Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29214 Davidia involucrata HOM05D008618 ORTHO05D010393 6.8e-37 156.8 76 100.0
Hma1.2p1_0094F.1_g047330 Hydrangea macrophylla HOM05D008618 ORTHO05D010393 1.2e-25 119.4 73 75.3
Hma1.2p1_0094F.1_g047336 Hydrangea macrophylla HOM05D008618 ORTHO05D010393 1.2e-25 119.4 73 75.3
vmacro06440 Vaccinium macrocarpon HOM05D008618 ORTHO05D010393 1.1e-23 112.8 73 67.1
Haze_00293 Corylus avellana HOM05D008618 ORTHO05D010393 2.1e-22 108.6 73 68.5
Rhsim03G0215100 Rhododendron simsii HOM05D008618 ORTHO05D010393 2.8e-22 108.2 73 65.8
Cfa016164 Carpinus fangiana HOM05D008618 ORTHO05D010393 2.6e-20 101.7 73 64.4
QL09p007223 Quercus lobata HOM05D008618 ORTHO05D010393 9.9e-20 99.8 73 61.6
CiPaw.02G048200 Carya illinoinensis HOM05D008618 ORTHO05D010393 4.9e-19 97.4 74 62.2
CiPaw.06G041500 Carya illinoinensis HOM05D008618 ORTHO05D010393 4.1e-18 94.4 74 58.1
Actinidia34266 Actinidia chinensis HOM05D008618 ORTHO05D010393 7.1e-18 93.6 78 62.8
CSS0019591 Camellia sinensis var. sinensis HOM05D008618 ORTHO05D010393 7.1e-18 93.6 77 64.9
TAR629G1218 Trochodendron aralioides HOM05D008618 ORTHO05D010393 9.2e-18 93.2 75 64.0
TAR623G0439 Trochodendron aralioides HOM05D008618 ORTHO05D010393 2.7e-17 91.7 75 58.7
Oeu061027.1 Olea europaea HOM05D008618 ORTHO05D010393 6.0e-17 90.5 73 60.3
TAR623G0113 Trochodendron aralioides HOM05D008618 ORTHO05D010393 6.0e-17 90.5 75 57.3
Aqoxy7G00591 Aquilegia oxysepala HOM05D008618 ORTHO05D010393 2.3e-16 88.6 73 52.1
Thecc.03G208200 Theobroma cacao HOM05D008618 ORTHO05D010393 3.9e-16 87.8 74 55.4
Nn3g18880 Nelumbo nucifera HOM05D008618 ORTHO05D010393 3.3e-15 84.7 77 53.2
Sabra15G0003400 Salix brachista HOM05D008618 ORTHO05D010393 4.3e-15 84.3 73 54.8
RcHm_v2.0_Chr1g0382821 Rosa chinensis HOM05D008618 ORTHO05D010393 9.5e-15 83.2 77 53.2
Gohir.D12G247300 Gossypium hirsutum HOM05D008618 ORTHO05D010393 1.2e-14 82.8 74 54.1
Potri.012G021500 Populus trichocarpa HOM05D008618 ORTHO05D010393 1.2e-14 82.8 73 53.4
FvH4_7g32870 Fragaria vesca HOM05D008618 ORTHO05D010393 2.1e-14 82.0 75 56.0
FAN10G0741 Fragaria x ananassa HOM05D008618 ORTHO05D010393 2.1e-14 82.0 75 56.0
FAN10G2254 Fragaria x ananassa HOM05D008618 ORTHO05D010393 2.1e-14 82.0 75 56.0
Glyma.06G136100 Glycine max HOM05D008618 ORTHO05D010393 2.1e-14 82.0 73 53.4
MD07G1298600 Malus domestica HOM05D008618 ORTHO05D010393 2.8e-14 81.6 72 54.2
Manes.01G042900 Manihot esculenta HOM05D008618 ORTHO05D010393 2.8e-14 81.6 73 50.7
Gohir.A12G246600 Gossypium hirsutum HOM05D008618 ORTHO05D010393 4.7e-14 80.9 74 54.1
Gorai.008G265300 Gossypium raimondii HOM05D008618 ORTHO05D010393 4.7e-14 80.9 74 54.1
VMungo1309G1433 Vigna mungo HOM05D008618 ORTHO05D010393 1.8e-13 79.0 73 54.8
