Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29313 Davidia involucrata HOM05D003927 ORTHO05D004905 3.8e-60 234.6 112 100.0
Manes.03G074000 Manihot esculenta HOM05D003927 ORTHO05D004905 2.1e-58 228.8 109 100.0
Lj2A344G38 Lonicera japonica HOM05D003927 ORTHO05D004905 1.0e-57 226.5 109 98.2
Rhsim13G0129600 Rhododendron simsii HOM05D003927 ORTHO05D004905 1.0e-57 226.5 109 98.2
SalBow8G3138 Salvia bowleyana HOM05D003927 ORTHO05D004905 1.3e-57 226.1 109 98.2
RcHm_v2.0_Chr5g0020631 Rosa chinensis HOM05D003927 ORTHO05D004905 2.3e-57 225.3 109 97.2
Atru.chr10.419 Acer truncatum HOM05D003927 ORTHO05D004905 3.0e-57 224.9 109 97.2
CSS0033159 Camellia sinensis var. sinensis HOM05D003927 ORTHO05D004905 3.0e-57 224.9 109 97.2
MBI18_g31367_MAGBIO Magnolia biondii HOM05D003927 ORTHO05D004905 5.1e-57 224.2 109 97.2
Ciclev10014997m.g Citrus clementina HOM05D003927 ORTHO05D004905 6.7e-57 223.8 109 96.3
Prupe.4G115400 Prunus persica HOM05D003927 ORTHO05D004905 6.7e-57 223.8 110 96.4
CiPaw.09G074500 Carya illinoinensis HOM05D003927 ORTHO05D004905 8.7e-57 223.4 109 97.2
MD05G1248900 Malus domestica HOM05D003927 ORTHO05D004905 1.1e-56 223.0 109 96.3
ClCG01G025630 Citrullus lanatus HOM05D003927 ORTHO05D004905 1.5e-56 222.6 109 96.3
MELO3C007022.2 Cucumis melo HOM05D003927 ORTHO05D004905 1.5e-56 222.6 109 96.3
CsaV3_6G052860 Cucumis sativus L. HOM05D003927 ORTHO05D004905 1.5e-56 222.6 109 96.3
Cc00_g22880 Coffea canephora HOM05D003927 ORTHO05D004905 1.9e-56 222.2 109 96.3
Duzib248G0257 Durio zibethinus HOM05D003927 ORTHO05D004905 1.9e-56 222.2 109 96.3
Thecc.02G005900 Theobroma cacao HOM05D003927 ORTHO05D004905 1.9e-56 222.2 109 96.3
Cpa.g.sc30.136 Carica papaya HOM05D003927 ORTHO05D004905 2.5e-56 221.9 109 96.3
FvH4_3g12660 Fragaria vesca HOM05D003927 ORTHO05D004905 2.5e-56 221.9 109 96.3
FAN16G1436 Fragaria x ananassa HOM05D003927 ORTHO05D004905 2.5e-56 221.9 109 96.3
FAN21G3157 Fragaria x ananassa HOM05D003927 ORTHO05D004905 2.5e-56 221.9 109 96.3
FAN25G3197 Fragaria x ananassa HOM05D003927 ORTHO05D004905 2.5e-56 221.9 109 96.3
Hma1.2p1_0510F.1_g168820 Hydrangea macrophylla HOM05D003927 ORTHO05D004905 2.5e-56 221.9 109 96.3
Peaxi162Scf00199g00517 Petunia axillaris HOM05D003927 ORTHO05D004905 2.5e-56 221.9 109 94.5
GSVIVG01012124001 Vitis vinifera HOM05D003927 ORTHO05D004905 2.5e-56 221.9 109 95.4
Lsat_1_v5_gn_2_61101 Lactuca sativa HOM05D003927 ORTHO05D004905 3.3e-56 221.5 109 96.3
MD10G1229400 Malus domestica HOM05D003927 ORTHO05D004905 3.3e-56 221.5 109 95.4
SGA_v2.0_scaffold638G53308 Striga asiatica HOM05D003927 ORTHO05D004905 3.3e-56 221.5 109 95.4
