Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29434 Davidia involucrata HOM05D001970 ORTHO05D006581 1.9e-59 232.3 115 100.0
Phvul.005G126400 Phaseolus vulgaris HOM05D001970 ORTHO05D006581 7.2e-14 80.9 105 41.9
DCAR_012170 Daucus carota HOM05D001970 ORTHO05D006581 1.2e-13 80.1 97 42.3
QL01p013573 Quercus lobata HOM05D001970 ORTHO05D006581 1.2e-13 80.1 97 43.3
Lalb_Chr24g0395181 Lupinus albus HOM05D001970 ORTHO05D006581 1.6e-13 79.7 105 40.0
VMungo1080G0720 Vigna mungo HOM05D001970 ORTHO05D006581 2.7e-13 79.0 105 41.0
Sc12g0004240 Simmondsia chinensis HOM05D001970 ORTHO05D006581 3.6e-13 78.6 101 39.6
CiPaw.13G140300 Carya illinoinensis HOM05D001970 ORTHO05D006581 4.6e-13 78.2 105 41.0
Medtr2g084985 Medicago truncatula HOM05D001970 ORTHO05D006581 4.6e-13 78.2 101 39.6
arahy.Tifrunner.gnm1.ann1.4XXP0Y Arachis hypogaea HOM05D001970 ORTHO05D006581 6.1e-13 77.8 101 39.6
Oeu051618.1 Olea europaea HOM05D001970 ORTHO05D006581 6.1e-13 77.8 101 42.6
SalBow3G0645 Salvia bowleyana HOM05D001970 ORTHO05D006581 6.1e-13 77.8 101 41.6
TWI75G0459 Tripterygium wilfordii HOM05D001970 ORTHO05D006581 6.1e-13 77.8 101 38.6
TAR636G2116 Trochodendron aralioides HOM05D001970 ORTHO05D006581 6.1e-13 77.8 105 41.9
Actinidia07215 Actinidia chinensis HOM05D001970 ORTHO05D006581 7.9e-13 77.4 95 42.1
Oeu048489.1 Olea europaea HOM05D001970 ORTHO05D006581 7.9e-13 77.4 101 41.6
Ah.01g004530 Amaranthus hybridus HOM05D001970 ORTHO05D006581 1.0e-12 77.0 108 38.0
CSS0025337 Camellia sinensis var. sinensis HOM05D001970 ORTHO05D006581 1.0e-12 77.0 97 43.3
Lj3g0026796 Lotus japonicus HOM05D001970 ORTHO05D006581 1.0e-12 77.0 101 38.6
Psat5g255760 Pisum sativum HOM05D001970 ORTHO05D006581 1.4e-12 76.6 101 38.6
Ciclev10029614m.g Citrus clementina HOM05D001970 ORTHO05D006581 1.8e-12 76.3 95 41.1
Glyma.12G182300 Glycine max HOM05D001970 ORTHO05D006581 1.8e-12 76.3 105 40.0
Thecc.09G290500 Theobroma cacao HOM05D001970 ORTHO05D006581 1.8e-12 76.3 95 43.2
TAR633G0932 Trochodendron aralioides HOM05D001970 ORTHO05D006581 1.8e-12 76.3 105 41.0
Dinv12514 Davidia involucrata HOM05D001970 ORTHO05D006581 2.3e-12 75.9 101 38.6
Dinv29432 Davidia involucrata HOM05D001970 ORTHO05D006581 2.3e-12 75.9 105 41.9
Aqoxy4G02879 Aquilegia oxysepala HOM05D001970 ORTHO05D006581 3.0e-12 75.5 100 41.0
MSTRG.12357 Avicennia marina HOM05D001970 ORTHO05D006581 3.0e-12 75.5 97 41.2
Ca_01674_v3 Cicer arietinum L. HOM05D001970 ORTHO05D006581 3.0e-12 75.5 101 37.6
Glyma.13G318600 Glycine max HOM05D001970 ORTHO05D006581 3.0e-12 75.5 105 39.0
ECA248G3685 Erigeron canadensis HOM05D001970 ORTHO05D006581 3.9e-12 75.1 101 41.6
CANSAT54G1595 Cannabis sativa HOM05D001970 ORTHO05D006581 5.1e-12 74.7 101 38.6
Cc01_g09730 Coffea canephora HOM05D001970 ORTHO05D006581 5.1e-12 74.7 105 41.0
Hma1.2p1_0695F.1_g204430 Hydrangea macrophylla HOM05D001970 ORTHO05D006581 5.1e-12 74.7 101 39.6
Duzib168G1330 Durio zibethinus HOM05D001970 ORTHO05D006581 6.7e-12 74.3 95 41.1
