Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.3e-68 263.1 142 100.0
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 2.5e-53 212.2 99 100.0
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 2.5e-53 212.2 99 100.0
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 2.5e-53 212.2 99 100.0
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 2.5e-53 212.2 99 100.0
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 2.5e-53 212.2 99 100.0
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 2.5e-53 212.2 99 100.0
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-52 209.9 99 99.0
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-52 209.9 99 99.0
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-52 209.9 99 99.0
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-52 209.9 99 99.0
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 3.7e-52 208.4 99 99.0
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 4.8e-52 208.0 99 98.0
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 1.4e-51 206.5 103 94.2
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 1.8e-51 206.1 99 98.0
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 4.1e-51 204.9 99 97.0
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 4.1e-51 204.9 99 97.0
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 4.1e-51 204.9 99 97.0
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 6.9e-51 204.1 99 97.0
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 6.9e-51 204.1 95 98.9
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 6.9e-51 204.1 99 97.0
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 9.1e-51 203.8 99 97.0
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 9.1e-51 203.8 99 97.0
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 9.1e-51 203.8 99 97.0
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 9.1e-51 203.8 99 97.0
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 9.1e-51 203.8 99 97.0
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 9.1e-51 203.8 99 97.0
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 9.1e-51 203.8 99 96.0
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 9.1e-51 203.8 99 97.0
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 9.1e-51 203.8 99 97.0
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 9.1e-51 203.8 99 97.0
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.2e-50 203.4 109 88.1
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.5e-50 203.0 99 97.0
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.5e-50 203.0 99 97.0
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 2.0e-50 202.6 99 96.0
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 2.0e-50 202.6 98 96.9
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 2.0e-50 202.6 99 96.0
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 2.6e-50 202.2 97 97.9
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 2.6e-50 202.2 97 97.9
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 2.6e-50 202.2 99 96.0
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 3.4e-50 201.8 99 97.0
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 4.5e-50 201.4 97 96.9
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 1.7e-49 199.5 97 96.9
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 2.2e-49 199.1 99 94.9
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 5.0e-49 198.0 99 94.9
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 6.5e-49 197.6 99 94.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 8.5e-49 197.2 94 97.9
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 8.5e-49 197.2 94 97.9
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 8.5e-49 197.2 94 97.9
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 1.1e-48 196.8 96 95.8
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 1.1e-48 196.8 99 93.9
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.9e-48 196.1 96 94.8
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.9e-48 196.1 96 94.8
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-48 196.1 99 93.9
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.2e-47 193.4 99 92.9
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-47 193.4 99 92.9
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.7e-47 192.2 96 93.8
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-47 191.0 96 93.8
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-47 191.0 99 91.9
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-47 191.0 96 93.8
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 1.1e-45 186.8 87 98.9
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-45 185.7 99 88.9
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-45 185.7 99 88.9
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-45 185.3 99 88.9
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-45 184.9 99 88.9
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 5.7e-45 184.5 96 89.6
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 3.7e-44 181.8 102 83.3
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-44 181.0 99 86.9
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-44 180.6 93 90.3
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.1e-43 180.3 87 96.6
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.4e-43 179.9 99 86.9
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-43 177.9 96 87.5
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-42 176.0 99 84.8
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-42 175.3 95 87.4
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-42 174.9 99 85.9
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 2.9e-41 172.2 83 96.4
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 5.0e-41 171.4 79 98.7
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-40 170.2 96 85.4
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-40 168.7 94 86.2
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 9.4e-40 167.2 83 95.2
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-39 166.0 99 82.8
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 2.7e-39 165.6 77 97.4
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-39 165.2 97 83.5
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 3.9e-38 161.8 99 80.8
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 1.1e-37 160.2 82 91.5
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-37 157.9 80 90.0
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 7.4e-37 157.5 87 85.1
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 7.4e-37 157.5 87 85.1
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 8.2e-36 154.1 74 97.3
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 8.2e-36 154.1 74 97.3
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 1.4e-35 153.3 73 97.3
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 3.1e-35 152.1 73 95.9
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 3.1e-35 152.1 72 95.8
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 5.3e-35 151.4 74 95.9
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 5.3e-35 151.4 74 95.9
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 5.3e-35 151.4 74 95.9
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 5.3e-35 151.4 74 95.9
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-33 146.4 81 85.2
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 2.9e-33 145.6 71 94.4
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-33 145.2 74 90.5
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 5.5e-32 141.4 72 91.7
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 7.2e-32 141.0 74 89.2
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 9.4e-32 140.6 73 90.4
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-31 139.8 74 89.2
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-31 138.7 74 89.2
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-31 138.3 74 87.8
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-31 137.9 74 87.8
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.4e-30 136.7 74 86.5
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-30 136.3 70 90.0
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 2.3e-30 136.0 93 66.7
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-30 135.2 72 88.9
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-30 135.2 72 88.9
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-30 134.0 70 90.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-30 134.0 74 86.5
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 1.2e-29 133.7 99 71.7
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-29 133.7 73 87.7
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-29 132.1 72 86.1
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 5.7e-29 131.3 64 93.8
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-28 129.8 74 85.1
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-28 128.6 74 85.1
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.1e-27 127.1 94 60.6
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-27 127.1 71 85.9
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.4e-27 126.7 67 86.6
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-27 124.8 60 95.0
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 7.0e-27 124.4 74 82.4
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-25 119.4 62 90.3
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-25 117.9 59 91.5
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.5e-24 116.7 56 94.6
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.2e-23 113.6 96 57.3
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.1e-23 111.3 64 82.8
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.6e-18 96.7 72 68.1
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-18 95.1 52 86.5
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.3e-17 93.6 73 67.1
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-17 92.4 69 68.1
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-16 90.5 58 77.6
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.5e-16 90.1 50 84.0
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-16 89.7 63 74.6
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.0e-15 84.3 44 90.9
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 1.5e-13 80.1 37 97.3
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.6e-13 79.3 45 80.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-11 73.6 50 72.0
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 2.9e-09 65.9 34 85.3
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 5.0e-09 65.1 72 52.8
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-08 63.9 35 85.7
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-08 63.9 35 85.7
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 1.5e-08 63.5 35 82.9
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.9e-08 63.2 31 93.5
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 3.3e-08 62.4 30 93.3
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-07 60.5 34 82.4
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-07 58.2 29 89.7
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-06 55.1 37 73.0


User provided reference genes

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