2.7e-14 82.8 158 43.0
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 2.7e-14 82.8 159 47.8
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 1.7e-13 80.1 160 41.9
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 3.9e-13 79.0 170 41.2
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 8.7e-13 77.8 150 41.3
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 1.5e-12 77.0 165 42.4
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.5e-12 77.0 157 48.4
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 7.3e-12 74.7 157 38.9
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 7.3e-12 74.7 158 36.7
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 1.6e-11 73.6 159 33.3
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 3.6e-11 72.4 168 43.5
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 1.1e-10 70.9 84 44.0
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 1.4e-10 70.5 157 42.7
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 1.8e-10 70.1 166 45.2
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 2.4e-10 69.7 167 45.5
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 5.2e-10 68.6 166 42.2
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 2.0e-09 66.6 163 38.7
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 2.6e-09 66.2 157 49.7
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 7.6e-09 64.7 155 41.3
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 7.6e-09 64.7 85 49.4
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 3.8e-08 62.4 168 40.5
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 3.8e-08 62.4 159 34.6
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 4.9e-08 62.0 159 38.4
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 1.1e-07 60.8 159 40.3
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 1.4e-07 60.5 160 40.6
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 1.9e-07 60.1 163 38.7
CDE09G0901 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 2.4e-07 59.7 84 41.7
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 2.4e-07 59.7 158 53.8
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 4.2e-07 58.9 106 60.4
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 5.4e-07 58.5 85 47.1
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 9.3e-07 57.8 156 51.3
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 9.3e-07 57.8 159 42.1
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 1.2e-06 57.4 160 36.9
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 1.6e-06 57.0 160 31.2
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 3.5e-06 55.8 106 43.4
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 7.8e-06 54.7 162 30.2


User provided reference genes

Program Settings