SGA_v2.0_scaffold77G25372 Striga asiatica HOM05D003927 ORTHO05D004905 3.3e-56 221.5 109 95.4
CAN.G149.2 Capsicum annuum HOM05D003927 ORTHO05D004905 5.6e-56 220.7 109 94.5
ECA238G4411 Erigeron canadensis HOM05D003927 ORTHO05D004905 7.4e-56 220.3 109 95.4
Thhalv10007394m.g Eutrema salsugineum HOM05D003927 ORTHO05D004905 7.4e-56 220.3 109 95.4
Gohir.D12G047200 Gossypium hirsutum HOM05D003927 ORTHO05D004905 7.4e-56 220.3 109 94.5
Gorai.008G049800 Gossypium raimondii HOM05D003927 ORTHO05D004905 7.4e-56 220.3 109 94.5
COL.COLO4_17634 Corchorus olitorius HOM05D003927 ORTHO05D004905 9.6e-56 219.9 109 95.4
Haze_06142 Corylus avellana HOM05D003927 ORTHO05D004905 9.6e-56 219.9 109 96.3
Eucgr.E04308 Eucalyptus grandis HOM05D003927 ORTHO05D004905 9.6e-56 219.9 109 95.4
QL11p013470 Quercus lobata HOM05D003927 ORTHO05D004905 9.6e-56 219.9 108 95.4
Actinidia22422 Actinidia chinensis HOM05D003927 ORTHO05D004905 1.3e-55 219.5 107 97.2
DCAR_003771 Daucus carota HOM05D003927 ORTHO05D004905 1.3e-55 219.5 109 94.5
HanXRQChr14g0440241 Helianthus annuus HOM05D003927 ORTHO05D004905 1.3e-55 219.5 109 95.4
Solyc02g068530.4 Solanum lycopersicum HOM05D003927 ORTHO05D004905 1.3e-55 219.5 109 93.6
Sopen02g017670 Solanum pennellii HOM05D003927 ORTHO05D004905 1.3e-55 219.5 109 93.6
PGSC0003DMG400010448 Solanum tuberosum HOM05D003927 ORTHO05D004905 1.3e-55 219.5 109 93.6
Potri.001G159700 Populus trichocarpa HOM05D003927 ORTHO05D004905 1.6e-55 219.2 109 95.4
Sabra01G0132300 Salix brachista HOM05D003927 ORTHO05D004905 1.6e-55 219.2 109 95.4
TWI38G0647 Tripterygium wilfordii HOM05D003927 ORTHO05D004905 1.6e-55 219.2 109 95.4
AL1G45460 Arabidopsis lyrata HOM05D003927 ORTHO05D004905 2.1e-55 218.8 109 94.5
Carub.0001s2946 Capsella rubella HOM05D003927 ORTHO05D004905 2.1e-55 218.8 109 94.5
CARHR030580 Cardamine hirsuta HOM05D003927 ORTHO05D004905 2.1e-55 218.8 109 94.5
CARHR129180 Cardamine hirsuta HOM05D003927 ORTHO05D004905 2.1e-55 218.8 109 94.5
Cfa000676 Carpinus fangiana HOM05D003927 ORTHO05D004905 2.1e-55 218.8 109 95.4
Glyma.08G086700 Glycine max HOM05D003927 ORTHO05D004905 2.1e-55 218.8 109 95.4
Potri.003G074700 Populus trichocarpa HOM05D003927 ORTHO05D004905 2.1e-55 218.8 109 95.4
AL4G31040 Arabidopsis lyrata HOM05D003927 ORTHO05D004905 2.8e-55 218.4 109 94.5
BcaC07g37780 Brassica carinata HOM05D003927 ORTHO05D004905 3.7e-55 218.0 109 94.5
A08p10790 Brassica napus HOM05D003927 ORTHO05D004905 3.7e-55 218.0 109 94.5
BolC8t48168H Brassica oleracea HOM05D003927 ORTHO05D004905 3.7e-55 218.0 109 94.5
