Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 2.9e-232 808.1 399 100.0
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.5e-167 593.2 334 84.7
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.5e-167 593.2 334 84.7
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 1.4e-165 586.6 338 82.8
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 5.9e-164 581.3 337 83.1
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 5.7e-159 564.7 340 80.6
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 9.1e-157 557.4 411 69.1
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.9e-154 549.7 365 73.2
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 7.9e-153 544.3 418 67.7
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.8e-152 543.1 331 77.9
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 2.3e-152 542.7 410 68.3
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 1.5e-151 540.0 405 68.1
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.5e-151 540.0 329 78.4
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 5.7e-151 538.1 418 67.2
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 2.2e-150 536.2 402 69.4
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 4.8e-150 535.0 323 79.3
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 8.2e-150 534.3 402 68.9
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 1.1e-149 533.9 415 69.2
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 1.4e-149 533.5 402 68.9
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 4.1e-149 531.9 403 70.0
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 7.0e-149 531.2 399 68.4
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 7.7e-148 527.7 405 67.7
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 1.7e-147 526.6 331 76.4
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 3.8e-147 525.4 334 75.1
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 6.5e-147 524.6 329 75.7
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.5e-146 523.5 370 70.3
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 3.2e-146 522.3 328 76.8
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 9.4e-146 520.8 403 66.7
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 1.2e-145 520.4 402 66.2
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 2.1e-145 519.6 408 67.6
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 2.1e-145 519.6 404 65.6
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 2.7e-145 519.2 404 66.6
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 6.1e-145 518.1 328 75.9
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 1.0e-144 517.3 399 66.4
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.4e-144 516.9 328 76.2
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 2.3e-144 516.2 331 74.9
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 2.3e-144 516.2 411 64.7
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 3.9e-144 515.4 407 68.3
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 5.2e-144 515.0 324 75.9
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 8.8e-144 514.2 418 63.9
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 1.5e-143 513.5 399 66.2
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 4.4e-143 511.9 403 65.3
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 9.7e-143 510.8 404 63.6
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.3e-142 510.4 422 63.5
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 1.3e-142 510.4 409 64.8
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 1.7e-142 510.0 404 63.9
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 2.8e-142 509.2 404 65.3
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 4.8e-142 508.4 324 74.1
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 6.3e-142 508.1 403 64.8
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 8.2e-142 507.7 324 74.1
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 8.2e-142 507.7 335 71.0
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 1.4e-141 506.9 401 66.8
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.1e-141 505.8 312 76.0
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 9.1e-141 504.2 406 65.8
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 1.6e-140 503.4 403 64.0
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 2.6e-140 502.7 407 66.6
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 3.5e-140 502.3 409 65.0
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 4.5e-140 501.9 403 64.5
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.7e-139 500.0 399 65.4
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 2.2e-139 499.6 313 75.4
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 3.8e-139 498.8 325 71.4
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 3.8e-139 498.8 405 64.7
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 3.8e-139 498.8 410 64.4
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 6.5e-139 498.0 406 66.5
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 8.5e-139 497.7 310 75.8
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 1.9e-138 496.5 402 64.7
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 1.6e-137 493.4 405 66.2
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 6.1e-137 491.5 402 62.7
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 1.0e-136 490.7 406 64.5
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 1.8e-136 490.0 412 62.6
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 2.3e-136 489.6 382 66.5
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 2.3e-136 489.6 368 67.7
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 5.7e-135 485.0 434 58.5
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 5.7e-135 485.0 323 73.7
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 9.8e-135 484.2 365 66.6
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 2.8e-134 482.6 399 62.7
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 3.7e-134 482.3 392 63.3
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 6.3e-134 481.5 398 63.1
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 8.3e-134 481.1 367 65.4
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 5.4e-133 478.4 390 62.6
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 5.4e-133 478.4 331 69.5
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 7.0e-133 478.0 330 70.6
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 2.0e-132 476.5 330 70.0
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 5.9e-132 474.9 391 60.9
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 7.7e-132 474.6 403 60.8
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 1.0e-131 474.2 392 62.0
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 1.3e-131 473.8 392 62.0
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 1.3e-131 473.8 392 61.2
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.7e-131 473.4 395 61.3
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 3.8e-131 472.2 390 62.3
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 8.5e-131 471.1 398 60.3
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 5.5e-130 468.4 390 61.8
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 2.2e-126 456.4 323 66.3
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.0e-123 447.6 292 70.2
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 2.9e-123 446.0 316 69.0
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 4.2e-122 442.2 400 56.2
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 9.5e-122 441.0 286 72.4
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 2.0e-119 433.3 342 64.9
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 3.4e-111 406.0 307 65.1
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 1.9e-109 400.2 337 63.5
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 3.5e-108 396.0 416 52.2
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 6.8e-104 381.7 249 71.9
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 5.4e-101 372.1 299 66.9
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 4.6e-100 369.0 370 50.8
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 5.2e-96 355.5 337 52.8
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 8.6e-91 338.2 310 52.6
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.1e-90 337.8 310 52.9
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 3.8e-46 189.9 404 36.4
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.8e-41 173.7 99 78.8
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 4.2e-37 159.8 94 76.6
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 3.3e-26 123.6 144 50.7
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 3.7e-25 120.2 65 81.5
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 6.3e-25 119.4 77 68.8
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 6.8e-19 99.4 267 29.2
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.0e-18 97.8 49 91.8
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 2.7e-15 87.4 53 75.5
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 2.9e-14 84.0 129 47.3
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 3.6e-12 77.0 128 37.5


User provided reference genes

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