Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 3.0e-78 295.4 185 100.0
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 4.8e-52 208.4 176 74.4
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 6.7e-46 188.0 192 56.2
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 8.5e-41 171.0 180 64.4
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 1.6e-39 166.8 197 51.8
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 2.7e-39 166.0 118 67.8
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 1.4e-38 163.7 193 63.2
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 6.7e-38 161.4 116 65.5
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 9.7e-37 157.5 123 63.4
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 1.7e-36 156.8 183 54.6
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 2.2e-36 156.4 120 64.2
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 2.8e-36 156.0 188 46.3
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 3.7e-36 155.6 180 58.9
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 3.7e-36 155.6 180 58.3
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 6.3e-36 154.8 177 50.3
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 8.2e-36 154.5 181 50.3
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 1.4e-35 153.7 188 45.7
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 2.4e-35 152.9 180 52.8
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 3.1e-35 152.5 180 53.9
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 3.1e-35 152.5 187 48.1
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 3.1e-35 152.5 180 58.3
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 4.1e-35 152.1 185 48.6
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 5.3e-35 151.8 111 64.0
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 6.9e-35 151.4 115 60.9
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 9.1e-35 151.0 177 48.6
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 9.1e-35 151.0 185 47.6
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 1.2e-34 150.6 178 51.7
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 1.5e-34 150.2 180 53.3
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 2.6e-34 149.4 186 53.8
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 7.7e-34 147.9 185 47.0
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 7.7e-34 147.9 165 47.3
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 1.0e-33 147.5 182 59.3
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 1.3e-33 147.1 189 51.9
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 1.3e-33 147.1 179 52.0
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 3.8e-33 145.6 183 55.7
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 5.0e-33 145.2 179 50.8
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 1.4e-32 143.7 183 55.7
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 2.5e-32 142.9 183 55.7
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 2.5e-32 142.9 119 57.1
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 4.2e-32 142.1 122 57.4
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 4.2e-32 142.1 180 56.1
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 2.1e-31 139.8 119 59.7
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 2.7e-31 139.4 117 57.3
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 3.6e-31 139.0 120 60.0
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 4.7e-31 138.7 118 56.8
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 6.1e-31 138.3 124 60.5
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 6.1e-31 138.3 119 59.7
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 7.9e-31 137.9 112 56.2
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 1.4e-30 137.1 181 59.1
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 1.4e-30 137.1 118 58.5
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 1.8e-30 136.7 124 50.0
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 2.3e-30 136.3 181 51.9
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 3.9e-30 135.6 132 53.8
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 3.9e-30 135.6 182 55.5
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 8.8e-30 134.4 181 54.1
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 1.1e-29 134.0 114 53.5
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 1.5e-29 133.7 180 51.7
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 3.3e-29 132.5 181 43.6
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 4.4e-29 132.1 117 54.7
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 5.7e-29 131.7 108 56.5
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 7.4e-29 131.3 107 57.0
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 1.7e-28 130.2 129 51.9
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 3.7e-28 129.0 107 54.2
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 3.7e-28 129.0 107 56.1
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 3.7e-28 129.0 120 56.7
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 3.7e-28 129.0 118 57.6
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 1.4e-27 127.1 107 53.3
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 1.8e-27 126.7 117 59.0
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 5.3e-27 125.2 180 54.4
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 9.1e-27 124.4 110 55.5
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 1.2e-26 124.0 98 61.2
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 4.5e-26 122.1 180 50.6
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 7.7e-26 121.3 186 46.2
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 2.9e-25 119.4 121 51.2
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 1.1e-24 117.5 111 49.5
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 1.9e-24 116.7 120 43.3
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 1.2e-23 114.0 112 51.8
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 1.2e-23 114.0 119 48.7
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 2.1e-23 113.2 118 52.5
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 2.7e-23 112.8 107 52.3
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 8.0e-23 111.3 108 50.0
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 1.7e-20 103.6 204 39.7
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 8.2e-20 101.3 154 39.6
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 2.7e-18 96.3 120 43.3
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 2.2e-17 93.2 127 43.3


User provided reference genes

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