Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29599 Davidia involucrata HOM05D008094 ORTHO05D010082 7.1e-78 293.9 152 100.0
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 1.5e-38 163.3 158 65.2
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 5.2e-36 154.8 155 61.3
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 5.5e-30 134.8 160 55.6
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 3.4e-27 125.6 141 53.9
Nn3g18571 Nelumbo nucifera HOM05D008094 ORTHO05D010082 9.8e-27 124.0 153 53.6
Aqoxy5G01193 Aquilegia oxysepala HOM05D008094 ORTHO05D010082 3.7e-26 122.1 146 54.8
Nn3g19209 Nelumbo nucifera HOM05D008094 ORTHO05D010082 2.9e-23 112.5 144 53.5
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 2.5e-22 109.4 162 50.6
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 4.2e-22 108.6 149 50.3
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 8.0e-21 104.4 150 46.0
Nn1g09196 Nelumbo nucifera HOM05D008094 ORTHO05D010082 1.8e-20 103.2 140 51.4
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 4.4e-19 98.6 146 50.7
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 1.3e-18 97.1 144 49.3
Eucgr.I02770 Eucalyptus grandis HOM05D008094 ORTHO05D010082 1.3e-18 97.1 143 50.3
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 2.8e-18 95.9 174 44.3
Nitab4.5_0006171g0010 Nicotiana tabacum HOM05D008094 ORTHO05D010082 3.7e-18 95.5 169 46.7
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 8.3e-18 94.4 150 50.0
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.4e-17 93.6 148 47.3
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 2.4e-17 92.8 165 46.7
Potri.019G078000 Populus trichocarpa HOM05D008094 ORTHO05D010082 9.2e-17 90.9 126 47.6
PGSC0003DMG400024912 Solanum tuberosum HOM05D008094 ORTHO05D010082 3.5e-16 89.0 172 41.3
CiPaw.07G234200 Carya illinoinensis HOM05D008094 ORTHO05D010082 5.9e-16 88.2 141 48.2
Psat1g222640 Pisum sativum HOM05D008094 ORTHO05D010082 1.3e-15 87.0 149 45.6
Lj6g0003255 Lotus japonicus HOM05D008094 ORTHO05D010082 1.7e-15 86.7 140 47.9
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.1e-14 84.0 156 44.9
Sabra19G0088900 Salix brachista HOM05D008094 ORTHO05D010082 1.1e-14 84.0 126 44.4
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 1.5e-14 83.6 150 42.0
CiPaw.06G174300 Carya illinoinensis HOM05D008094 ORTHO05D010082 1.9e-14 83.2 143 45.5
Sopen01g045830 Solanum pennellii HOM05D008094 ORTHO05D010082 1.9e-14 83.2 164 42.7
Gohir.A01G184400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 2.5e-14 82.8 151 43.7
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 2.5e-14 82.8 150 44.7
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 7.3e-14 81.3 142 43.0
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 7.3e-14 81.3 126 49.2
Oeu021214.1 Olea europaea HOM05D008094 ORTHO05D010082 1.6e-13 80.1 145 43.4
TPR.G2107 Trifolium pratense HOM05D008094 ORTHO05D010082 2.1e-13 79.7 151 41.1
Ciclev10002589m.g Citrus clementina HOM05D008094 ORTHO05D010082 3.6e-13 79.0 170 37.6
MBI03_g07689_MAGBIO Magnolia biondii HOM05D008094 ORTHO05D010082 4.7e-13 78.6 133 42.1
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 4.7e-13 78.6 160 39.4
ClCG10G007120 Citrullus lanatus HOM05D008094 ORTHO05D010082 1.0e-12 77.4 154 40.9
Gohir.D01G175400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.0e-12 77.4 144 42.4
Actinidia01611 Actinidia chinensis HOM05D008094 ORTHO05D010082 1.4e-12 77.0 56 71.4
Lalb_Chr15g0090761 Lupinus albus HOM05D008094 ORTHO05D010082 1.4e-12 77.0 158 37.3
Solyc01g103470.2 Solanum lycopersicum HOM05D008094 ORTHO05D010082 6.8e-12 74.7 161 41.0
Medtr2g005710 Medicago truncatula HOM05D008094 ORTHO05D010082 8.9e-12 74.3 151 42.4
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 8.9e-12 74.3 140 43.6
Lsat_1_v5_gn_5_104661 Lactuca sativa HOM05D008094 ORTHO05D010082 5.7e-11 71.6 169 40.8
RcHm_v2.0_Chr7g0220641 Rosa chinensis HOM05D031323 ORTHO05D010082 5.7e-11 71.6 158 38.0
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 5.7e-11 71.6 136 41.9
Peaxi162Scf00011g01411 Petunia axillaris HOM05D008094 ORTHO05D010082 2.2e-10 69.7 183 42.6
Gohir.A03G215550 Gossypium hirsutum HOM05D008094 ORTHO05D010082 3.7e-10 68.9 120 45.0
Atru.chr6.518 Acer truncatum HOM05D008094 ORTHO05D010082 6.4e-10 68.2 142 37.3
Migut.C01270 Erythranthe guttata HOM05D008094 ORTHO05D010082 1.8e-09 66.6 139 38.1
PSO782G4978 Papaver somniferum HOM05D008094 ORTHO05D010082 4.1e-09 65.5 64 64.1
Ca_00034_v3 Cicer arietinum L. HOM05D008094 ORTHO05D010082 5.4e-09 65.1 100 43.0
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 7.0e-09 64.7 78 55.1
arahy.Tifrunner.gnm1.ann1.8474VB Arachis hypogaea HOM05D008094 ORTHO05D010082 2.7e-08 62.8 84 50.0
arahy.Tifrunner.gnm1.ann1.V5JGY8 Arachis hypogaea HOM05D008094 ORTHO05D010082 2.7e-08 62.8 84 50.0
Manes.07G025000 Manihot esculenta HOM05D008094 ORTHO05D010082 5.9e-08 61.6 140 40.0
Lsat_1_v5_gn_7_76841 Lactuca sativa HOM05D008094 ORTHO05D010082 1.7e-07 60.1 66 43.9
ECA234G3545 Erigeron canadensis HOM05D008094 ORTHO05D010082 2.3e-07 59.7 170 36.5
Oeu045164.1 Olea europaea HOM05D008094 ORTHO05D010082 3.9e-07 58.9 88 46.6
Migut.B00764 Erythranthe guttata HOM05D008094 ORTHO05D010082 5.0e-07 58.5 115 40.0
arahy.Tifrunner.gnm1.ann1.4TXG74 Arachis hypogaea HOM05D008094 ORTHO05D010082 8.6e-07 57.8 87 47.1
ATR1136G131 Amborella trichopoda HOM05D008094 ORTHO05D010082 1.5e-06 57.0 58 56.9
SGA_v2.0_scaffold83G26277 Striga asiatica HOM05D008094 ORTHO05D010082 3.3e-06 55.8 141 35.5
Cfa012997 Carpinus fangiana HOM05D008094 ORTHO05D010082 4.3e-06 55.5 67 50.7
Glyma.16G002700 Glycine max HOM05D008094 ORTHO05D010082 9.5e-06 54.3 68 52.9
Gohir.A13G118800 Gossypium hirsutum HOM05D023304 ORTHO05D025172 9.5e-06 54.3 64 51.6


User provided reference genes

Program Settings