Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29555 Davidia involucrata HOM05D005047 ORTHO05D006540 2.3e-161 572.4 343 100.0
Dinv38281 Davidia involucrata HOM05D005047 ORTHO05D006540 7.0e-81 305.1 204 79.9
Psat6g048720 Pisum sativum HOM05D005047 ORTHO05D006540 2.5e-78 296.6 200 79.5
TAR633G1642 Trochodendron aralioides HOM05D005047 ORTHO05D006540 4.2e-78 295.8 202 78.7
Medtr1g047390 Medicago truncatula HOM05D005047 ORTHO05D006540 5.5e-78 295.4 200 79.0
Hund19253 Selenicereus undatus HOM05D005047 ORTHO05D006540 1.6e-77 293.9 197 79.2
CSS0002501 Camellia sinensis var. sinensis HOM05D005047 ORTHO05D006540 4.7e-77 292.4 204 76.0
Ca_11862_v3 Cicer arietinum L. HOM05D005047 ORTHO05D006540 4.7e-77 292.4 200 78.5
Haze_11554 Corylus avellana HOM05D005047 ORTHO05D006540 1.4e-76 290.8 188 80.9
Hma1.2p1_0903F.1_g235140 Hydrangea macrophylla HOM05D005047 ORTHO05D006540 1.8e-76 290.4 204 77.0
Glyma.10G125100 Glycine max HOM05D005047 ORTHO05D006540 2.3e-76 290.0 194 78.9
vmacro00514 Vaccinium macrocarpon HOM05D005047 ORTHO05D006540 2.3e-76 290.0 198 77.3
CiPaw.01G126600 Carya illinoinensis HOM05D005047 ORTHO05D006540 3.0e-76 289.7 192 79.7
Ciclev10005905m.g Citrus clementina HOM05D005047 ORTHO05D006540 4.0e-76 289.3 198 77.8
Cc03_g07220 Coffea canephora HOM05D005047 ORTHO05D006540 6.8e-76 288.5 200 76.0
Cpa.g.sc59.91 Carica papaya HOM05D005047 ORTHO05D006540 1.2e-75 287.7 198 76.8
GSVIVG01029046001 Vitis vinifera HOM05D005047 ORTHO05D006540 1.2e-75 287.7 201 77.1
HanXRQChr01g0022691 Helianthus annuus HOM05D005047 ORTHO05D006540 1.5e-75 287.3 199 75.4
RcHm_v2.0_Chr4g0396911 Rosa chinensis HOM05D005047 ORTHO05D006540 1.5e-75 287.3 200 77.0
FAN07G0410 Fragaria x ananassa HOM05D005047 ORTHO05D006540 2.0e-75 287.0 194 77.8
Lalb_Chr01g0010841 Lupinus albus HOM05D005047 ORTHO05D006540 2.0e-75 287.0 192 79.2
Lj6g0004838 Lotus japonicus HOM05D005047 ORTHO05D006540 2.6e-75 286.6 198 77.3
FAN12G1457 Fragaria x ananassa HOM05D005047 ORTHO05D006540 4.4e-75 285.8 194 77.3
Nitab4.5_0010267g0010 Nicotiana tabacum HOM05D005047 ORTHO05D006540 5.7e-75 285.4 199 76.4
Phvul.007G236950 Phaseolus vulgaris HOM05D005047 ORTHO05D006540 5.7e-75 285.4 201 75.6
CANSAT78G0753 Cannabis sativa HOM05D005047 ORTHO05D006540 7.5e-75 285.0 191 79.1
CANSAT78G2209 Cannabis sativa HOM05D005047 ORTHO05D006540 7.5e-75 285.0 191 79.1
Migut.N00337 Erythranthe guttata HOM05D005047 ORTHO05D006540 7.5e-75 285.0 188 79.3
Glyma.20G077400 Glycine max HOM05D005047 ORTHO05D006540 1.3e-74 284.3 194 77.3
Sopen09g034350 Solanum pennellii HOM05D005047 ORTHO05D006540 2.2e-74 283.5 199 75.9
Thecc.04G211900 Theobroma cacao HOM05D005047 ORTHO05D006540 2.2e-74 283.5 185 78.9
PGSC0003DMG400029615 Solanum tuberosum HOM05D005047 ORTHO05D006540 2.8e-74 283.1 199 75.9
Prupe.1G060800 Prunus persica HOM05D005047 ORTHO05D006540 3.7e-74 282.7 200 76.0
PGR142G1511 Punica granatum HOM05D005047 ORTHO05D006540 8.3e-74 281.6 200 75.0