BraA08t33076Z Brassica rapa HOM05D003927 ORTHO05D004905 3.7e-55 218.0 109 94.5
Medtr4g094668 Medicago truncatula HOM05D003927 ORTHO05D004905 3.7e-55 218.0 109 93.6
Sp1g26910 Schrenkiella parvula HOM05D003927 ORTHO05D004905 3.7e-55 218.0 109 94.5
CANSAT64G2986 Cannabis sativa HOM05D003927 ORTHO05D004905 4.8e-55 217.6 109 94.5
Ca_18249_v3 Cicer arietinum L. HOM05D003927 ORTHO05D004905 4.8e-55 217.6 109 93.6
Oeu058944.1 Olea europaea HOM05D003927 ORTHO05D004905 4.8e-55 217.6 109 93.6
Phvul.002G190700 Phaseolus vulgaris HOM05D003927 ORTHO05D004905 4.8e-55 217.6 109 94.5
VMungo0251G3294 Vigna mungo HOM05D003927 ORTHO05D004905 4.8e-55 217.6 109 94.5
MSTRG.7601 Avicennia marina HOM05D003927 ORTHO05D004905 6.2e-55 217.2 107 94.4
Duzib132G1257 Durio zibethinus HOM05D003927 ORTHO05D004905 6.2e-55 217.2 109 93.6
Thhalv10016553m.g Eutrema salsugineum HOM05D003927 ORTHO05D004905 6.2e-55 217.2 109 94.5
Gohir.A12G048400 Gossypium hirsutum HOM05D003927 ORTHO05D004905 6.2e-55 217.2 109 93.6
Nn7g38278 Nelumbo nucifera HOM05D003927 ORTHO05D004905 6.2e-55 217.2 109 94.5
TWI15G0787 Tripterygium wilfordii HOM05D003927 ORTHO05D004905 6.2e-55 217.2 109 94.5
arahy.Tifrunner.gnm1.ann1.QMDN7F Arachis hypogaea HOM05D003927 ORTHO05D004905 8.2e-55 216.9 109 93.6
Gohir.A03G217900 Gossypium hirsutum HOM05D003927 ORTHO05D004905 8.2e-55 216.9 109 93.6
Lalb_Chr07g0188401 Lupinus albus HOM05D003927 ORTHO05D004905 8.2e-55 216.9 108 94.4
Sed0013384 Sechium edule HOM05D003927 ORTHO05D004905 8.2e-55 216.9 108 94.4
Aa31LG2G15040 Aethionema arabicum HOM05D003927 ORTHO05D004905 1.1e-54 216.5 109 93.6
SGA_v2.0_scaffold298G47698 Striga asiatica HOM05D003927 ORTHO05D004905 1.1e-54 216.5 106 96.2
arahy.Tifrunner.gnm1.ann1.YAS9I4 Arachis hypogaea HOM05D003927 ORTHO05D004905 1.8e-54 215.7 109 92.7
PGR042G2298 Punica granatum HOM05D003927 ORTHO05D004905 1.8e-54 215.7 109 92.7
Sabra03G0045400 Salix brachista HOM05D003927 ORTHO05D004905 1.8e-54 215.7 109 93.6
Lj4g0018518 Lotus japonicus HOM05D003927 ORTHO05D004905 2.4e-54 215.3 109 89.9
Aa31LG9G16190 Aethionema arabicum HOM05D003927 ORTHO05D004905 3.1e-54 214.9 109 92.7
AT2G35020 Arabidopsis thaliana HOM05D003927 ORTHO05D004905 3.1e-54 214.9 108 93.5
TPR.G2935 Trifolium pratense HOM05D003927 ORTHO05D004905 3.1e-54 214.9 109 89.0
BcaB04g18183 Brassica carinata HOM05D003927 ORTHO05D004905 4.0e-54 214.5 109 93.6
Aqoxy3G04338 Aquilegia oxysepala HOM05D003927 ORTHO05D004905 5.3e-54 214.2 109 93.6
THA.LOC104814353 Tarenaya hassleriana HOM05D003927 ORTHO05D004905 5.3e-54 214.2 110 90.9
