Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 2.1e-64 248.8 119 100.0
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 4.2e-57 224.6 119 89.9
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 1.3e-53 213.0 119 86.6
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 2.7e-48 195.3 121 77.7
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 4.6e-48 194.5 129 73.6
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.0e-47 193.4 130 74.6
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 4.3e-46 188.0 117 76.9
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 7.3e-46 187.2 120 75.0
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.8e-45 185.3 118 74.6
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 4.8e-45 184.5 136 69.9
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 8.1e-45 183.7 118 73.7
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 3.1e-44 181.8 117 76.9
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 1.5e-43 179.5 117 75.2
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 1.7e-42 176.0 117 72.6
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 7.1e-41 170.6 119 73.1
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 9.3e-41 170.2 111 76.6
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 1.2e-40 169.9 117 71.8
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 3.5e-40 168.3 117 69.2
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 4.6e-40 167.9 116 71.6
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 6.0e-40 167.5 119 70.6
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 1.8e-39 166.0 120 67.5
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 1.8e-39 166.0 112 74.1
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 1.8e-39 166.0 112 74.1
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 2.3e-39 165.6 108 74.1
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 3.0e-39 165.2 118 71.2
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 3.9e-39 164.9 106 74.5
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 3.9e-39 164.9 115 73.9
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 5.1e-39 164.5 106 75.5
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 1.5e-38 162.9 117 68.4
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.9e-38 162.5 106 79.2
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 3.3e-38 161.8 106 73.6
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 7.4e-38 160.6 102 77.5
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.6e-37 159.5 106 70.8
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 2.1e-37 159.1 102 76.5
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 2.1e-37 159.1 106 72.6
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 3.7e-37 158.3 107 75.7
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 6.2e-37 157.5 106 70.8
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 6.2e-37 157.5 102 76.5
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 6.2e-37 157.5 102 76.5
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 8.1e-37 157.1 106 74.5
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 1.1e-36 156.8 102 74.5
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 1.1e-36 156.8 106 76.4
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.4e-36 156.4 106 74.5
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 1.8e-36 156.0 112 67.9
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 1.8e-36 156.0 112 67.9
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 2.4e-36 155.6 112 67.9
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 2.4e-36 155.6 112 67.9
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 2.4e-36 155.6 113 69.0
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 2.4e-36 155.6 113 67.3
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 3.1e-36 155.2 108 73.1
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 5.3e-36 154.5 102 74.5
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 5.3e-36 154.5 107 73.8
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 6.9e-36 154.1 112 67.0
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.5e-35 152.9 106 70.8
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 2.0e-35 152.5 112 66.1
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.0e-35 152.5 117 68.4
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 2.6e-35 152.1 172 51.7
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 3.4e-35 151.8 76 92.1
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 3.4e-35 151.8 102 72.5
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 4.5e-35 151.4 113 66.4
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 4.5e-35 151.4 117 64.1
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 4.5e-35 151.4 114 64.9
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 5.8e-35 151.0 107 69.2
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 5.8e-35 151.0 106 68.9
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 7.6e-35 150.6 107 72.9
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 7.6e-35 150.6 106 70.8
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 1.0e-34 150.2 106 70.8
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 1.3e-34 149.8 106 70.8
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 1.3e-34 149.8 106 68.9
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.7e-34 149.4 104 70.2
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 2.2e-34 149.1 107 72.0
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 2.2e-34 149.1 106 69.8
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 2.2e-34 149.1 106 71.7
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 2.2e-34 149.1 106 71.7
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 2.9e-34 148.7 113 64.6
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 2.9e-34 148.7 113 64.6
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 3.8e-34 148.3 106 69.8
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 3.8e-34 148.3 109 69.7
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 3.8e-34 148.3 105 70.5
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 4.9e-34 147.9 112 69.6
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 4.9e-34 147.9 105 71.4
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 6.5e-34 147.5 112 66.1
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 6.5e-34 147.5 109 71.6
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 8.4e-34 147.1 114 63.2
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 8.4e-34 147.1 113 63.7
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 8.4e-34 147.1 114 63.2
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 8.4e-34 147.1 114 68.4
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 1.4e-33 146.4 76 86.8
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 1.4e-33 146.4 114 67.5
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 1.9e-33 146.0 106 67.9
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 1.9e-33 146.0 117 65.8
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 2.5e-33 145.6 106 68.9
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 2.5e-33 145.6 107 68.2
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 4.2e-33 144.8 94 73.4
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 5.5e-33 144.4 107 70.1
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 7.9e-32 140.6 85 81.2
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 3.0e-31 138.7 68 92.6
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 3.3e-30 135.2 103 67.0
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.3e-29 133.3 67 92.5
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 1.2e-27 126.7 93 64.5
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 2.0e-27 125.9 67 85.1
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 5.8e-27 124.4 107 57.0
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.7e-26 122.9 78 73.1
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 2.9e-26 122.1 76 69.7
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 8.4e-26 120.6 76 75.0
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 1.1e-25 120.2 64 85.9
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.1e-25 120.2 66 84.8
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 1.4e-25 119.8 79 65.8
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 4.2e-25 118.2 76 71.1
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 9.3e-25 117.1 98 64.3
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 3.5e-24 115.2 73 69.9
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 2.8e-21 105.5 95 56.8
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 4.5e-19 98.2 69 69.6
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 9.4e-17 90.5 99 50.5
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 4.6e-16 88.2 99 51.5
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.0e-15 87.0 66 71.2
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 5.7e-14 81.3 71 67.6
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 3.1e-12 75.5 64 56.2
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 1.8e-07 59.7 36 69.4


User provided reference genes

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