Gorai.006G219600 Gossypium raimondii HOM05D005047 ORTHO05D006540 1.1e-73 281.2 200 74.0
AUR62032663 Chenopodium quinoa HOM05D005047 ORTHO05D006540 1.8e-73 280.4 194 76.8
Solyc09g091420.4 Solanum lycopersicum HOM05D005047 ORTHO05D006540 2.4e-73 280.0 199 74.9
Gohir.D09G196200 Gossypium hirsutum HOM05D005047 ORTHO05D006540 3.1e-73 279.6 200 74.0
Potri.001G052400 Populus trichocarpa HOM05D005047 ORTHO05D006540 3.1e-73 279.6 198 75.3
COL.COLO4_34082 Corchorus olitorius HOM05D005047 ORTHO05D006540 4.1e-73 279.3 185 78.4
TWI73G0442 Tripterygium wilfordii HOM05D005047 ORTHO05D006540 4.1e-73 279.3 191 77.5
Duzib212G0386 Durio zibethinus HOM05D005047 ORTHO05D006540 5.3e-73 278.9 198 74.7
ECA248G2813 Erigeron canadensis HOM05D005047 ORTHO05D006540 7.0e-73 278.5 198 73.7
Gohir.A09G202200 Gossypium hirsutum HOM05D005047 ORTHO05D006540 7.0e-73 278.5 185 77.3
PSO782G5131 Papaver somniferum HOM05D005047 ORTHO05D006540 1.2e-72 277.7 191 76.4
Ah.13g075240 Amaranthus hybridus HOM05D005047 ORTHO05D006540 2.0e-72 276.9 192 76.0
Lj6A611T47 Lonicera japonica HOM05D005047 ORTHO05D006540 2.0e-72 276.9 200 76.0
Eucgr.H00094 Eucalyptus grandis HOM05D005047 ORTHO05D006540 2.7e-72 276.6 188 77.1
Sed0007809 Sechium edule HOM05D005047 ORTHO05D006540 2.7e-72 276.6 200 74.0
ClCG05G003600 Citrullus lanatus HOM05D005047 ORTHO05D006540 3.5e-72 276.2 185 77.8
PSO478G4795 Papaver somniferum HOM05D005047 ORTHO05D006540 3.5e-72 276.2 191 76.4
Sc13g0002770 Simmondsia chinensis HOM05D005047 ORTHO05D006540 3.5e-72 276.2 184 77.2
Aa31LG9G3930 Aethionema arabicum HOM05D005047 ORTHO05D006540 5.9e-72 275.4 199 72.9
THA.LOC104808728 Tarenaya hassleriana HOM05D005047 ORTHO05D006540 5.9e-72 275.4 199 73.4
CsaV3_3G011290 Cucumis sativus L. HOM05D005047 ORTHO05D006540 7.7e-72 275.0 190 77.4
SalBow3G2150 Salvia bowleyana HOM05D005047 ORTHO05D006540 1.0e-71 274.6 227 65.6
EL10Ac3g06787 Beta vulgaris HOM05D005047 ORTHO05D006540 1.3e-71 274.2 191 76.4
Potri.003G175800 Populus trichocarpa HOM05D005047 ORTHO05D006540 1.7e-71 273.9 201 74.6
VMungo0720G0344 Vigna mungo HOM05D005047 ORTHO05D006540 1.7e-71 273.9 246 61.8
BcaB02g08656 Brassica carinata HOM05D005047 ORTHO05D006540 2.2e-71 273.5 198 72.7
BraA04t16537Z Brassica rapa HOM05D005047 ORTHO05D006540 2.2e-71 273.5 199 72.9
AT4G13720 Arabidopsis thaliana HOM05D005047 ORTHO05D006540 5.0e-71 272.3 184 76.1
C04p42210 Brassica napus HOM05D005047 ORTHO05D006540 5.0e-71 272.3 200 72.0
AL7G42780 Arabidopsis lyrata HOM05D005047 ORTHO05D006540 6.5e-71 271.9 184 76.1
CDE04G3429 Ceratophyllum demersum HOM05D005047 ORTHO05D006540 6.5e-71 271.9 194 73.2
Thhalv10026260m.g Eutrema salsugineum HOM05D005047 ORTHO05D006540 6.5e-71 271.9 184 75.5
Sp7g11500 Schrenkiella parvula HOM05D005047 ORTHO05D006540 6.5e-71 271.9 184 75.5
A04p08470 Brassica napus HOM05D005047 ORTHO05D006540 2.5e-70 270.0 197 72.6
BolC4t25799H Brassica oleracea HOM05D005047 ORTHO05D006540 2.5e-70 270.0 197 72.6
