Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29644 Davidia involucrata HOM05D000005 ORTHO05D000012 2.3e-81 305.4 151 100.0
Dinv29648 Davidia involucrata HOM05D000005 ORTHO05D000012 3.4e-48 195.3 129 78.3
Dinv19518 Davidia involucrata HOM05D000005 ORTHO05D000012 1.1e-33 147.1 129 63.6
Dinv29640 Davidia involucrata HOM05D000005 ORTHO05D000012 5.9e-24 114.8 132 51.5
MD07G1103200 Malus domestica HOM05D000005 ORTHO05D000012 2.5e-14 82.8 143 37.8
Dinv01685 Davidia involucrata HOM05D000005 ORTHO05D000012 3.2e-14 82.4 119 42.9
Dinv29687 Davidia involucrata HOM05D000005 ORTHO05D000012 4.2e-14 82.0 134 40.3
MD02G1217100 Malus domestica HOM05D000005 ORTHO05D000012 7.2e-14 81.3 119 39.5
RcHm_v2.0_Chr1g0346831 Rosa chinensis HOM05D000005 ORTHO05D000012 9.4e-14 80.9 126 39.7
Dinv00401 Davidia involucrata HOM05D000005 ORTHO05D000012 1.6e-13 80.1 129 40.3
Dinv29690 Davidia involucrata HOM05D000005 ORTHO05D000012 1.6e-13 80.1 129 40.3
Dinv38460 Davidia involucrata HOM05D000005 ORTHO05D000012 2.7e-13 79.3 129 41.1
RcHm_v2.0_Chr1g0348431 Rosa chinensis HOM05D000005 ORTHO05D000012 3.6e-13 79.0 130 38.5
MD08G1019400 Malus domestica HOM05D000005 ORTHO05D000012 4.7e-13 78.6 127 40.2
Prupe.2G121000 Prunus persica HOM05D000005 ORTHO05D000012 6.1e-13 78.2 123 42.3
Dinv38459 Davidia involucrata HOM05D000005 ORTHO05D000012 8.0e-13 77.8 119 40.3
MD15G1416500 Malus domestica HOM05D000005 ORTHO05D000012 1.8e-12 76.6 127 39.4
RcHm_v2.0_Chr1g0348311 Rosa chinensis HOM05D000005 ORTHO05D000012 1.8e-12 76.6 132 39.4
MD07G1102200 Malus domestica HOM05D000005 ORTHO05D000012 2.3e-12 76.3 125 40.0
MD08G1018200 Malus domestica HOM05D000005 ORTHO05D000012 5.2e-12 75.1 123 38.2
Prupe.2G126900 Prunus persica HOM05D000005 ORTHO05D000012 2.0e-11 73.2 131 39.7
Dinv00400 Davidia involucrata HOM05D000005 ORTHO05D000012 2.6e-11 72.8 131 38.9
MD08G1020800 Malus domestica HOM05D000005 ORTHO05D000012 2.6e-11 72.8 143 35.0
Potri.001G028750 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.3e-11 72.4 132 37.1
MD07G1112300 Malus domestica HOM05D000005 ORTHO05D000012 4.4e-11 72.0 129 36.4
MD02G1302100 Malus domestica HOM05D000005 ORTHO05D000012 7.5e-11 71.2 145 36.6
MD04G1010700 Malus domestica HOM05D000005 ORTHO05D000012 2.2e-10 69.7 129 35.7
Prupe.2G126100 Prunus persica HOM05D000005 ORTHO05D000012 2.2e-10 69.7 123 36.6
Prupe.2G135700 Prunus persica HOM05D000005 ORTHO05D000012 2.2e-10 69.7 129 38.0
Prupe.8G184900 Prunus persica HOM05D000005 ORTHO05D000012 2.8e-10 69.3 135 33.3
Prupe.8G185200 Prunus persica HOM05D000005 ORTHO05D000012 3.7e-10 68.9 151 36.4
RcHm_v2.0_Chr1g0348401 Rosa chinensis HOM05D000005 ORTHO05D000012 3.7e-10 68.9 116 39.7
MD02G1264800 Malus domestica HOM05D000005 ORTHO05D000012 6.3e-10 68.2 119 37.0
Dinv29649 Davidia involucrata HOM05D000005 ORTHO05D000012 8.2e-10 67.8 98 45.9
FvH4_7g09800 Fragaria vesca HOM05D000005 ORTHO05D000012 1.1e-09 67.4 129 35.7
FAN06G0964 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.1e-09 67.4 129 35.7
FAN06G3785 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.1e-09 67.4 129 35.7
Prupe.2G126300 Prunus persica HOM05D000005 ORTHO05D000012 1.1e-09 67.4 136 38.2
RcHm_v2.0_Chr1g0348421 Rosa chinensis HOM05D000005 ORTHO05D000012 1.1e-09 67.4 128 36.7
FAN24G1899 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.8e-09 66.6 131 34.4
Dinv24401 Davidia involucrata HOM05D000005 ORTHO05D184822 2.4e-09 66.2 37 83.8
FAN03G1357 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.4e-09 66.2 129 36.4