EL10Ac7g16905 Beta vulgaris HOM05D003927 ORTHO05D004905 6.9e-54 213.8 109 91.7
BcaB02g09488 Brassica carinata HOM05D003927 ORTHO05D004905 1.2e-53 213.0 107 93.5
AUR62037029 Chenopodium quinoa HOM05D003927 ORTHO05D004905 1.2e-53 213.0 109 90.8
HanXRQChr15g0483481 Helianthus annuus HOM05D003927 ORTHO05D004905 1.2e-53 213.0 109 91.7
BcaC02g11582 Brassica carinata HOM05D003927 ORTHO05D004905 1.5e-53 212.6 107 93.5
BcaC05g27140 Brassica carinata HOM05D003927 ORTHO05D004905 1.5e-53 212.6 109 92.7
A05p10690 Brassica napus HOM05D003927 ORTHO05D004905 1.5e-53 212.6 107 93.5
A09p35130 Brassica napus HOM05D003927 ORTHO05D004905 1.5e-53 212.6 109 92.7
C04p13780 Brassica napus HOM05D003927 ORTHO05D004905 1.5e-53 212.6 107 93.5
C05p30260 Brassica napus HOM05D003927 ORTHO05D004905 1.5e-53 212.6 109 92.7
BolC4t22968H Brassica oleracea HOM05D003927 ORTHO05D004905 1.5e-53 212.6 107 93.5
BolC5t31766H Brassica oleracea HOM05D003927 ORTHO05D004905 1.5e-53 212.6 109 92.7
BraA05t20009Z Brassica rapa HOM05D003927 ORTHO05D004905 1.5e-53 212.6 107 93.5
CANSAT35G1049 Cannabis sativa HOM05D003927 ORTHO05D004905 1.5e-53 212.6 107 92.5
BraA09t39043Z Brassica rapa HOM05D003927 ORTHO05D004905 3.4e-53 211.5 109 91.7
Sp4g17300 Schrenkiella parvula HOM05D003927 ORTHO05D004905 4.5e-53 211.1 109 91.7
BcaB07g32771 Brassica carinata HOM05D003927 ORTHO05D004905 7.6e-53 210.3 108 92.6
AUR62006193 Chenopodium quinoa HOM05D003927 ORTHO05D004905 7.6e-53 210.3 109 89.0
Migut.M01998 Erythranthe guttata HOM05D003927 ORTHO05D004905 1.3e-52 209.5 109 89.9
Psat7g088440 Pisum sativum HOM05D003927 ORTHO05D004905 1.7e-52 209.1 109 89.9
SGA_v2.0_scaffold175G39352 Striga asiatica HOM05D003927 ORTHO05D004905 1.7e-52 209.1 103 95.1
PGR004G1431 Punica granatum HOM05D003927 ORTHO05D004905 2.2e-52 208.8 107 91.6
Carub.0004s1671 Capsella rubella HOM05D003927 ORTHO05D004905 3.8e-52 208.0 103 96.1
Gorai.005G268300 Gossypium raimondii HOM05D003927 ORTHO05D004905 4.9e-52 207.6 109 92.7
Ah.08g210510 Amaranthus hybridus HOM05D003927 ORTHO05D004905 8.4e-52 206.8 109 88.1
TAR626G0108 Trochodendron aralioides HOM05D003927 ORTHO05D004905 1.1e-51 206.5 109 90.8
PSO541G2426 Papaver somniferum HOM05D003927 ORTHO05D004905 1.9e-51 205.7 109 90.8
HPP92_016424 Vanilla planifolia HOM05D003927 ORTHO05D004905 3.2e-51 204.9 110 86.4
ATR0763G183 Amborella trichopoda HOM05D003927 ORTHO05D004905 4.2e-51 204.5 109 88.1
PSO675G6709 Papaver somniferum HOM05D003927 ORTHO05D004905 4.2e-51 204.5 109 89.9
THA.LOC104798559 Tarenaya hassleriana HOM05D003927 ORTHO05D004905 2.1e-50 202.2 109 89.0