GSVIVG01038639001 Vitis vinifera HOM05D008618 ORTHO05D010393 1.2e-12 76.3 75 49.3
Lalb_Chr11g0067381 Lupinus albus HOM05D008618 ORTHO05D010393 2.6e-12 75.1 73 46.6
Glyma.04G228750 Glycine max HOM05D008618 ORTHO05D010393 5.8e-12 73.9 73 47.9
Medtr3g092635 Medicago truncatula HOM05D008618 ORTHO05D010393 1.3e-11 72.8 73 45.2
Phvul.009G045500 Phaseolus vulgaris HOM05D008618 ORTHO05D010393 1.7e-11 72.4 73 49.3
TPR.G33651 Trifolium pratense HOM05D012788 ORTHO05D010393 2.2e-11 72.0 74 48.6
SalBow2G1999 Salvia bowleyana HOM05D008618 ORTHO05D010393 6.4e-11 70.5 90 41.1
MBI12_g34834_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 5.4e-10 67.4 77 41.6
Gohir.A09G186833 Gossypium hirsutum HOM05D008618 ORTHO05D010393 1.6e-09 65.9 76 51.3
Psat5g072120 Pisum sativum HOM05D012788 ORTHO05D010393 1.6e-09 65.9 73 45.2
MBI12_g02805_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 2.7e-09 65.1 74 40.5
Gohir.D09G181766 Gossypium hirsutum HOM05D008618 ORTHO05D010393 3.5e-09 64.7 76 52.6
Gorai.006G203700 Gossypium raimondii HOM05D008618 ORTHO05D010393 3.5e-09 64.7 76 52.6
COL.COLO4_14366 Corchorus olitorius HOM05D008618 ORTHO05D010393 4.6e-09 64.3 74 48.6
MBI12_g34833_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 4.6e-09 64.3 74 40.5
Lj1g0016201 Lotus japonicus HOM05D012585 ORTHO05D015068 1.3e-08 62.8 70 48.6
arahy.Tifrunner.gnm1.ann1.G57NNM Arachis hypogaea HOM05D012788 ORTHO05D010393 3.9e-08 61.2 76 39.5
arahy.Tifrunner.gnm1.ann1.MVIT3T Arachis hypogaea HOM05D012788 ORTHO05D010393 3.9e-08 61.2 76 40.8
arahy.Tifrunner.gnm1.ann1.4T36ZR Arachis hypogaea HOM05D012788 ORTHO05D010393 8.7e-08 60.1 73 37.0
arahy.Tifrunner.gnm1.ann1.5C4YCE Arachis hypogaea HOM05D012788 ORTHO05D010393 8.7e-08 60.1 73 37.0
arahy.Tifrunner.gnm1.ann1.87KBHK Arachis hypogaea HOM05D012788 ORTHO05D010393 8.7e-08 60.1 73 37.0
arahy.Tifrunner.gnm1.ann1.9LPP9E Arachis hypogaea HOM05D012788 ORTHO05D010393 8.7e-08 60.1 73 37.0
arahy.Tifrunner.gnm1.ann1.B8BFDM Arachis hypogaea HOM05D012788 ORTHO05D010393 8.7e-08 60.1 73 37.0
arahy.Tifrunner.gnm1.ann1.FHB2RT Arachis hypogaea HOM05D012788 ORTHO05D010393 8.7e-08 60.1 73 37.0
arahy.Tifrunner.gnm1.ann1.M7I6G5 Arachis hypogaea HOM05D012788 ORTHO05D010393 8.7e-08 60.1 73 37.0
arahy.Tifrunner.gnm1.ann1.PIR49E Arachis hypogaea HOM05D012788 ORTHO05D010393 8.7e-08 60.1 73 37.0
arahy.Tifrunner.gnm1.ann1.XTE2M1 Arachis hypogaea HOM05D012788 ORTHO05D010393 8.7e-08 60.1 73 37.0
MBI12_g20135_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 2.8e-06 55.1 63 39.7
CDE09G1419 Ceratophyllum demersum HOM05D060668 ORTHO05D010393 3.6e-06 54.7 75 40.0


User provided reference genes

Program Settings