PSO339G2368 Papaver somniferum HOM05D001970 ORTHO05D006581 6.7e-12 74.3 104 41.3
Lalb_Chr03g0027951 Lupinus albus HOM05D001970 ORTHO05D006581 8.8e-12 73.9 101 34.7
Potri.004G187500 Populus trichocarpa HOM05D001970 ORTHO05D006581 8.8e-12 73.9 96 43.8
Rhsim01G0207400 Rhododendron simsii HOM05D001970 ORTHO05D006581 8.8e-12 73.9 101 39.6
TWI31G0398 Tripterygium wilfordii HOM05D001970 ORTHO05D006581 8.8e-12 73.9 101 37.6
MSTRG.17724 Avicennia marina HOM05D001970 ORTHO05D006581 1.1e-11 73.6 105 39.0
Cfa010075 Carpinus fangiana HOM05D001970 ORTHO05D006581 1.1e-11 73.6 97 40.2
Duzib170G0409 Durio zibethinus HOM05D001970 ORTHO05D006581 1.1e-11 73.6 95 41.1
MBI17_g19801_MAGBIO Magnolia biondii HOM05D001970 ORTHO05D006581 1.5e-11 73.2 98 38.8
TPR.G32359 Trifolium pratense HOM05D001970 ORTHO05D006581 1.5e-11 73.2 101 37.6
PSO384G2868 Papaver somniferum HOM05D001970 ORTHO05D006581 2.0e-11 72.8 104 40.4
Peaxi162Scf00002g05423 Petunia axillaris HOM05D001970 ORTHO05D006581 2.0e-11 72.8 101 40.6
Potri.009G148100 Populus trichocarpa HOM05D001970 ORTHO05D006581 2.0e-11 72.8 100 40.0
MD03G1136000 Malus domestica HOM05D001970 ORTHO05D006581 2.5e-11 72.4 101 37.6
arahy.Tifrunner.gnm1.ann1.XX1T89 Arachis hypogaea HOM05D001970 ORTHO05D006581 3.3e-11 72.0 101 36.6
COL.COLO4_19307 Corchorus olitorius HOM05D001970 ORTHO05D006581 3.3e-11 72.0 95 41.1
Gorai.009G087900 Gossypium raimondii HOM05D001970 ORTHO05D006581 3.3e-11 72.0 95 40.0
Nitab4.5_0006089g0070 Nicotiana tabacum HOM05D001970 ORTHO05D006581 3.3e-11 72.0 101 41.6
Hund00766 Selenicereus undatus HOM05D001970 ORTHO05D006581 3.3e-11 72.0 103 36.9
ATR0820G029 Amborella trichopoda HOM05D001970 ORTHO05D006581 4.3e-11 71.6 94 38.3
Gohir.A05G083300 Gossypium hirsutum HOM05D001970 ORTHO05D006581 4.3e-11 71.6 95 40.0
Lsat_1_v5_gn_1_62140 Lactuca sativa HOM05D001970 ORTHO05D006581 4.3e-11 71.6 95 40.0
PGR119G0344 Punica granatum HOM05D001970 ORTHO05D006581 4.3e-11 71.6 95 40.0
Sabra04G0126300 Salix brachista HOM05D001970 ORTHO05D006581 4.3e-11 71.6 100 39.0
Atru.chr3.3363 Acer truncatum HOM05D001970 ORTHO05D006581 5.7e-11 71.2 102 37.3
Aa31LG1G13030 Aethionema arabicum HOM05D001970 ORTHO05D006581 5.7e-11 71.2 101 38.6
CDE04G2325 Ceratophyllum demersum HOM05D001970 ORTHO05D006581 5.7e-11 71.2 105 36.2
HanXRQChr11g0346641 Helianthus annuus HOM05D001970 ORTHO05D006581 5.7e-11 71.2 101 40.6
SGA_v2.0_scaffold83G26424 Striga asiatica HOM05D001970 ORTHO05D006581 5.7e-11 71.2 105 38.1
Eucgr.J00434 Eucalyptus grandis HOM05D001970 ORTHO05D006581 7.4e-11 70.9 101 40.6
MD11G1158500 Malus domestica HOM05D001970 ORTHO05D006581 7.4e-11 70.9 101 35.6
Nitab4.5_0011810g0030 Nicotiana tabacum HOM05D001970 ORTHO05D006581 7.4e-11 70.9 101 41.6
Hund07680 Selenicereus undatus HOM05D001970 ORTHO05D006581 7.4e-11 70.9 97 37.1
EL10Ac9g21094 Beta vulgaris HOM05D001970 ORTHO05D006581 9.7e-11 70.5 104 37.5
