Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29135 Davidia involucrata HOM05D007710 ORTHO05D004022 4.5e-52 208.0 133 100.0
Hma1.2p1_0649F.1_g195210 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 2.0e-12 76.3 91 52.7
Actinidia08760 Actinidia chinensis HOM05D007710 ORTHO05D004022 6.6e-11 71.2 32 96.9
CAN.G1131.30 Capsicum annuum HOM05D007710 ORTHO05D004022 6.6e-11 71.2 32 96.9
Prupe.2G328300 Prunus persica HOM05D007710 ORTHO05D004022 6.6e-11 71.2 32 96.9
RcHm_v2.0_Chr1g0384511 Rosa chinensis HOM05D007710 ORTHO05D004022 6.6e-11 71.2 32 96.9
GSVIVG01024345001 Vitis vinifera HOM05D007710 ORTHO05D004022 6.6e-11 71.2 32 96.9
CiPaw.06G035400 Carya illinoinensis HOM05D007710 ORTHO05D004022 8.6e-11 70.9 31 96.8
arahy.Tifrunner.gnm1.ann1.GY8AT6 Arachis hypogaea HOM05D007710 ORTHO05D004022 1.5e-10 70.1 32 93.8
arahy.Tifrunner.gnm1.ann1.U0IDC3 Arachis hypogaea HOM05D007710 ORTHO05D004022 1.5e-10 70.1 32 93.8
FvH4_7g34150 Fragaria vesca HOM05D007710 ORTHO05D004022 1.5e-10 70.1 32 93.8
FAN03G2015 Fragaria x ananassa HOM05D007710 ORTHO05D004022 1.5e-10 70.1 32 93.8
FAN10G2135 Fragaria x ananassa HOM05D003442 ORTHO05D004005 1.5e-10 70.1 32 93.8
MD01G1238100 Malus domestica HOM05D007710 ORTHO05D004022 1.9e-10 69.7 32 93.8
Nitab4.5_0000021g0800 Nicotiana tabacum HOM05D007710 ORTHO05D004022 1.9e-10 69.7 32 93.8
Nitab4.5_0004530g0090 Nicotiana tabacum HOM05D007710 ORTHO05D004022 1.9e-10 69.7 32 93.8
HanXRQChr04g0105361 Helianthus annuus HOM05D007710 ORTHO05D004022 2.5e-10 69.3 31 93.5
Haze_00383 Corylus avellana HOM05D007710 ORTHO05D004022 3.3e-10 68.9 32 93.8
Duzib128G0150 Durio zibethinus HOM05D007710 ORTHO05D004022 3.3e-10 68.9 32 93.8
MD01G1238400 Malus domestica HOM05D007710 ORTHO05D004022 3.3e-10 68.9 32 93.8
CSS0005120 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 4.3e-10 68.6 32 90.6
CSS0038916 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 4.3e-10 68.6 32 90.6
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 4.3e-10 68.6 31 93.5
Glyma.11G108600 Glycine max HOM05D007710 ORTHO05D004022 4.3e-10 68.6 32 90.6
Glyma.12G016700 Glycine max HOM05D007710 ORTHO05D004022 4.3e-10 68.6 32 90.6
Lj3g0011322 Lotus japonicus HOM05D007710 ORTHO05D004022 4.3e-10 68.6 32 90.6
Potri.013G078866 Populus trichocarpa HOM05D007710 ORTHO05D004022 4.3e-10 68.6 30 96.7
Peaxi162Scf00516g00641 Petunia axillaris HOM05D007710 ORTHO05D004022 5.6e-10 68.2 32 90.6
Phvul.011G019000 Phaseolus vulgaris HOM05D007710 ORTHO05D004022 5.6e-10 68.2 32 90.6
TWI32G0404 Tripterygium wilfordii HOM05D007710 ORTHO05D004022 5.6e-10 68.2 32 90.6
COL.COLO4_15187 Corchorus olitorius HOM05D007710 ORTHO05D004022 9.5e-10 67.4 32 90.6
Solyc03g097200.3 Solanum lycopersicum HOM05D007710 ORTHO05D004022 9.5e-10 67.4 32 87.5
Sopen03g027960 Solanum pennellii HOM05D007710 ORTHO05D004022 9.5e-10 67.4 32 87.5
PGSC0003DMG400003164 Solanum tuberosum HOM05D007710 ORTHO05D004022 9.5e-10 67.4 32 87.5
PGSC0003DMG402026486 Solanum tuberosum HOM05D007710 ORTHO05D004022 9.5e-10 67.4 32 87.5
Mapoly0120s0048 Marchantia polymorpha HOM05D007710 ORTHO05D004022 1.2e-09 67.0 31 87.1
TPR.G19627 Trifolium pratense HOM05D007710 ORTHO05D004022 1.2e-09 67.0 32 87.5
Atru.chr12.1914 Acer truncatum HOM05D007710 ORTHO05D004022 1.6e-09 66.6 32 87.5
DCAR_009023 Daucus carota HOM05D007710 ORTHO05D004022 1.6e-09 66.6 32 87.5
