Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 9.2e-289 996.1 483 100.0
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 1.8e-236 822.4 486 81.7
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 1.4e-233 812.8 482 82.2
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 2.1e-224 782.3 482 79.9
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 2.0e-222 775.8 480 78.8
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 1.7e-221 772.7 448 82.8
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 2.4e-220 768.8 458 80.1
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 1.2e-219 766.5 481 76.9
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 6.5e-218 760.8 483 76.2
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 1.5e-217 759.6 462 79.0
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 4.2e-217 758.1 456 80.3
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 1.2e-216 756.5 485 75.7
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 1.4e-215 753.1 483 75.6
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 3.0e-215 751.9 460 78.7
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 4.0e-215 751.5 457 78.1
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 2.2e-213 745.7 462 79.4
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 5.4e-212 741.1 483 73.9
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 7.0e-212 740.7 460 77.4
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 5.9e-211 737.6 453 79.0
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 1.0e-210 736.9 486 75.9
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 2.3e-210 735.7 456 76.3
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 8.6e-210 733.8 462 75.8
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.1e-209 733.4 460 76.1
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 2.5e-209 732.3 459 76.3
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 3.3e-209 731.9 462 75.5
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 4.2e-209 731.5 466 76.4
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 7.2e-209 730.7 457 77.2
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 9.5e-209 730.3 486 73.7
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.4e-207 726.5 459 74.9
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 8.9e-207 723.8 459 75.2
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 2.6e-206 722.2 480 72.3
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 3.4e-206 721.8 464 75.4
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 1.7e-205 719.5 479 71.6
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 3.7e-205 718.4 459 74.7
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 4.9e-205 718.0 456 75.0
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 2.4e-204 715.7 457 75.5
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 3.1e-204 715.3 469 74.6
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 4.1e-204 714.9 464 74.6
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 9.2e-204 713.8 461 75.3
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 2.0e-203 712.6 434 77.9
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 3.5e-203 711.8 460 74.3
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 7.8e-203 710.7 480 71.7
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 1.3e-202 709.9 470 73.2
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 3.8e-202 708.4 462 75.5
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.9e-201 706.1 474 73.6
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 4.0e-199 698.4 477 70.4
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 2.6e-198 695.7 450 75.8
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 3.7e-197 691.8 489 70.3
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 3.5e-195 685.3 475 70.9
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 6.6e-194 681.0 453 75.3
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 6.6e-194 681.0 462 71.0
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 1.9e-193 679.5 495 68.5
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.8e-191 672.9 462 71.0
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 3.1e-191 672.2 481 68.0
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 1.2e-190 670.2 481 68.0
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 1.5e-190 669.8 432 74.8
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 3.4e-190 668.7 440 71.6
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 1.3e-189 666.8 459 69.9
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 6.4e-189 664.5 483 67.7
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.4e-188 662.5 483 67.1
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 4.1e-188 661.8 397 77.8
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 7.0e-188 661.0 461 69.8
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 1.2e-187 660.2 482 67.0
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.7e-186 656.4 400 77.8
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 1.7e-186 656.4 465 72.0
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.7e-186 656.4 443 72.9
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 2.3e-186 656.0 483 66.7
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 8.6e-186 654.1 481 67.4
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 8.6e-186 654.1 481 67.4
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.5e-185 653.3 481 67.2
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 1.5e-185 653.3 406 75.1
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 1.9e-185 652.9 459 69.9
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 2.5e-185 652.5 439 71.5
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 5.6e-185 651.4 429 72.5
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 9.5e-185 650.6 481 66.7
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 2.3e-183 646.0 368 82.6
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 2.9e-181 639.0 464 68.5
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 1.2e-179 633.6 512 62.7
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 1.1e-177 627.1 471 65.2
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 1.9e-177 626.3 435 69.0
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 2.8e-176 622.5 405 74.1
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 3.6e-176 622.1 364 78.6
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 4.7e-176 621.7 449 67.3
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 5.2e-175 618.2 466 66.7
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 5.2e-175 618.2 492 65.4
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 8.9e-175 617.5 385 75.3
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 2.0e-174 616.3 471 64.8
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 1.1e-172 610.5 395 73.7
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 1.3e-165 587.0 450 65.3
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 1.7e-165 586.6 450 63.1
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 1.3e-162 577.0 468 60.0
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 7.3e-161 571.2 334 80.8
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 3.4e-158 562.4 435 62.8
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 3.7e-152 542.3 450 61.8
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 2.5e-140 503.1 371 64.2
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 2.3e-138 496.5 489 55.2
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 6.3e-136 488.4 317 77.0
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 6.5e-109 398.7 212 88.7
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 2.1e-99 367.1 259 73.0
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 6.1e-99 365.5 454 44.1
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 5.4e-95 352.4 219 78.1
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.2e-94 351.3 261 66.7
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 2.9e-93 346.7 385 45.7
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 9.5e-92 341.7 457 42.0
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 1.2e-83 314.7 321 54.8
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 2.1e-75 287.3 269 56.1
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 7.1e-71 272.3 159 79.2
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 6.4e-64 249.2 155 77.4
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 2.2e-56 224.2 268 51.1
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 4.6e-46 189.9 128 71.9
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.4e-31 141.7 123 61.8
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 7.9e-30 136.0 123 56.1
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.3e-27 128.6 76 77.6
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.4e-26 125.2 70 81.4
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 9.0e-26 122.5 81 71.6
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 1.9e-20 104.8 130 49.2
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 1.6e-19 101.7 102 53.9
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.0e-16 92.4 79 51.9
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 7.2e-15 86.3 99 53.5


User provided reference genes

Program Settings