AUR62023923 Chenopodium quinoa HOM05D001970 ORTHO05D006581 9.7e-11 70.5 104 37.5
Glyma.12G086100 Glycine max HOM05D001970 ORTHO05D006581 9.7e-11 70.5 102 33.3
Migut.N02510 Erythranthe guttata HOM05D001970 ORTHO05D006581 1.3e-10 70.1 101 38.6
Glyma.11G188300 Glycine max HOM05D001970 ORTHO05D006581 1.3e-10 70.1 106 34.9
Prupe.6G120300 Prunus persica HOM05D001970 ORTHO05D006581 1.7e-10 69.7 101 36.6
PGR102G2963 Punica granatum HOM05D001970 ORTHO05D006581 1.7e-10 69.7 104 35.6
MELO3C004785.2 Cucumis melo HOM05D001970 ORTHO05D006581 2.2e-10 69.3 104 34.6
Gohir.D05G086300 Gossypium hirsutum HOM05D001970 ORTHO05D006581 2.8e-10 68.9 95 38.9
HanXRQChr01g0016781 Helianthus annuus HOM05D001970 ORTHO05D006581 2.8e-10 68.9 101 37.6
Manes.11G158200 Manihot esculenta HOM05D001970 ORTHO05D006581 2.8e-10 68.9 101 35.6
FAN16G1916 Fragaria x ananassa HOM05D001970 ORTHO05D006581 4.8e-10 68.2 101 35.6
MELO3C021447.2 Cucumis melo HOM05D001970 ORTHO05D006581 6.3e-10 67.8 97 38.1
CsaV3_6G014780 Cucumis sativus L. HOM05D001970 ORTHO05D006581 6.3e-10 67.8 97 38.1
Glyma.01G075700 Glycine max HOM05D001970 ORTHO05D006581 6.3e-10 67.8 106 32.1
Phvul.011G091300 Phaseolus vulgaris HOM05D001970 ORTHO05D006581 6.3e-10 67.8 105 33.3
unitig_22.g5664 Utricularia gibba HOM05D001970 ORTHO05D006581 6.3e-10 67.8 101 36.6
Solyc11g066950.2 Solanum lycopersicum HOM05D001970 ORTHO05D006581 8.2e-10 67.4 97 39.2
TPR.G15579 Trifolium pratense HOM05D001970 ORTHO05D006581 8.2e-10 67.4 106 33.0
FvH4_3g29640 Fragaria vesca HOM05D001970 ORTHO05D006581 1.1e-09 67.0 101 34.7
FAN11G0699 Fragaria x ananassa HOM05D001970 ORTHO05D006581 1.1e-09 67.0 101 34.7
Sopen11g026670 Solanum pennellii HOM05D001970 ORTHO05D006581 1.1e-09 67.0 97 39.2
AUR62038317 Chenopodium quinoa HOM05D001970 ORTHO05D006581 1.4e-09 66.6 104 36.5
vmacro14360 Vaccinium macrocarpon HOM05D001970 ORTHO05D006581 1.4e-09 66.6 84 44.0
FAN25G0696 Fragaria x ananassa HOM05D001970 ORTHO05D006581 1.8e-09 66.2 101 34.7
Gohir.A08G003750 Gossypium hirsutum HOM05D001970 ORTHO05D006581 1.8e-09 66.2 95 37.9
Lalb_Chr19g0136721 Lupinus albus HOM05D001970 ORTHO05D006581 1.8e-09 66.2 101 32.7
Peaxi162Scf00002g00529 Petunia axillaris HOM05D001970 ORTHO05D006581 1.8e-09 66.2 97 35.1
THA.LOC104799538 Tarenaya hassleriana HOM05D001970 ORTHO05D006581 1.8e-09 66.2 101 36.6
CAN.G644.23 Capsicum annuum HOM05D001970 ORTHO05D006581 2.4e-09 65.9 101 36.6
ClCG01G012610 Citrullus lanatus HOM05D001970 ORTHO05D006581 2.4e-09 65.9 101 33.7
RcHm_v2.0_Chr5g0055001 Rosa chinensis HOM05D001970 ORTHO05D006581 2.4e-09 65.9 101 35.6
ClCG02G021950 Citrullus lanatus HOM05D001970 ORTHO05D006581 3.1e-09 65.5 97 37.1
Haze_23441 Corylus avellana HOM05D001970 ORTHO05D006581 3.1e-09 65.5 97 36.1
CsaV3_1G014560 Cucumis sativus L. HOM05D001970 ORTHO05D006581 3.1e-09 65.5 101 33.7
Glyma.13G008100 Glycine max HOM05D001970 ORTHO05D006581 3.1e-09 65.5 106 33.0
Gorai.004G008400 Gossypium raimondii HOM05D001970 ORTHO05D006581 3.1e-09 65.5 101 35.6
