Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29148 Davidia involucrata HOM05D000123 ORTHO05D000064 1.1e-54 216.9 148 100.0
Dinv17251 Davidia involucrata HOM05D000123 ORTHO05D000064 5.4e-30 134.8 132 57.6
Hma1.2p1_0649F.1_g195280 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 1.6e-21 106.7 131 46.6
Oeu038090.1 Olea europaea HOM05D000123 ORTHO05D000064 2.8e-18 95.9 130 45.4
Lj3P886T13 Lonicera japonica HOM05D000123 ORTHO05D000064 3.1e-17 92.4 136 42.6
TAR629G2768 Trochodendron aralioides HOM05D000123 ORTHO05D000064 6.8e-17 91.3 132 42.4
QL09p023265 Quercus lobata HOM05D000123 ORTHO05D000064 3.4e-16 89.0 131 39.7
Rhsim09G0213400 Rhododendron simsii HOM05D000123 ORTHO05D000064 7.5e-16 87.8 131 38.9
TAR636G2714 Trochodendron aralioides HOM05D000123 ORTHO05D000064 7.5e-16 87.8 128 41.4
Oeu060393.1 Olea europaea HOM05D000123 ORTHO05D000064 1.3e-15 87.0 131 42.0
CiPaw.05G216400 Carya illinoinensis HOM05D000123 ORTHO05D000064 2.9e-15 85.9 141 40.4
CiPaw.06G034100 Carya illinoinensis HOM05D000123 ORTHO05D000064 1.9e-14 83.2 131 38.2
Thecc.05G215600 Theobroma cacao HOM05D000123 ORTHO05D000064 7.1e-14 81.3 132 38.6
vmacro22181 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 9.2e-14 80.9 131 36.6
Duzib177G0888 Durio zibethinus HOM05D000123 ORTHO05D000064 1.6e-13 80.1 132 37.9
Gohir.D08G241700 Gossypium hirsutum HOM05D000123 ORTHO05D000064 2.7e-13 79.3 132 37.1
Prupe.4G144200 Prunus persica HOM05D000123 ORTHO05D000064 3.5e-13 79.0 132 37.9
TAR375G0729 Trochodendron aralioides HOM05D000123 ORTHO05D000064 1.0e-12 77.4 130 39.2
Gorai.004G257000 Gossypium raimondii HOM05D000123 ORTHO05D000064 1.7e-12 76.6 132 36.4
Gohir.A08G221668 Gossypium hirsutum HOM05D000123 ORTHO05D000064 3.0e-12 75.9 132 36.4
Nn1g00179 Nelumbo nucifera HOM05D000123 ORTHO05D000064 3.0e-12 75.9 120 36.7
Sc19g0000110 Simmondsia chinensis HOM05D000123 ORTHO05D000064 1.5e-11 73.6 123 34.1
MSTRG.26926 Avicennia marina HOM05D000123 ORTHO05D000064 3.3e-11 72.4 138 35.5
Peaxi162Scf00516g00645 Petunia axillaris HOM05D000123 ORTHO05D000064 7.3e-11 71.2 119 36.1
Duzib128G1979 Durio zibethinus HOM05D000123 ORTHO05D000064 9.5e-11 70.9 132 34.8
Haze_00400 Corylus avellana HOM05D000123 ORTHO05D000064 1.2e-10 70.5 131 33.6
Atru.chr12.1879 Acer truncatum HOM05D000123 ORTHO05D000064 1.6e-10 70.1 131 35.9
Peaxi162Scf00815g00357 Petunia axillaris HOM05D000123 ORTHO05D000064 3.6e-10 68.9 128 34.4
COL.COLO4_15231 Corchorus olitorius HOM05D000123 ORTHO05D000064 4.7e-10 68.6 116 36.2
Eucgr.A02976 Eucalyptus grandis HOM05D000123 ORTHO05D000064 4.7e-10 68.6 124 33.9
MD10G1197700 Malus domestica HOM05D000123 ORTHO05D000064 8.1e-10 67.8 131 33.6
Sabra13G0073100 Salix brachista HOM05D000123 ORTHO05D000064 1.1e-09 67.4 122 32.8