BcaC02g09395 Brassica carinata HOM05D005047 ORTHO05D006540 3.2e-70 269.6 182 75.8
TPR.G10100 Trifolium pratense HOM05D005047 ORTHO05D006540 3.2e-70 269.6 171 81.9
Sabra03G0128700 Salix brachista HOM05D005047 ORTHO05D006540 4.2e-70 269.2 215 70.7
SGA_v2.0_scaffold2G00831 Striga asiatica HOM05D005047 ORTHO05D006540 2.1e-69 266.9 233 64.4
AL5G12130 Arabidopsis lyrata HOM05D005047 ORTHO05D006540 2.7e-69 266.5 184 74.5
Os10g0457500 Oryza sativa ssp. japonica HOM05D005047 ORTHO05D006540 8.8e-68 261.5 194 71.1
HPP92_015205 Vanilla planifolia HOM05D005047 ORTHO05D006540 1.2e-67 261.2 182 73.1
Zm00001eb046670 Zea mays HOM05D005047 ORTHO05D006540 1.5e-67 260.8 183 73.8
Lsat_1_v5_gn_0_4860 Lactuca sativa HOM05D005047 ORTHO05D006540 1.7e-66 257.3 241 61.0
unitig_749.g13975 Utricularia gibba HOM05D005047 ORTHO05D006540 2.2e-66 256.9 329 49.8
Mapoly0026s0018 Marchantia polymorpha HOM05D005047 ORTHO05D006540 6.3e-66 255.4 182 72.5
Manes.15G048800 Manihot esculenta HOM05D005047 ORTHO05D006540 1.1e-65 254.6 184 70.7
Manes.03G152700 Manihot esculenta HOM05D005047 ORTHO05D006540 1.2e-64 251.1 200 66.5
AUR62035305 Chenopodium quinoa HOM05D005047 ORTHO05D006540 2.7e-64 250.0 257 57.6
Aa31LG9G3940 Aethionema arabicum HOM05D005047 ORTHO05D006540 5.0e-63 245.7 227 59.5
Oeu006715.2 Olea europaea HOM05D005047 ORTHO05D006540 6.6e-63 245.4 208 68.3
Nn3g19880 Nelumbo nucifera HOM05D005047 ORTHO05D006540 2.5e-62 243.4 194 69.1
Pp3c16_19640 Physcomitrium patens HOM05D005047 ORTHO05D006540 3.3e-62 243.0 200 66.0
AagrBONN_evm.TU.Sc2ySwM_344.3277 Anthoceros agrestis HOM05D005047 ORTHO05D006540 6.8e-60 235.3 182 67.0
SMO367G0232 Selaginella moellendorffii HOM05D005047 ORTHO05D006540 5.7e-59 232.3 179 67.6
Nitab4.5_0010728g0010 Nicotiana tabacum HOM05D005047 ORTHO05D006540 4.1e-57 226.1 203 64.5
CAN.G500.97 Capsicum annuum HOM05D005047 ORTHO05D006540 5.4e-57 225.7 151 76.8
Carub.0007s2874 Capsella rubella HOM05D005047 ORTHO05D006540 1.6e-56 224.2 154 76.0
Aqoxy2G03810 Aquilegia oxysepala HOM05D005047 ORTHO05D006540 3.1e-52 209.9 198 60.1
Peaxi162Scf00047g01312 Petunia axillaris HOM05D005047 ORTHO05D006540 1.4e-49 201.1 194 58.2
Rhsim09G0049500 Rhododendron simsii HOM05D005047 ORTHO05D006540 1.4e-49 201.1 130 77.7
arahy.Tifrunner.gnm1.ann1.BK86JE Arachis hypogaea HOM05D005047 ORTHO05D006540 9.2e-49 198.4 186 60.2
ATR0088G035 Amborella trichopoda HOM05D005047 ORTHO05D006540 3.5e-48 196.4 140 72.1
SHI24117 Sapria himalayana HOM05D005047 ORTHO05D006540 6.6e-47 192.2 196 57.1
MBI07_g19553_MAGBIO Magnolia biondii HOM05D005047 ORTHO05D006540 1.1e-46 191.4 208 57.2
MCO04G006 Micromonas commoda HOM05D005047 ORTHO05D006540 1.6e-45 187.6 182 54.9
Atru.chr4.1794 Acer truncatum HOM05D005047 ORTHO05D006540 6.2e-45 185.7 130 74.6
Actinidia37393 Actinidia chinensis HOM05D005047 ORTHO05D006540 1.5e-43 181.0 205 58.0
