Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29140 Davidia involucrata HOM05D008311 ORTHO05D010526 1.5e-237 825.9 442 100.0
GSVIVG01024350001 Vitis vinifera HOM05D008311 ORTHO05D010526 1.0e-172 610.5 431 75.2
TAR629G0038 Trochodendron aralioides HOM05D008311 ORTHO05D010526 2.7e-170 602.4 395 76.7
Actinidia08755 Actinidia chinensis HOM05D008311 ORTHO05D010526 1.3e-164 583.6 396 76.3
Cfa016060 Carpinus fangiana HOM05D008311 ORTHO05D010526 3.9e-161 572.0 436 71.6
Thecc.05G218800 Theobroma cacao HOM05D008311 ORTHO05D010526 4.4e-160 568.5 434 70.3
Nn3g20131 Nelumbo nucifera HOM05D008311 ORTHO05D010526 3.7e-159 565.5 430 68.1
Aqoxy4G02584 Aquilegia oxysepala HOM05D008311 ORTHO05D010526 1.4e-158 563.5 431 68.4
Haze_00388 Corylus avellana HOM05D008311 ORTHO05D010526 1.2e-157 560.5 390 75.4
QL09p022981 Quercus lobata HOM05D008311 ORTHO05D010526 1.4e-153 547.0 517 61.5
CiPaw.05G215000 Carya illinoinensis HOM05D008311 ORTHO05D010526 1.5e-147 526.9 354 77.1
Gohir.A08G221662 Gossypium hirsutum HOM05D008311 ORTHO05D010526 5.7e-144 515.0 396 70.5
vmacro06529 Vaccinium macrocarpon HOM05D008311 ORTHO05D010526 4.8e-143 511.9 417 66.2
Ciclev10020460m.g Citrus clementina HOM05D008311 ORTHO05D010526 4.1e-142 508.8 380 68.4
MBI04_g20345_MAGBIO Magnolia biondii HOM05D008311 ORTHO05D010526 8.5e-140 501.1 365 70.4
Gorai.004G256700 Gossypium raimondii HOM05D008311 ORTHO05D010526 1.9e-139 500.0 397 69.8
Manes.09G128000 Manihot esculenta HOM05D008311 ORTHO05D010526 7.2e-139 498.0 431 64.3
Gohir.D08G241300 Gossypium hirsutum HOM05D008311 ORTHO05D010526 9.4e-139 497.7 397 69.3
CDE11G1038 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 8.8e-137 491.1 397 64.0
MD07G1310100 Malus domestica HOM05D008311 ORTHO05D010526 5.9e-133 478.4 403 65.8
Duzib128G1797 Durio zibethinus HOM05D008311 ORTHO05D010526 2.3e-129 466.5 373 67.3
Atru.chr12.1923 Acer truncatum HOM05D008311 ORTHO05D010526 4.4e-128 462.2 427 61.8
Prupe.2G328000 Prunus persica HOM05D008311 ORTHO05D010526 5.7e-128 461.8 351 70.4
Eucgr.A02984 Eucalyptus grandis HOM05D008311 ORTHO05D010526 1.7e-127 460.3 371 64.7
Sed0001927 Sechium edule HOM05D008311 ORTHO05D010526 2.8e-127 459.5 364 65.9
ATR0665G332 Amborella trichopoda HOM05D008311 ORTHO05D010526 7.0e-126 454.9 391 62.1
FAN10G1178 Fragaria x ananassa HOM05D008311 ORTHO05D010526 1.0e-124 451.1 360 65.0
AUR62028199 Chenopodium quinoa HOM05D008311 ORTHO05D010526 7.5e-120 434.9 370 63.0
CDE11G1017 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 8.3e-119 431.4 398 56.5
AUR62002082 Chenopodium quinoa HOM05D008311 ORTHO05D010526 4.1e-118 429.1 371 62.5
CsaV3_2G036620 Cucumis sativus L. HOM05D008311 ORTHO05D010526 2.0e-117 426.8 367 62.4
COL.COLO4_15199 Corchorus olitorius HOM05D008311 ORTHO05D010526 1.0e-116 424.5 377 61.0
ClCG09G017160 Citrullus lanatus HOM05D008311 ORTHO05D010526 2.9e-111 406.4 367 59.9
DCAR_020420 Daucus carota HOM05D008311 ORTHO05D010526 1.6e-109 400.6 367 59.7
Lj3A885T48 Lonicera japonica HOM05D008311 ORTHO05D010526 4.6e-109 399.1 400 58.2
Lsat_1_v5_gn_8_108920 Lactuca sativa HOM05D008311 ORTHO05D010526 3.9e-108 396.0 370 59.7
HPP92_005385 Vanilla planifolia HOM05D008311 ORTHO05D010526 4.3e-107 392.5 382 54.5
THA.LOC104821739 Tarenaya hassleriana HOM05D008311 ORTHO05D010526 7.3e-107 391.7 357 60.5
Zm00001eb429910 Zea mays HOM05D008311 ORTHO05D010526 6.2e-106 388.7 367 56.1
HPP92_009011 Vanilla planifolia HOM05D008311 ORTHO05D010526 1.2e-101 374.4 392 52.3
FAN03G2372 Fragaria x ananassa HOM05D008311 ORTHO05D010526 2.8e-98 363.2 377 54.4
RcHm_v2.0_Chr1g0384481 Rosa chinensis HOM05D008311 ORTHO05D010526 4.4e-96 355.9 287 66.6
EL10Ac3g05056 Beta vulgaris HOM05D008311 ORTHO05D010526 1.3e-95 354.4 365 53.2
Os04g0592500 Oryza sativa ssp. japonica HOM05D008311 ORTHO05D010526 4.6e-85 319.3 357 48.7
MELO3C021863.2 Cucumis melo HOM05D008311 ORTHO05D010526 4.8e-82 309.3 270 61.1
Pp3c16_5410 Physcomitrium patens HOM05D008311 ORTHO05D010526 6.2e-82 308.9 400 42.8
Zm00001eb201380 Zea mays HOM05D008311 ORTHO05D010526 6.7e-76 288.9 304 53.0
AagrBONN_evm.TU.Sc2ySwM_117.4008 Anthoceros agrestis HOM05D008311 ORTHO05D010526 1.8e-65 254.2 330 45.5
Zm00001eb341760 Zea mays HOM05D008311 ORTHO05D010526 2.7e-61 240.4 258 51.2
SEGI_24543 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 1.2e-56 224.9 229 53.7
SEGI_12661 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 3.0e-44 183.7 206 50.5
Zm00001eb072300 Zea mays HOM05D008311 ORTHO05D010526 6.7e-36 156.0 193 48.7
SEGI_19325 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 5.9e-24 116.3 133 51.1
SEGI_38800 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 6.5e-23 112.8 95 58.9
CSS0045669 Camellia sinensis var. sinensis HOM05D008311 ORTHO05D010526 1.2e-21 108.6 79 70.9
Dinv07670 Davidia involucrata HOM05D008311 ORTHO05D183374 8.3e-18 95.9 51 92.2
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 3.5e-16 90.5 111 47.7
Potri.013G079301 Populus trichocarpa HOM05D008311 ORTHO05D010526 3.3e-14 84.0 62 69.4
Zm00001eb207330 Zea mays HOM05D008311 ORTHO05D010526 7.2e-14 82.8 72 56.9
SEGI_08901 Sequoiadendron giganteum HOM05D008311 ORTHO05D384408 3.9e-07 60.5 57 49.1


User provided reference genes

Program Settings