FvH4_7g10750 Fragaria vesca HOM05D000005 ORTHO05D000012 5.3e-09 65.1 125 36.0
MD05G1152200 Malus domestica HOM05D000005 ORTHO05D000012 7.0e-09 64.7 121 34.7
FAN06G2906 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.1e-09 64.3 125 36.0
Prupe.6G083100 Prunus persica HOM05D000005 ORTHO05D000012 9.1e-09 64.3 130 36.2
FAN27G3393 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.2e-08 63.9 144 33.3
FAN10G3771 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.6e-08 63.5 129 34.9
RcHm_v2.0_Chr4g0405381 Rosa chinensis HOM05D000005 ORTHO05D000012 1.6e-08 63.5 135 38.5
FAN03G1873 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.0e-08 63.2 125 35.2
FAN10G0336 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.0e-08 63.2 129 34.9
MD17G1072500 Malus domestica HOM05D000005 ORTHO05D000012 2.0e-08 63.2 122 34.4
Lju158P0T0 Lonicera japonica HOM05D000005 ORTHO05D000012 2.7e-08 62.8 132 37.9
Prupe.6G132100 Prunus persica HOM05D000005 ORTHO05D000012 2.7e-08 62.8 125 40.0
CSS0027258 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.5e-08 62.0 77 46.8
Dinv38450 Davidia involucrata HOM05D000005 ORTHO05D000012 4.5e-08 62.0 128 37.5
MD12G1193200 Malus domestica HOM05D000005 ORTHO05D000012 4.5e-08 62.0 119 37.0
Prupe.4G260900 Prunus persica HOM05D000005 ORTHO05D000012 4.5e-08 62.0 137 32.1
Lj5A791G16 Lonicera japonica HOM05D011560 ORTHO05D000012 5.9e-08 61.6 145 33.1
Lj5P787T10 Lonicera japonica HOM05D011560 ORTHO05D000012 5.9e-08 61.6 144 31.9
MD17G1277700 Malus domestica HOM05D000005 ORTHO05D000012 5.9e-08 61.6 131 36.6
Peaxi162Scf03024g00007 Petunia axillaris HOM05D000005 ORTHO05D000012 5.9e-08 61.6 155 33.5
CSS0020094 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.0e-07 60.8 130 36.2
CSS0046876 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.0e-07 60.8 77 46.8
MD07G1079200 Malus domestica HOM05D000005 ORTHO05D000012 1.0e-07 60.8 128 36.7
RcHm_v2.0_Chr1g0348371 Rosa chinensis HOM05D000005 ORTHO05D000012 1.0e-07 60.8 131 35.1
Nitab4.5_0001338g0140 Nicotiana tabacum HOM05D000005 ORTHO05D000012 1.3e-07 60.5 124 37.1
FAN10G1219 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-07 60.1 125 34.4
RcHm_v2.0_Chr6g0281981 Rosa chinensis HOM05D000005 ORTHO05D000012 1.7e-07 60.1 81 45.7
vmacro01859 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 1.7e-07 60.1 128 29.7
PGSC0003DMG400002799 Solanum tuberosum HOM05D000005 ORTHO05D000012 2.2e-07 59.7 127 34.6
CSS0009639 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.9e-07 59.3 49 63.3
CAN.G1076.17 Capsicum annuum HOM05D000005 ORTHO05D000012 2.9e-07 59.3 125 34.4
Nitab4.5_0006159g0020 Nicotiana tabacum HOM05D000005 ORTHO05D000012 2.9e-07 59.3 130 34.6
Prupe.2G101900 Prunus persica HOM05D000005 ORTHO05D000012 2.9e-07 59.3 127 35.4
CAN.G1372.2 Capsicum annuum HOM05D000005 ORTHO05D000012 3.8e-07 58.9 130 36.2
DCAR_026630 Daucus carota HOM05D000005 ORTHO05D000012 3.8e-07 58.9 121 35.5
Dinv38447 Davidia involucrata HOM05D000005 ORTHO05D000012 3.8e-07 58.9 120 35.0
FvH4_7g10520 Fragaria vesca HOM05D000005 ORTHO05D000012 3.8e-07 58.9 122 33.6
Lj9P249T17 Lonicera japonica HOM05D000005 ORTHO05D000012 3.8e-07 58.9 78 48.7
Prupe.2G135500 Prunus persica HOM05D000005 ORTHO05D000012 3.8e-07 58.9 129 35.7
DCAR_001436 Daucus carota HOM05D000005 ORTHO05D000012 5.0e-07 58.5 118 38.1
FAN24G1486 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.0e-07 58.5 131 35.1
Lj2C634G4 Lonicera japonica HOM05D011560 ORTHO05D000012 5.0e-07 58.5 140 31.4
Lj9P259T41 Lonicera japonica HOM05D000005 ORTHO05D000012 5.0e-07 58.5 127 38.6