Sed0013424 Sechium edule HOM05D001970 ORTHO05D006581 3.1e-09 65.5 97 35.1
AT5G22580 Arabidopsis thaliana HOM05D001970 ORTHO05D006581 4.1e-09 65.1 101 35.6
AL6G33610 Arabidopsis lyrata HOM05D001970 ORTHO05D006581 5.3e-09 64.7 101 35.6
CARHR190970 Cardamine hirsuta HOM05D001970 ORTHO05D006581 5.3e-09 64.7 101 35.6
Nn2g14038 Nelumbo nucifera HOM05D001970 ORTHO05D006581 5.3e-09 64.7 104 37.5
Peaxi162Scf00002g00534 Petunia axillaris HOM05D001970 ORTHO05D006581 5.3e-09 64.7 97 34.0
Sp6g22730 Schrenkiella parvula HOM05D001970 ORTHO05D006581 5.3e-09 64.7 101 34.7
BcaB08g36415 Brassica carinata HOM05D001970 ORTHO05D006581 6.9e-09 64.3 101 35.6
Psat7g190320 Pisum sativum HOM05D001970 ORTHO05D006581 6.9e-09 64.3 106 33.0
THA.LOC104810906 Tarenaya hassleriana HOM05D001970 ORTHO05D006581 6.9e-09 64.3 101 34.7
BcaC04g19590 Brassica carinata HOM05D001970 ORTHO05D006581 9.1e-09 63.9 101 35.6
C09p53960 Brassica napus HOM05D001970 ORTHO05D006581 9.1e-09 63.9 101 35.6
BolC9t58268H Brassica oleracea HOM05D001970 ORTHO05D006581 9.1e-09 63.9 101 35.6
Carub.0006s2032 Capsella rubella HOM05D001970 ORTHO05D006581 9.1e-09 63.9 101 35.6
Manes.04G007800 Manihot esculenta HOM05D001970 ORTHO05D006581 9.1e-09 63.9 101 30.7
arahy.Tifrunner.gnm1.ann1.7YIN5C Arachis hypogaea HOM05D001970 ORTHO05D006581 1.2e-08 63.5 101 33.7
arahy.Tifrunner.gnm1.ann1.86JG4M Arachis hypogaea HOM05D001970 ORTHO05D006581 1.2e-08 63.5 101 33.7
Gohir.D08G014100 Gossypium hirsutum HOM05D001970 ORTHO05D006581 1.2e-08 63.5 101 34.7
THA.LOC104800551 Tarenaya hassleriana HOM05D001970 ORTHO05D006581 1.5e-08 63.2 100 33.0
Ca_19379_v3 Cicer arietinum L. HOM05D001970 ORTHO05D006581 2.0e-08 62.8 105 33.3
Thhalv10015069m.g Eutrema salsugineum HOM05D001970 ORTHO05D006581 2.0e-08 62.8 101 33.7
A10p18300 Brassica napus HOM05D001970 ORTHO05D006581 2.6e-08 62.4 101 34.7
BraA10t43907Z Brassica rapa HOM05D001970 ORTHO05D006581 2.6e-08 62.4 101 34.7
Glyma.09G127900 Glycine max HOM05D001970 ORTHO05D006581 5.9e-08 61.2 106 32.1
Os11g0150400 Oryza sativa ssp. japonica HOM05D001970 ORTHO05D006581 5.9e-08 61.2 94 36.2
PGSC0003DMG400026540 Solanum tuberosum HOM05D001970 ORTHO05D006581 5.9e-08 61.2 101 35.6
CAN.G644.24 Capsicum annuum HOM05D001970 ORTHO05D006581 7.7e-08 60.8 101 34.7
C02p11030 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-07 60.5 101 33.7
BolC2t07174H Brassica oleracea HOM05D001970 ORTHO05D006581 1.0e-07 60.5 101 33.7
BraA02t05667Z Brassica rapa HOM05D001970 ORTHO05D006581 1.0e-07 60.5 101 33.7
Sed0015386 Sechium edule HOM05D001970 ORTHO05D006581 2.2e-07 59.3 101 32.7
Rhsim12G0094000 Rhododendron simsii HOM05D001970 ORTHO05D006581 6.5e-07 57.8 80 38.8
Sed0011225 Sechium edule HOM05D001970 ORTHO05D006581 4.2e-06 55.1 97 35.1
ATR1096G001 Amborella trichopoda HOM05D001970 ORTHO05D006581 9.4e-06 53.9 56 42.9


User provided reference genes

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