Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 1.8e-293 1011.9 545 100.0
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.2e-193 679.5 495 73.1
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 1.9e-189 666.4 514 69.6
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 2.3e-179 632.9 510 65.9
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 2.2e-177 626.3 600 62.5
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 1.3e-174 617.1 514 66.5
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.2e-172 610.5 511 64.2
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 2.3e-171 606.3 516 63.2
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 2.2e-169 599.7 468 70.1
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 2.8e-169 599.4 510 64.1
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 8.6e-166 587.8 506 63.2
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 4.7e-164 582.0 511 60.1
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 2.6e-162 576.2 516 61.4
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 3.4e-162 575.9 512 61.9
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 9.8e-162 574.3 509 62.3
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 9.8e-162 574.3 507 62.5
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 1.4e-160 570.5 519 61.3
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 9.2e-160 567.8 511 61.3
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 1.0e-158 564.3 505 61.2
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 1.3e-158 563.9 468 66.5
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 8.6e-158 561.2 528 61.0
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.5e-157 559.7 443 68.6
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 6.1e-156 555.1 508 60.6
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 5.8e-154 548.5 513 58.7
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 1.7e-153 547.0 510 60.4
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 2.2e-153 546.6 516 58.7
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 2.9e-153 546.2 512 58.2
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 4.9e-153 545.4 509 59.7
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 8.3e-153 544.7 541 58.0
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 1.1e-152 544.3 514 59.7
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 1.9e-152 543.5 521 58.3
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 4.1e-152 542.3 529 57.8
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 7.0e-152 541.6 516 58.3
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 1.6e-151 540.4 507 57.8
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 3.5e-151 539.3 505 57.6
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 4.6e-151 538.9 509 58.3
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 1.7e-150 537.0 519 59.9
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 6.6e-150 535.0 508 59.1
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 8.6e-150 534.6 509 58.5
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.3e-149 532.3 513 59.5
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 4.3e-149 532.3 509 58.2
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.6e-148 530.4 511 59.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 2.1e-148 530.0 456 64.0
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 4.7e-148 528.9 509 58.7
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 1.8e-147 526.9 519 55.5
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 1.8e-147 526.9 506 57.3
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.1e-147 526.2 527 57.7
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 6.8e-147 525.0 470 60.4
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.0e-146 523.5 527 57.1
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 9.8e-146 521.2 528 56.6
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 4.9e-145 518.8 373 73.5
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 1.1e-144 517.7 556 54.0
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 1.4e-144 517.3 517 56.3
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 2.7e-143 513.1 511 56.0
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 7.8e-143 511.5 504 57.5
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 3.9e-142 509.2 516 55.2
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 2.5e-141 506.5 516 53.9
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 3.3e-141 506.1 518 54.6
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 3.3e-141 506.1 512 55.1
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 1.2e-140 504.2 571 52.0
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 1.6e-140 503.8 482 56.6
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 3.6e-140 502.7 526 55.1
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 3.1e-139 499.6 506 55.3
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 1.5e-138 497.3 516 53.3
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 5.8e-138 495.4 512 54.5
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 7.5e-138 495.0 499 54.9
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 9.9e-138 494.6 509 53.8
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 9.9e-138 494.6 504 54.4
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.1e-135 486.9 513 55.0
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 1.0e-134 484.6 510 53.9
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 5.1e-134 482.3 469 56.9
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 6.6e-134 481.9 501 55.5
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 1.9e-133 480.3 406 61.3
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 2.5e-133 479.9 562 50.0
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 9.5e-133 478.0 406 65.3
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 1.4e-131 474.2 497 56.7
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 4.0e-131 472.6 459 57.3
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 9.9e-130 468.0 527 51.6
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 4.9e-129 465.7 504 53.2
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 8.4e-129 464.9 497 53.7
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.2e-128 463.0 392 62.5
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.2e-128 463.0 392 62.5
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 1.0e-126 458.0 506 53.6
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 3.9e-126 456.1 506 53.6
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 8.7e-126 454.9 523 50.1
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 2.8e-124 449.9 509 52.5
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 1.1e-123 448.0 540 51.3
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 3.1e-123 446.4 353 68.3
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 1.1e-120 438.0 520 50.8
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 1.7e-105 387.5 559 43.1
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 1.4e-104 384.4 487 48.0
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 6.0e-103 379.0 429 50.6
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 3.3e-101 373.2 410 53.9
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.0e-89 335.1 364 51.9
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 6.5e-89 332.4 498 45.0
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.9e-88 330.9 529 41.0
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.1e-87 327.4 529 40.8
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 2.6e-74 283.9 511 38.9
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 2.7e-71 273.9 542 34.5
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 4.4e-69 266.5 512 35.9
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 1.8e-67 261.2 201 66.2
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 6.5e-65 252.7 376 42.6
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 2.7e-63 247.3 467 34.5
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 7.5e-61 239.2 329 41.6
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.4e-54 218.4 183 63.9
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 4.4e-53 213.4 251 51.0
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 8.3e-52 209.1 195 56.9
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 2.3e-49 201.1 210 58.1
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 6.6e-49 199.5 166 65.1
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 1.2e-45 188.7 213 51.2
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 4.5e-42 176.8 205 51.2
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 5.2e-30 136.7 184 42.9
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 8.3e-28 129.4 506 26.9
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 4.3e-24 117.1 87 69.0
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 1.8e-22 111.7 140 51.4
Haze_23483 Corylus avellana HOM05D006347 ORTHO05D007835 1.1e-14 85.9 128 43.0
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 5.8e-13 80.1 65 66.2
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 7.6e-13 79.7 159 34.6
Haze_23490 Corylus avellana HOM05D006347 ORTHO05D007835 1.4e-11 75.5 106 44.3
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.3e-09 68.9 62 62.9
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 1.7e-09 68.6 126 33.3
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 8.7e-09 66.2 70 47.1
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 4.0e-06 57.4 90 43.3


User provided reference genes

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