Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29684 Davidia involucrata HOM05D002380 ORTHO05D006960 1.3e-199 699.5 345 100.0
Dinv29639 Davidia involucrata HOM05D002380 ORTHO05D006960 3.0e-164 582.0 384 77.9
Hma1.2p1_3305F.1_g335100 Hydrangea macrophylla HOM05D002380 ORTHO05D006960 2.6e-152 542.3 382 71.7
CSS0006349 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D006960 1.6e-149 533.1 384 70.8
vmacro23029 Vaccinium macrocarpon HOM05D002380 ORTHO05D006960 2.1e-146 522.7 384 70.1
Actinidia01643 Actinidia chinensis HOM05D002380 ORTHO05D006960 3.6e-146 521.9 382 69.4
Rhsim11G0117400 Rhododendron simsii HOM05D002380 ORTHO05D006960 1.1e-145 520.4 384 70.3
RcHm_v2.0_Chr7g0218921 Rosa chinensis HOM05D002380 ORTHO05D006960 1.2e-144 516.9 392 68.9
CSS0029934 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D006960 1.7e-143 513.1 384 68.5
FvH4_5g27550 Fragaria vesca HOM05D002380 ORTHO05D006960 5.5e-142 508.1 392 67.9
FAN18G1053 Fragaria x ananassa HOM05D002380 ORTHO05D006960 7.1e-142 507.7 392 67.9
CSS0043519 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D006960 1.6e-141 506.5 384 68.0
GSVIVG01023133001 Vitis vinifera HOM05D002380 ORTHO05D006960 6.0e-141 504.6 390 67.4
FAN13G2214 Fragaria x ananassa HOM05D002380 ORTHO05D006960 2.3e-140 502.7 392 67.1
Lj5A286G23 Lonicera japonica HOM05D002380 ORTHO05D006960 8.7e-140 500.7 381 66.7
Prupe.1G586400 Prunus persica HOM05D002380 ORTHO05D006960 1.5e-139 500.0 393 66.4
QL02p103637 Quercus lobata HOM05D002380 ORTHO05D006960 2.5e-139 499.2 387 67.2
TAR381G0848 Trochodendron aralioides HOM05D002380 ORTHO05D006960 2.1e-138 496.1 390 65.4
CiPaw.05G001100 Carya illinoinensis HOM05D002380 ORTHO05D006960 6.2e-138 494.6 393 66.7
Cc02_g23660 Coffea canephora HOM05D002380 ORTHO05D006960 2.4e-137 492.7 384 64.6
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 2.4e-137 492.7 380 64.7
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 6.9e-137 491.1 380 64.5
Peaxi162Scf00011g02119 Petunia axillaris HOM05D002380 ORTHO05D006960 4.5e-136 488.4 379 64.4
Atru.chr6.195 Acer truncatum HOM05D002380 ORTHO05D006960 2.2e-135 486.1 386 66.3
Cfa004427 Carpinus fangiana HOM05D002380 ORTHO05D006960 6.5e-135 484.6 387 65.4
TWI23G0559 Tripterygium wilfordii HOM05D002380 ORTHO05D006960 1.1e-134 483.8 394 63.7
Manes.07G031400 Manihot esculenta HOM05D002380 ORTHO05D006960 1.2e-133 480.3 386 63.7
vmacro19822 Vaccinium macrocarpon HOM05D002380 ORTHO05D006960 1.2e-133 480.3 381 64.8
Manes.10G105800 Manihot esculenta HOM05D002380 ORTHO05D006960 2.1e-133 479.6 391 62.7
CAN.G855.61 Capsicum annuum HOM05D002380 ORTHO05D006960 2.7e-133 479.2 383 63.4
Thecc.06G020600 Theobroma cacao HOM05D002380 ORTHO05D006960 4.6e-133 478.4 393 62.6
Ca_00015_v3 Cicer arietinum L. HOM05D002380 ORTHO05D006960 7.9e-133 477.6 388 63.7
Sed0014048 Sechium edule HOM05D002380 ORTHO05D006960 1.3e-132 476.9 383 63.2