CDE12G0287 Ceratophyllum demersum HOM05D003927 ORTHO05D004905 2.7e-50 201.8 109 87.2
HPP92_026366 Vanilla planifolia HOM05D003927 ORTHO05D004905 2.7e-50 201.8 108 87.0
Os08g0206900 Oryza sativa ssp. japonica HOM05D003927 ORTHO05D004905 1.3e-49 199.5 109 86.2
Zm00001eb070940 Zea mays HOM05D003927 ORTHO05D004905 5.1e-49 197.6 109 85.3
Zm00001eb430780 Zea mays HOM05D003927 ORTHO05D004905 5.1e-49 197.6 109 85.3
Hund12931 Selenicereus undatus HOM05D003927 ORTHO05D004905 2.5e-48 195.3 137 72.3
SEGI_30940 Sequoiadendron giganteum HOM05D003927 ORTHO05D004905 4.8e-47 191.0 106 83.0
HanXRQChr15g0483471 Helianthus annuus HOM05D003927 ORTHO05D004905 6.3e-47 190.7 127 75.6
Lj1C1147G9 Lonicera japonica HOM05D003927 ORTHO05D004905 3.2e-43 178.3 87 95.4
Nitab4.5_0006246g0020 Nicotiana tabacum HOM05D003927 ORTHO05D004905 9.3e-43 176.8 84 97.6
SMO351G0243 Selaginella moellendorffii HOM05D003927 ORTHO05D004905 6.1e-42 174.1 104 78.8
Zm00001eb413790 Zea mays HOM05D003927 ORTHO05D004905 1.3e-39 166.4 109 76.1
Dinv10533 Davidia involucrata HOM05D003927 ORTHO05D004905 2.0e-37 159.1 79 94.9
Glyma.05G132100 Glycine max HOM05D003927 ORTHO05D004905 1.9e-35 152.5 77 94.8
Gohir.D02G239900 Gossypium hirsutum HOM05D003927 ORTHO05D004905 2.5e-35 152.1 109 71.6
TAR624G0604 Trochodendron aralioides HOM05D003927 ORTHO05D004905 4.2e-35 151.4 80 92.5
TAR625G0767 Trochodendron aralioides HOM05D003927 ORTHO05D004905 1.2e-34 149.8 77 93.5
TAR628G0742 Trochodendron aralioides HOM05D003927 ORTHO05D004905 2.3e-33 145.6 76 92.1
SHI20747 Sapria himalayana HOM05D003927 ORTHO05D004905 1.5e-32 142.9 80 82.5
unitig_748.g7494 Utricularia gibba HOM05D003927 ORTHO05D004905 6.5e-28 127.5 65 93.8
Sp2g07060 Schrenkiella parvula HOM05D003281 ORTHO05D004128 3.3e-24 115.2 88 64.8
Nitab4.5_0000443g0090 Nicotiana tabacum HOM05D003927 ORTHO05D004905 9.1e-22 107.1 52 96.2
CBR_g45707 Chara braunii HOM05D003927 ORTHO05D004905 1.7e-20 102.8 106 50.9
Cre07.g345300 Chlamydomonas reinhardtii HOM05D003927 ORTHO05D004905 2.2e-20 102.4 102 55.9
Cfa023099 Carpinus fangiana HOM05D003927 ORTHO05D004905 5.7e-16 87.8 106 44.3
PRCOL_00005739 Prasinoderma coloniale HOM05D003927 ORTHO05D004905 7.5e-16 87.4 99 48.5
MCO02G083 Micromonas commoda HOM05D003927 ORTHO05D004905 7.0e-14 80.9 102 44.1
Atru.ctg1436.5 Acer truncatum HOM05D003927 ORTHO05D004905 2.3e-09 65.9 86 40.7
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 4.1e-06 55.1 54 57.4
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 5.4e-06 54.7 59 54.2


User provided reference genes

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