Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29430 Davidia involucrata HOM05D008128 ORTHO05D010259 1.6e-43 179.1 94 100.0
Duzib168G2012 Durio zibethinus HOM05D008128 ORTHO05D010259 1.3e-16 89.7 97 55.7
Dinv21251 Davidia involucrata HOM05D008128 ORTHO05D010259 4.8e-16 87.8 99 56.6
Gohir.A05G083600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 6.3e-16 87.4 101 55.4
Gohir.D05G086500 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.1e-15 86.7 101 54.5
Gorai.009G088100 Gossypium raimondii HOM05D008128 ORTHO05D010259 1.1e-15 86.7 101 53.5
PSO170G0300 Papaver somniferum HOM05D008128 ORTHO05D010259 1.1e-15 86.7 98 55.1
TWI31G0843 Tripterygium wilfordii HOM05D008128 ORTHO05D010259 1.1e-15 86.7 107 54.2
Manes.04G008100 Manihot esculenta HOM05D008128 ORTHO05D010259 2.4e-15 85.5 106 56.6
TAR633G0657 Trochodendron aralioides HOM05D008128 ORTHO05D010259 2.4e-15 85.5 89 58.4
PSO384G2376 Papaver somniferum HOM05D008128 ORTHO05D010259 9.0e-15 83.6 102 52.9
Nn6g35034 Nelumbo nucifera HOM05D008128 ORTHO05D010259 1.5e-14 82.8 99 54.5
Thecc.09G290900 Theobroma cacao HOM05D008128 ORTHO05D010259 2.0e-14 82.4 103 51.5
PSO443G0067 Papaver somniferum HOM05D008128 ORTHO05D010259 3.4e-14 81.6 103 52.4
Duzib170G0339 Durio zibethinus HOM05D008128 ORTHO05D010259 1.0e-13 80.1 105 49.5
PSO210G6229 Papaver somniferum HOM05D008128 ORTHO05D010259 1.0e-13 80.1 98 54.1
GSVIVG01031392001 Vitis vinifera HOM05D008128 ORTHO05D010259 1.3e-13 79.7 107 54.2
Manes.11G157800 Manihot esculenta HOM05D008128 ORTHO05D010259 1.7e-13 79.3 105 54.3
EL10Ac9g21090 Beta vulgaris HOM05D008128 ORTHO05D010259 3.8e-13 78.2 100 54.0
Prupe.6G119900 Prunus persica HOM05D008128 ORTHO05D010259 1.9e-12 75.9 94 52.1
BcaC02g10905 Brassica carinata HOM05D008128 ORTHO05D010259 5.5e-12 74.3 102 55.9
CiPaw.13G140600 Carya illinoinensis HOM05D008128 ORTHO05D010259 7.2e-12 73.9 99 46.5
Actinidia08433 Actinidia chinensis HOM05D008128 ORTHO05D010259 9.4e-12 73.6 94 54.3
MD11G1158100 Malus domestica HOM05D008128 ORTHO05D010259 9.4e-12 73.6 95 50.5
Potri.009G148400 Populus trichocarpa HOM05D008128 ORTHO05D010259 2.1e-11 72.4 96 51.0
CiPaw.14G103200 Carya illinoinensis HOM05D008128 ORTHO05D010259 2.7e-11 72.0 86 55.8
Gohir.A07G107600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 3.6e-11 71.6 94 46.8
A07p18370 Brassica napus HOM05D008128 ORTHO05D010259 4.6e-11 71.2 101 55.4
Cfa010077 Carpinus fangiana HOM05D008128 ORTHO05D010259 4.6e-11 71.2 104 46.2
CiPaw.05G064900 Carya illinoinensis HOM05D008128 ORTHO05D010259 6.1e-11 70.9 100 49.0
MD03G1135500 Malus domestica HOM05D008128 ORTHO05D010259 6.1e-11 70.9 95 50.5
BcaB06g28169 Brassica carinata HOM05D008128 ORTHO05D010259 1.0e-10 70.1 97 50.5
C04p56930 Brassica napus HOM05D008128 ORTHO05D010259 1.0e-10 70.1 97 51.5
Thhalv10017465m.g Eutrema salsugineum HOM05D008128 ORTHO05D010259 1.4e-10 69.7 104 51.0
BolC4t23880H Brassica oleracea HOM05D008128 ORTHO05D010259 1.8e-10 69.3 102 52.0
FvH4_3g24190 Fragaria vesca HOM05D008128 ORTHO05D010259 1.8e-10 69.3 96 44.8
BraA07t29553Z Brassica rapa HOM05D008128 ORTHO05D010259 2.3e-10 68.9 101 53.5
FAN25G2677 Fragaria x ananassa HOM05D008128 ORTHO05D010259 2.3e-10 68.9 94 44.7
FAN25G1097 Fragaria x ananassa HOM05D008128 ORTHO05D010259 3.0e-10 68.6 94 44.7
Sp4g10610 Schrenkiella parvula HOM05D008128 ORTHO05D010259 3.0e-10 68.6 105 48.6
AT2G27775 Arabidopsis thaliana HOM05D008128 ORTHO05D010259 5.1e-10 67.8 100 47.0
CARHR120480 Cardamine hirsuta HOM05D008128 ORTHO05D010259 6.7e-10 67.4 96 47.9
AL4G22520 Arabidopsis lyrata HOM05D008128 ORTHO05D010259 8.8e-10 67.0 100 47.0
BcaB02g10115 Brassica carinata HOM05D008128 ORTHO05D010259 1.5e-09 66.2 103 52.4
C04p23830 Brassica napus HOM05D008128 ORTHO05D010259 2.5e-09 65.5 102 50.0
RcHm_v2.0_Chr5g0043301 Rosa chinensis HOM05D008128 ORTHO05D010259 4.3e-09 64.7 100 44.0
Aa31LG5G8220 Aethionema arabicum HOM05D008128 ORTHO05D010259 9.7e-09 63.5 104 46.2
Atru.chr3.3366 Acer truncatum HOM05D008128 ORTHO05D010259 1.7e-08 62.8 85 44.7
Gorai.001G119900 Gossypium raimondii HOM05D008128 ORTHO05D010259 2.2e-08 62.4 94 41.5
QL01p013611 Quercus lobata HOM05D008128 ORTHO05D010259 2.8e-08 62.0 85 47.1
Actinidia05455 Actinidia chinensis HOM05D008128 ORTHO05D010259 4.8e-08 61.2 90 47.8
THA.LOC104826404 Tarenaya hassleriana HOM05D008128 ORTHO05D010259 6.3e-08 60.8 99 40.4
CDE08G1127 Ceratophyllum demersum HOM05D003185 ORTHO05D007711 8.2e-08 60.5 103 46.6
CANSAT54G0355 Cannabis sativa HOM05D008128 ORTHO05D010259 1.4e-07 59.7 92 45.7
A04p21130 Brassica napus HOM05D008128 ORTHO05D010259 2.4e-07 58.9 97 46.4
QL08p023218 Quercus lobata HOM05D008128 ORTHO05D010259 2.4e-07 58.9 94 47.9
Sabra09G0116800 Salix brachista HOM05D008128 ORTHO05D010259 4.1e-07 58.2 84 48.8
BcaC02g08229 Brassica carinata HOM05D008128 ORTHO05D010259 5.3e-07 57.8 97 46.4
Carub.0004s0853 Capsella rubella HOM05D008128 ORTHO05D010259 5.3e-07 57.8 99 44.4
FAN11G2911 Fragaria x ananassa HOM05D008128 ORTHO05D010259 5.9e-06 54.3 85 41.2


User provided reference genes

Program Settings