Sopen01g045350 Solanum pennellii HOM05D002380 ORTHO05D006960 1.8e-132 476.5 383 62.9
MSTRG.27885 Avicennia marina HOM05D002380 ORTHO05D006960 2.3e-132 476.1 383 63.2
DCAR_001729 Daucus carota HOM05D002380 ORTHO05D006960 3.0e-132 475.7 384 63.8
Duzib192G0099 Durio zibethinus HOM05D002380 ORTHO05D006960 3.0e-132 475.7 393 63.1
Solyc01g102940.3 Solanum lycopersicum HOM05D002380 ORTHO05D006960 3.0e-132 475.7 383 62.7
Lalb_Chr18g0061151 Lupinus albus HOM05D002380 ORTHO05D006960 6.7e-132 474.6 383 63.7
MD08G1249200 Malus domestica HOM05D002380 ORTHO05D006960 6.7e-132 474.6 384 63.8
PGSC0003DMG400020720 Solanum tuberosum HOM05D002380 ORTHO05D006960 6.7e-132 474.6 383 62.9
MD15G1443800 Malus domestica HOM05D002380 ORTHO05D006960 1.1e-131 473.8 380 64.7
Migut.B00709 Erythranthe guttata HOM05D002380 ORTHO05D006960 1.5e-131 473.4 384 61.7
Oeu016644.1 Olea europaea HOM05D002380 ORTHO05D006960 2.5e-131 472.6 384 61.5
Actinidia00145 Actinidia chinensis HOM05D002380 ORTHO05D006960 1.3e-130 470.3 384 65.1
Sabra01G0175000 Salix brachista HOM05D002380 ORTHO05D006960 1.3e-130 470.3 390 62.6
TPR.G5956 Trifolium pratense HOM05D002380 ORTHO05D006960 1.3e-130 470.3 388 63.4
Ciclev10000109m.g Citrus clementina HOM05D002380 ORTHO05D006960 1.6e-130 469.9 373 65.4
Glyma.16G000200 Glycine max HOM05D002380 ORTHO05D006960 2.1e-130 469.5 388 62.6
Gorai.010G143100 Gossypium raimondii HOM05D002380 ORTHO05D006960 2.8e-130 469.2 392 61.0
ClCG10G007520 Citrullus lanatus HOM05D002380 ORTHO05D006960 6.3e-130 468.0 383 62.7
CANSAT01G1628 Cannabis sativa HOM05D002380 ORTHO05D006960 8.2e-130 467.6 392 62.2
Glyma.12G163700 Glycine max HOM05D002380 ORTHO05D006960 8.2e-130 467.6 388 62.4
Oeu043598.1 Olea europaea HOM05D002380 ORTHO05D006960 1.4e-129 466.8 384 60.7
Gohir.D06G122900 Gossypium hirsutum HOM05D002380 ORTHO05D006960 1.8e-129 466.5 392 60.7
Potri.004G229800 Populus trichocarpa HOM05D002380 ORTHO05D006960 2.4e-129 466.1 390 61.8
Medtr2g005110 Medicago truncatula HOM05D002380 ORTHO05D006960 6.9e-129 464.5 388 62.6
Phvul.006G221800 Phaseolus vulgaris HOM05D002380 ORTHO05D006960 6.9e-129 464.5 389 61.4
Sed0016889 Sechium edule HOM05D002380 ORTHO05D006960 6.9e-129 464.5 380 62.6
Gohir.D05G109900 Gossypium hirsutum HOM05D002380 ORTHO05D006960 9.0e-129 464.2 392 61.7
MELO3C016448.2 Cucumis melo HOM05D002380 ORTHO05D006960 2.0e-128 463.0 383 61.1
VMungo0540G1526 Vigna mungo HOM05D002380 ORTHO05D006960 3.4e-128 462.2 388 61.6
ECA236G1140 Erigeron canadensis HOM05D002380 ORTHO05D006960 7.6e-128 461.1 381 60.6
Gorai.009G114000 Gossypium raimondii HOM05D002380 ORTHO05D006960 7.6e-128 461.1 389 61.7
Lj2g0027017 Lotus japonicus HOM05D002380 ORTHO05D006960 7.6e-128 461.1 388 63.4
CsaV3_3G006730 Cucumis sativus L. HOM05D002380 ORTHO05D006960 1.0e-127 460.7 383 60.1
Gohir.A06G115700 Gossypium hirsutum HOM05D002380 ORTHO05D006960 3.8e-127 458.8 392 60.5