Duzib106G0329 Durio zibethinus HOM05D000123 ORTHO05D000064 1.4e-09 67.0 132 33.3
CSS0047215 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 1.8e-09 66.6 57 57.9
Nitab4.5_0000645g0120 Nicotiana tabacum HOM05D000123 ORTHO05D000064 1.8e-09 66.6 115 33.9
Potri.013G079800 Populus trichocarpa HOM05D000123 ORTHO05D000064 2.4e-09 66.2 122 32.8
AUR62028193 Chenopodium quinoa HOM05D000123 ORTHO05D000064 4.0e-09 65.5 131 30.5
Gohir.A13G156700 Gossypium hirsutum HOM05D000123 ORTHO05D000064 5.2e-09 65.1 124 35.5
PGSC0003DMG400003160 Solanum tuberosum HOM05D000123 ORTHO05D000064 5.2e-09 65.1 124 33.1
PGSC0003DMG400027036 Solanum tuberosum HOM05D000123 ORTHO05D000064 5.2e-09 65.1 130 33.8
MD05G1213800 Malus domestica HOM05D000123 ORTHO05D000064 6.8e-09 64.7 129 34.1
Nitab4.5_0000021g0670 Nicotiana tabacum HOM05D000123 ORTHO05D000064 6.8e-09 64.7 116 34.5
CAN.G1131.21 Capsicum annuum HOM05D000123 ORTHO05D000064 8.9e-09 64.3 121 33.9
Gorai.013G183500 Gossypium raimondii HOM05D000123 ORTHO05D000064 8.9e-09 64.3 124 34.7
Cfa016045 Carpinus fangiana HOM05D000123 ORTHO05D000064 1.5e-08 63.5 131 32.1
Nitab4.5_0002998g0060 Nicotiana tabacum HOM05D000123 ORTHO05D000064 2.0e-08 63.2 115 33.0
AUR62002076 Chenopodium quinoa HOM05D000123 ORTHO05D000064 2.6e-08 62.8 131 29.0
Gohir.A02G141200 Gossypium hirsutum HOM05D000123 ORTHO05D000064 5.8e-08 61.6 118 32.2
Gohir.D03G051700 Gossypium hirsutum HOM05D000123 ORTHO05D000064 5.8e-08 61.6 118 32.2
Gohir.D13G161500 Gossypium hirsutum HOM05D000123 ORTHO05D000064 7.6e-08 61.2 124 33.9
Gorai.003G053300 Gossypium raimondii HOM05D000123 ORTHO05D000064 7.6e-08 61.2 118 31.4
Manes.09G127300 Manihot esculenta HOM05D000123 ORTHO05D000064 7.6e-08 61.2 124 33.1
Solyc06g072750.3 Solanum lycopersicum HOM05D000123 ORTHO05D000064 7.6e-08 61.2 121 31.4
Ciclev10020928m.g Citrus clementina HOM05D000123 ORTHO05D000064 9.9e-08 60.8 130 33.8
Nitab4.5_0001762g0010 Nicotiana tabacum HOM05D000123 ORTHO05D000064 1.3e-07 60.5 116 32.8
Sopen06g029130 Solanum pennellii HOM05D000123 ORTHO05D000064 1.3e-07 60.5 121 31.4
SGA_v2.0_scaffold44G16900 Striga asiatica HOM05D000123 ORTHO05D000064 1.3e-07 60.5 113 36.3
Solyc03g097120.3 Solanum lycopersicum HOM05D000123 ORTHO05D000064 2.2e-07 59.7 118 33.9
EL10Ac3g05062 Beta vulgaris HOM05D000123 ORTHO05D000064 3.8e-07 58.9 130 29.2
Sopen03g027860 Solanum pennellii HOM05D000123 ORTHO05D000064 3.8e-07 58.9 124 33.1
Cpa.g.sc43.94 Carica papaya HOM05D000123 ORTHO05D000064 1.1e-06 57.4 121 33.1
Lj3g0023839 Lotus japonicus HOM05D000123 ORTHO05D000064 7.1e-06 54.7 127 29.1
Hund09799 Selenicereus undatus HOM05D000123 ORTHO05D000064 9.2e-06 54.3 126 27.8


User provided reference genes

Program Settings