Nitab4.5_0012277g0010 Nicotiana tabacum HOM05D000005 ORTHO05D000012 5.0e-07 58.5 132 33.3
Nitab4.5_0013216g0020 Nicotiana tabacum HOM05D000005 ORTHO05D000012 5.0e-07 58.5 81 44.4
MD07G1101700 Malus domestica HOM05D000005 ORTHO05D000012 6.5e-07 58.2 134 35.8
Prupe.3G009700 Prunus persica HOM05D000005 ORTHO05D000012 6.5e-07 58.2 135 33.3
ECA248G0631 Erigeron canadensis HOM05D000005 ORTHO05D000012 8.5e-07 57.8 129 31.8
FAN06G4048 Fragaria x ananassa HOM05D000005 ORTHO05D000012 8.5e-07 57.8 121 33.1
PGSC0003DMG401020721 Solanum tuberosum HOM05D000005 ORTHO05D000012 8.5e-07 57.8 134 33.6
PGSC0003DMG402020721 Solanum tuberosum HOM05D000005 ORTHO05D000012 8.5e-07 57.8 134 33.6
FvH4_2g20310 Fragaria vesca HOM05D000005 ORTHO05D000012 1.1e-06 57.4 131 35.1
MD05G1140100 Malus domestica HOM05D000005 ORTHO05D000012 1.1e-06 57.4 142 31.7
Prupe.2G126700 Prunus persica HOM05D000005 ORTHO05D000012 1.1e-06 57.4 76 43.4
Prupe.6G083200 Prunus persica HOM05D000005 ORTHO05D000012 1.1e-06 57.4 129 29.5
FAN10G1850 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.5e-06 57.0 125 33.6
FAN15G2828 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.5e-06 57.0 123 37.4
Prupe.2G126200 Prunus persica HOM05D000005 ORTHO05D000012 1.5e-06 57.0 129 33.3
Solyc01g113620.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 1.5e-06 57.0 76 46.1
DCAR_026631 Daucus carota HOM05D000005 ORTHO05D000012 1.9e-06 56.6 119 34.5
FvH4_7g10510 Fragaria vesca HOM05D000005 ORTHO05D000012 1.9e-06 56.6 127 32.3
Manes.06G012900 Manihot esculenta HOM05D000005 ORTHO05D000012 1.9e-06 56.6 130 32.3
Prupe.3G010300 Prunus persica HOM05D000005 ORTHO05D000012 1.9e-06 56.6 125 34.4
CSS0008258 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.5e-06 56.2 56 51.8
CSS0022340 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.5e-06 56.2 77 44.2
Prupe.2G127000 Prunus persica HOM05D000005 ORTHO05D000012 2.5e-06 56.2 127 36.2
Prupe.3G130900 Prunus persica HOM05D000005 ORTHO05D000012 2.5e-06 56.2 125 34.4
CSS0037441 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 3.2e-06 55.8 77 44.2
DCAR_004352 Daucus carota HOM05D000005 ORTHO05D000012 3.2e-06 55.8 118 37.3
FvH4_2g17330 Fragaria vesca HOM05D000005 ORTHO05D000012 3.2e-06 55.8 112 34.8
Nitab4.5_0003247g0040 Nicotiana tabacum HOM05D000005 ORTHO05D000012 3.2e-06 55.8 134 32.1
Prupe.3G010100 Prunus persica HOM05D000005 ORTHO05D000012 3.2e-06 55.8 131 35.9
Prupe.3G130700 Prunus persica HOM05D000005 ORTHO05D000012 3.2e-06 55.8 142 31.7
Lj5C789T4 Lonicera japonica HOM05D011560 ORTHO05D000012 4.2e-06 55.5 140 29.3
vmacro01620 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 4.2e-06 55.5 132 33.3
vmacro23186 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 4.2e-06 55.5 132 33.3
ECA248G0885 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.5e-06 55.1 121 33.9
Sopen01g044060 Solanum pennellii HOM05D000005 ORTHO05D000012 5.5e-06 55.1 76 44.7
TWI23G0009 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 5.5e-06 55.1 148 29.1
FAN27G2335 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.2e-06 54.7 116 35.3
Nitab4.5_0000288g0100 Nicotiana tabacum HOM05D000005 ORTHO05D000012 7.2e-06 54.7 133 31.6
Nitab4.5_0005847g0010 Nicotiana tabacum HOM05D000005 ORTHO05D000012 7.2e-06 54.7 130 30.8
Peaxi162Scf00000g00029 Petunia axillaris HOM05D000005 ORTHO05D000012 7.2e-06 54.7 130 33.1
vmacro01857 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 7.2e-06 54.7 131 32.1


User provided reference genes

Program Settings