Eucgr.G00060 Eucalyptus grandis HOM05D002380 ORTHO05D006960 6.5e-127 458.0 393 61.1
Psat1g223680 Pisum sativum HOM05D002380 ORTHO05D006960 6.5e-127 458.0 384 62.5
Cpa.g.sc173.3 Carica papaya HOM05D002380 ORTHO05D006960 8.5e-127 457.6 384 63.0
HanXRQChr15g0469711 Helianthus annuus HOM05D002380 ORTHO05D006960 1.9e-126 456.4 384 60.7
Lsat_1_v5_gn_9_83520 Lactuca sativa HOM05D002380 ORTHO05D006960 2.5e-126 456.1 381 60.9
SalBow4G1427 Salvia bowleyana HOM05D002380 ORTHO05D006960 1.6e-125 453.4 381 60.4
AUR62042248 Chenopodium quinoa HOM05D002380 ORTHO05D006960 2.1e-125 453.0 382 60.7
Haze_09967 Corylus avellana HOM05D002380 ORTHO05D006960 2.7e-125 452.6 388 62.6
EL10Ac6g13966 Beta vulgaris HOM05D002380 ORTHO05D006960 6.1e-125 451.4 378 60.3
MBI03_g21084_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D006960 6.1e-125 451.4 384 60.4
PSO210G3401 Papaver somniferum HOM05D002380 ORTHO05D006960 1.3e-124 450.3 390 59.5
Aqoxy6G00017 Aquilegia oxysepala HOM05D002380 ORTHO05D006960 1.8e-124 449.9 392 60.2
HanXRQChr04g0109261 Helianthus annuus HOM05D002380 ORTHO05D006960 4.3e-123 445.3 380 59.7
PSO447G0289 Papaver somniferum HOM05D002380 ORTHO05D006960 4.3e-123 445.3 390 59.2
Hund15344 Selenicereus undatus HOM05D002380 ORTHO05D006960 4.3e-123 445.3 380 59.7
Migut.N00867 Erythranthe guttata HOM05D002380 ORTHO05D006960 9.7e-123 444.1 378 60.6
PSO528G0147 Papaver somniferum HOM05D002380 ORTHO05D006960 1.3e-122 443.7 390 59.5
Ah.02g128480 Amaranthus hybridus HOM05D002380 ORTHO05D006960 1.6e-122 443.4 382 58.6
arahy.Tifrunner.gnm1.ann1.551JVB Arachis hypogaea HOM05D002380 ORTHO05D006960 3.1e-121 439.1 388 60.3
arahy.Tifrunner.gnm1.ann1.QHFI3V Arachis hypogaea HOM05D002380 ORTHO05D006960 3.1e-121 439.1 388 60.3
SGA_v2.0_scaffold100G29554 Striga asiatica HOM05D002380 ORTHO05D006960 2.9e-119 432.6 393 56.5
THA.LOC104800334 Tarenaya hassleriana HOM05D002380 ORTHO05D006960 3.6e-117 425.6 387 56.6
THA.LOC104809041 Tarenaya hassleriana HOM05D002380 ORTHO05D006960 3.9e-116 422.2 390 55.6
Lsat_1_v5_gn_9_125160 Lactuca sativa HOM05D002380 ORTHO05D006960 1.8e-113 413.3 386 54.7
CDE07G1039 Ceratophyllum demersum HOM05D002380 ORTHO05D006960 9.1e-113 411.0 389 54.2
AL8G23780 Arabidopsis lyrata HOM05D002380 ORTHO05D006960 3.4e-112 409.1 383 54.3
AUR62032480 Chenopodium quinoa HOM05D002380 ORTHO05D006960 7.7e-112 407.9 353 59.5
AT5G49810 Arabidopsis thaliana HOM05D002380 ORTHO05D006960 2.9e-111 406.0 383 54.0
Carub.0008s0969 Capsella rubella HOM05D002380 ORTHO05D006960 2.9e-111 406.0 383 55.1
PGR042G1044 Punica granatum HOM05D002380 ORTHO05D006960 6.5e-111 404.8 390 56.2
A02p12930 Brassica napus HOM05D002380 ORTHO05D006960 1.2e-109 400.6 383 54.6
BraA02t06347Z Brassica rapa HOM05D002380 ORTHO05D006960 1.2e-109 400.6 383 54.6
Lj9C258G8 Lonicera japonica HOM05D002380 ORTHO05D006960 4.7e-109 398.7 386 56.7