Cre02.g095089 Chlamydomonas reinhardtii HOM05D005047 ORTHO05D006540 4.9e-42 176.0 178 53.9
Zm00001eb377030 Zea mays HOM05D005047 ORTHO05D006540 8.3e-42 175.3 132 68.9
QL06p023224 Quercus lobata HOM05D005047 ORTHO05D006540 2.7e-40 170.2 101 80.2
PRCOL_00006994 Prasinoderma coloniale HOM05D005047 ORTHO05D006540 1.9e-38 164.1 180 50.6
CARHR219510 Cardamine hirsuta HOM05D005047 ORTHO05D006540 2.5e-38 163.7 132 65.9
MD13G1230900 Malus domestica HOM05D005047 ORTHO05D006540 9.5e-38 161.8 119 69.7
arahy.Tifrunner.gnm1.ann1.0X932T Arachis hypogaea HOM05D005047 ORTHO05D006540 1.1e-36 158.3 97 76.3
Zm00001eb086240 Zea mays HOM05D005047 ORTHO05D006540 1.2e-35 154.8 136 61.0
Cfa024488 Carpinus fangiana HOM05D005047 ORTHO05D006540 2.0e-35 154.1 176 49.4
Carub.0007s2873 Capsella rubella HOM05D005047 ORTHO05D006540 1.7e-34 151.0 91 78.0
Zm00001eb102100 Zea mays HOM05D005047 ORTHO05D006540 1.0e-31 141.7 132 62.1
Zm00001eb177140 Zea mays HOM05D005047 ORTHO05D006540 3.0e-31 140.2 95 70.5
DCAR_002273 Daucus carota HOM05D005047 ORTHO05D006540 3.9e-31 139.8 88 83.0
Sed0007961 Sechium edule HOM05D005047 ORTHO05D006540 6.6e-31 139.0 179 52.0
Cre13.g568950 Chlamydomonas reinhardtii HOM05D005047 ORTHO05D006540 4.3e-30 136.3 163 46.0
MSTRG.21943 Avicennia marina HOM05D005047 ORTHO05D006540 1.6e-29 134.4 104 71.2
FvH4_4g05750 Fragaria vesca HOM05D005047 ORTHO05D006540 2.8e-29 133.7 88 80.7
QL06p023220 Quercus lobata HOM05D005047 ORTHO05D006540 2.8e-29 133.7 80 87.5
TWI09G0343 Tripterygium wilfordii HOM05D005047 ORTHO05D006540 2.8e-29 133.7 96 70.8
TAR636G1612 Trochodendron aralioides HOM05D005047 ORTHO05D006540 1.4e-28 131.3 88 79.5
MELO3C031602.2 Cucumis melo HOM05D005047 ORTHO05D006540 5.2e-28 129.4 79 84.8
Zm00001eb180620 Zea mays HOM05D005047 ORTHO05D006540 2.9e-26 123.6 79 72.2
FAN17G1156 Fragaria x ananassa HOM05D005047 ORTHO05D006540 1.5e-22 111.3 65 80.0
Zm00001eb425490 Zea mays HOM05D005047 ORTHO05D006540 1.5e-19 101.3 64 70.3
SEGI_09208 Sequoiadendron giganteum HOM05D005047 ORTHO05D006540 2.4e-17 94.0 64 71.9
Medtr1g047400 Medicago truncatula HOM05D005047 ORTHO05D006540 1.1e-14 85.1 59 76.3
Sabra01G0036900 Salix brachista HOM05D005047 ORTHO05D006540 2.5e-14 84.0 48 79.2
CBR_g49288 Chara braunii HOM05D005047 ORTHO05D006540 1.1e-12 78.6 54 64.8
TAR633G2043 Trochodendron aralioides HOM05D004282 ORTHO05D006540 4.5e-11 73.2 42 88.1
Dinv38283 Davidia involucrata HOM05D005047 ORTHO05D180843 1.3e-10 71.6 48 75.0
EL10Ac6g14438 Beta vulgaris HOM05D005047 ORTHO05D006540 9.3e-09 65.5 37 83.8
EL10Ac7g17560 Beta vulgaris HOM05D005047 ORTHO05D006373 1.6e-08 64.7 37 83.8
arahy.Tifrunner.gnm1.ann1.FRRS2Q Arachis hypogaea HOM05D005047 ORTHO05D084578 3.5e-08 63.5 63 54.0
Glyma.12G173400 Glycine max HOM05D005047 ORTHO05D006540 4.6e-08 63.2 37 81.1
TPR.G40557 Trifolium pratense HOM05D005047 ORTHO05D006540 2.3e-07 60.8 46 73.9


User provided reference genes

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