Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29577 Davidia involucrata HOM05D007349 ORTHO05D009317 6.9e-72 273.9 138 100.0
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 2.6e-55 218.8 120 91.7
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 7.7e-55 217.2 120 91.7
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 1.3e-25 120.2 125 48.0
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 6.3e-25 117.9 119 54.6
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 1.8e-24 116.3 122 51.6
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 1.7e-22 109.8 121 48.8
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 2.5e-21 105.9 121 50.4
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 4.3e-21 105.1 154 42.9
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 5.6e-21 104.8 127 48.8
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 8.0e-20 100.9 124 48.4
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 1.2e-18 97.1 127 44.9
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 4.9e-17 91.7 120 45.8
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 2.4e-16 89.4 120 39.2
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 4.1e-16 88.6 139 39.6
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 3.9e-14 82.0 118 46.6
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 1.9e-13 79.7 121 43.0
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 3.3e-13 79.0 118 43.2
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 7.3e-13 77.8 118 44.9
Actinidia33026 Actinidia chinensis HOM05D007349 ORTHO05D009317 1.2e-12 77.0 88 52.3
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 1.6e-12 76.6 118 44.9
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 2.8e-12 75.9 123 43.9
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 6.2e-12 74.7 124 44.4
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 8.1e-12 74.3 121 43.8
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 1.4e-11 73.6 128 39.1
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 1.5e-10 70.1 131 38.2
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 1.5e-10 70.1 126 34.9
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 2.0e-10 69.7 115 36.5
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 9.8e-10 67.4 131 35.9
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 1.3e-09 67.0 120 37.5
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 1.7e-09 66.6 118 38.1
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 2.2e-09 66.2 124 41.1
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 3.7e-09 65.5 99 42.4
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 6.4e-09 64.7 131 35.1
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 8.3e-09 64.3 128 41.4
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 1.1e-08 63.9 124 37.9
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.1e-08 63.9 116 34.5
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 1.4e-08 63.5 121 34.7
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 2.4e-08 62.8 164 30.5
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 2.4e-08 62.8 129 36.4
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 3.2e-08 62.4 124 40.3
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 4.1e-08 62.0 121 34.7
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 4.1e-08 62.0 151 32.5
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 1.2e-07 60.5 113 43.4
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 2.1e-07 59.7 125 38.4
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 2.1e-07 59.7 125 38.4
Peaxi162Scf00938g00313 Petunia axillaris HOM05D007349 ORTHO05D009317 3.5e-07 58.9 74 40.5
PSO832G0714 Papaver somniferum HOM05D007349 ORTHO05D009317 6.0e-07 58.2 110 40.9
CAN.G1910.1 Capsicum annuum HOM05D007349 ORTHO05D009317 7.8e-07 57.8 79 40.5
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 7.8e-07 57.8 115 31.3
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 1.0e-06 57.4 140 35.0
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 1.7e-06 56.6 129 33.3
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 1.7e-06 56.6 128 36.7
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 1.7e-06 56.6 124 35.5
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 3.0e-06 55.8 124 33.1
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 3.0e-06 55.8 113 32.7
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 8.6e-06 54.3 124 35.5


User provided reference genes

Program Settings