Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 6.4e-88 327.4 168 100.0
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 5.5e-47 191.4 132 74.2
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 8.8e-45 184.1 139 66.9
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 7.4e-44 181.0 111 78.4
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 7.4e-44 181.0 111 78.4
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 3.7e-43 178.7 130 67.7
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 6.3e-43 177.9 108 77.8
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 1.4e-42 176.8 105 79.0
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.4e-42 176.0 95 87.4
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 4.1e-42 175.3 104 81.7
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 4.5e-41 171.8 105 79.0
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 5.9e-41 171.4 116 74.1
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 5.9e-41 171.4 122 73.8
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 1.0e-40 170.6 164 64.0
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.7e-40 169.9 112 72.3
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 2.2e-40 169.5 117 70.9
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 2.2e-40 169.5 97 80.4
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 2.2e-40 169.5 104 74.0
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 2.9e-40 169.1 114 71.9
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 2.9e-40 169.1 134 65.7
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 5.0e-40 168.3 101 80.2
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 8.5e-40 167.5 108 73.1
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 8.5e-40 167.5 101 79.2
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.5e-39 166.8 97 81.4
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 1.5e-39 166.8 108 75.0
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.5e-39 166.8 117 67.5
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 1.9e-39 166.4 112 70.5
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 1.9e-39 166.4 112 70.5
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 1.9e-39 166.4 97 79.4
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 2.5e-39 166.0 112 69.6
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 2.5e-39 166.0 108 75.9
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 2.5e-39 166.0 104 77.9
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 2.5e-39 166.0 104 77.9
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 3.2e-39 165.6 103 78.6
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 3.2e-39 165.6 108 73.1
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 4.2e-39 165.2 108 74.1
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 4.2e-39 165.2 121 66.9
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 4.2e-39 165.2 121 66.9
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 7.2e-39 164.5 104 79.8
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 7.2e-39 164.5 104 79.8
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 7.2e-39 164.5 104 76.9
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 9.4e-39 164.1 107 74.8
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 1.2e-38 163.7 112 69.6
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 1.2e-38 163.7 112 69.6
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 1.2e-38 163.7 126 63.5
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 1.2e-38 163.7 105 76.2
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 1.2e-38 163.7 142 62.0
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 1.6e-38 163.3 189 53.4
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 2.7e-38 162.5 98 77.6
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 2.7e-38 162.5 112 70.5
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 3.6e-38 162.2 97 75.3
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 4.7e-38 161.8 101 70.3
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 6.1e-38 161.4 111 70.3
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 6.1e-38 161.4 96 80.2
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 6.1e-38 161.4 96 80.2
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 6.1e-38 161.4 142 61.3
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 8.0e-38 161.0 143 60.8
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.4e-37 160.2 132 68.2
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 1.4e-37 160.2 115 68.7
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 1.4e-37 160.2 134 65.7
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 1.4e-37 160.2 95 75.8
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 3.0e-37 159.1 125 61.6
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 4.0e-37 158.7 107 70.1
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 6.7e-37 157.9 108 75.9
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 8.8e-37 157.5 103 73.8
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 8.8e-37 157.5 110 71.8
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.1e-36 157.1 153 55.6
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 2.0e-36 156.4 106 70.8
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 2.6e-36 156.0 113 62.8
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 2.6e-36 156.0 115 63.5
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 3.3e-36 155.6 105 71.4
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 5.7e-36 154.8 115 64.3
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 1.7e-35 153.3 119 64.7
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 6.3e-35 151.4 150 55.3
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 6.3e-35 151.4 119 63.9
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 1.1e-34 150.6 96 72.9
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 1.4e-34 150.2 167 56.3
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 1.4e-34 150.2 95 74.7
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 3.1e-34 149.1 113 61.9
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 4.1e-34 148.7 93 73.1
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 4.1e-34 148.7 112 63.4
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 1.2e-33 147.1 104 68.3
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 1.6e-33 146.7 102 71.6
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 1.3e-32 143.7 117 59.8
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 1.7e-32 143.3 96 68.8
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 2.2e-32 142.9 93 71.0
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 4.2e-31 138.7 124 59.7
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 4.2e-31 138.7 100 67.0
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 1.6e-30 136.7 102 68.6
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 1.2e-28 130.6 70 84.3
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 1.2e-28 130.6 86 73.3
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 5.7e-28 128.3 144 54.9
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 9.8e-28 127.5 72 83.3
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 7.0e-26 121.3 71 78.9
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 5.9e-25 118.2 95 54.7
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 8.5e-24 114.4 110 57.3
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 1.5e-23 113.6 110 57.3
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 1.5e-23 113.6 97 61.9
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 2.5e-23 112.8 97 50.5
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 3.2e-23 112.5 108 58.3
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 4.2e-23 112.1 161 45.3
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 5.5e-23 111.7 119 54.6
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 2.3e-21 106.3 96 59.4
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 8.8e-21 104.4 100 55.0
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 4.4e-20 102.1 54 92.6
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 7.0e-18 94.7 57 78.9
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 1.2e-17 94.0 142 47.9
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 2.0e-17 93.2 116 44.0
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 2.3e-16 89.7 75 61.3
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 2.9e-16 89.4 48 87.5
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 1.2e-14 84.0 59 67.8
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 5.2e-13 78.6 44 86.4
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 6.8e-13 78.2 50 76.0
CSS0022350 Camellia sinensis var. sinensis HOM05D025454 ORTHO05D024692 4.9e-11 72.0 97 54.6
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 1.2e-09 67.4 72 40.3
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.0e-09 66.6 62 56.5
CSS0002784 Camellia sinensis var. sinensis HOM05D025454 ORTHO05D024692 5.0e-08 62.0 96 53.1
CSS0031847 Camellia sinensis var. sinensis HOM05D025454 ORTHO05D024692 5.0e-08 62.0 96 53.1
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 8.6e-08 61.2 91 34.1
Thecc.01G162200 Theobroma cacao HOM05D006846 ORTHO05D008473 1.6e-06 57.0 65 55.4


User provided reference genes

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