C02p21040 Brassica napus HOM05D002380 ORTHO05D006960 6.1e-109 398.3 383 54.3
Sp6g11200 Schrenkiella parvula HOM05D002380 ORTHO05D006960 6.1e-109 398.3 383 54.3
BcaC03g14666 Brassica carinata HOM05D002380 ORTHO05D006960 1.4e-108 397.1 383 54.0
BolC2t08245H Brassica oleracea HOM05D002380 ORTHO05D006960 1.4e-108 397.1 383 54.0
Aa31sc192G20 Aethionema arabicum HOM05D002380 ORTHO05D006960 5.2e-108 395.2 385 52.2
BcaB05g24066 Brassica carinata HOM05D002380 ORTHO05D006960 5.2e-108 395.2 383 54.0
Thhalv10028379m.g Eutrema salsugineum HOM05D002380 ORTHO05D006960 6.7e-108 394.8 383 53.8
Os05g0105000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D006960 2.6e-107 392.9 381 52.5
CARHR258960 Cardamine hirsuta HOM05D002380 ORTHO05D006960 2.8e-106 389.4 383 53.3
Nn5g27142 Nelumbo nucifera HOM05D002380 ORTHO05D006960 6.3e-106 388.3 316 64.2
FAN08G1900 Fragaria x ananassa HOM05D002380 ORTHO05D006960 2.2e-103 379.8 300 66.0
Zm00001eb356170 Zea mays HOM05D002380 ORTHO05D006960 4.2e-102 375.6 381 49.9
ATR1089G010 Amborella trichopoda HOM05D002380 ORTHO05D006960 2.9e-95 352.8 399 48.1
SEGI_21259 Sequoiadendron giganteum HOM05D002380 ORTHO05D006960 1.2e-93 347.4 383 48.8
Rhsim11G0165900 Rhododendron simsii HOM05D002380 ORTHO05D006960 3.0e-92 342.8 220 75.5
Sc03g0005740 Simmondsia chinensis HOM05D002380 ORTHO05D006960 8.3e-90 334.7 220 71.8
SGA_v2.0_scaffold8G04464 Striga asiatica HOM05D002380 ORTHO05D006960 1.7e-87 327.0 298 55.0
SMO301G0051 Selaginella moellendorffii HOM05D002380 ORTHO05D006960 5.0e-79 298.9 385 41.8
AagrBONN_evm.TU.Sc2ySwM_117.3323 Anthoceros agrestis HOM05D002380 ORTHO05D006960 1.5e-75 287.3 382 39.8
Pp3c11_2820 Physcomitrium patens HOM05D002380 ORTHO05D006960 1.5e-75 287.3 379 42.2
Pp3c11_2824 Physcomitrium patens HOM05D002380 ORTHO05D006960 1.5e-75 287.3 379 42.2
Ciclev10003598m.g Citrus clementina HOM05D002380 ORTHO05D006960 2.2e-74 283.5 269 55.8
Mapoly0008s0067 Marchantia polymorpha HOM05D002380 ORTHO05D006960 2.8e-69 266.5 374 40.4
Gohir.A05G109600 Gossypium hirsutum HOM05D002380 ORTHO05D023317 2.1e-56 223.8 243 51.4
Pp3c2_34390 Physcomitrium patens HOM05D002380 ORTHO05D006960 5.8e-43 179.1 344 33.1
Actinidia11733 Actinidia chinensis HOM05D002380 ORTHO05D006960 5.4e-41 172.6 96 86.5
CDE04G0097 Ceratophyllum demersum HOM05D002380 ORTHO05D006960 1.0e-39 168.3 119 67.2
Gohir.A05G109500 Gossypium hirsutum HOM05D002380 ORTHO05D006960 1.1e-36 158.3 96 78.1
Hma1.2p1_0071F.1_g037870 Hydrangea macrophylla HOM05D002380 ORTHO05D023317 7.4e-30 135.6 85 76.5
COL.COLO4_31109 Corchorus olitorius HOM05D002380 ORTHO05D023317 2.8e-29 133.7 108 63.0
HPP92_002030 Vanilla planifolia HOM05D002380 ORTHO05D006960 1.3e-15 88.2 76 59.2
Psat7g071520 Pisum sativum HOM05D002380 ORTHO05D023317 3.1e-12 77.0 116 40.5


User provided reference genes

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