Thecc.05G219200 Theobroma cacao HOM05D007710 ORTHO05D004022 1.6e-09 66.6 32 90.6
ECA233G0318 Erigeron canadensis HOM05D007710 ORTHO05D004022 2.1e-09 66.2 30 90.0
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 2.1e-09 66.2 32 90.6
Gohir.A13G101700 Gossypium hirsutum HOM05D007710 ORTHO05D004022 2.1e-09 66.2 32 90.6
Hma1.2p1_0649F.1_g195220 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 2.1e-09 66.2 31 90.3
Medtr4g478210 Medicago truncatula HOM05D007710 ORTHO05D004022 2.1e-09 66.2 32 87.5
Cc02_g00160 Coffea canephora HOM05D007710 ORTHO05D004022 2.8e-09 65.9 32 84.4
Manes.08G064400 Manihot esculenta HOM05D007710 ORTHO05D004022 2.8e-09 65.9 30 93.3
TAR375G0377 Trochodendron aralioides HOM05D007710 ORTHO05D004022 2.8e-09 65.9 30 90.0
Ciclev10033194m.g Citrus clementina HOM05D007710 ORTHO05D004022 3.6e-09 65.5 32 87.5
Lsat_1_v5_gn_2_60801 Lactuca sativa HOM05D007710 ORTHO05D004022 3.6e-09 65.5 30 90.0
MD06G1024400 Malus domestica HOM05D007710 ORTHO05D004022 3.6e-09 65.5 32 87.5
Rhsim03G0223400 Rhododendron simsii HOM05D007710 ORTHO05D004022 6.1e-09 64.7 32 84.4
Sed0013213 Sechium edule HOM05D007710 ORTHO05D004022 1.0e-08 63.9 30 90.0
MELO3C021857.2 Cucumis melo HOM05D007710 ORTHO05D004022 1.4e-08 63.5 30 90.0
Os03g0857750 Oryza sativa ssp. japonica HOM05D007710 ORTHO05D004022 1.4e-08 63.5 30 83.3
SalBow2G0781 Salvia bowleyana HOM05D007710 ORTHO05D004022 1.8e-08 63.2 32 81.2
Aqoxy3G02299 Aquilegia oxysepala HOM05D007710 ORTHO05D004022 2.3e-08 62.8 30 83.3
Hund09805 Selenicereus undatus HOM05D007710 ORTHO05D004022 2.3e-08 62.8 32 78.1
Psat7g170120 Pisum sativum HOM05D007710 ORTHO05D004022 3.1e-08 62.4 32 81.2
CsaV3_2G036650 Cucumis sativus L. HOM05D007710 ORTHO05D004022 4.0e-08 62.0 30 86.7
Manes.09G128500 Manihot esculenta HOM05D007710 ORTHO05D004022 5.2e-08 61.6 28 89.3
ATR0057G097 Amborella trichopoda HOM05D007710 ORTHO05D004022 6.8e-08 61.2 30 83.3
PSO063G4155 Papaver somniferum HOM05D007710 ORTHO05D004022 1.5e-07 60.1 30 83.3
PSO782G0287 Papaver somniferum HOM05D007710 ORTHO05D004022 1.5e-07 60.1 30 83.3
Aa31LG2G2200 Aethionema arabicum HOM05D007710 ORTHO05D004022 2.0e-07 59.7 32 78.1
THA.LOC104805715 Tarenaya hassleriana HOM05D007710 ORTHO05D004022 2.6e-07 59.3 30 80.0
Migut.F00935 Erythranthe guttata HOM05D007710 ORTHO05D004022 3.4e-07 58.9 32 78.1
BcaB03g15335 Brassica carinata HOM05D007710 ORTHO05D004022 4.4e-07 58.5 30 80.0
A07p32740 Brassica napus HOM05D007710 ORTHO05D004022 4.4e-07 58.5 30 80.0
BolC6t38987H Brassica oleracea HOM05D007710 ORTHO05D004022 4.4e-07 58.5 30 80.0
BraA07t30900Z Brassica rapa HOM05D007710 ORTHO05D004022 4.4e-07 58.5 30 80.0
CARHR056450 Cardamine hirsuta HOM05D007710 ORTHO05D004022 4.4e-07 58.5 30 80.0
CARHR057330 Cardamine hirsuta HOM05D007710 ORTHO05D004022 4.4e-07 58.5 30 80.0
Pp3c5_4790 Physcomitrium patens HOM05D007710 ORTHO05D004022 4.4e-07 58.5 30 76.7
Sp5g19360 Schrenkiella parvula HOM05D007710 ORTHO05D004022 4.4e-07 58.5 30 80.0
unitig_747.g21335 Utricularia gibba HOM05D007710 ORTHO05D004022 4.4e-07 58.5 32 78.1
HPP92_014617 Vanilla planifolia HOM05D007710 ORTHO05D004022 4.4e-07 58.5 32 75.0
PGR042G1372 Punica granatum HOM05D007710 ORTHO05D004022 5.8e-07 58.2 30 76.7
AL2G19620 Arabidopsis lyrata HOM05D007710 ORTHO05D004022 9.8e-07 57.4 30 76.7
AT1G65000 Arabidopsis thaliana HOM05D007710 ORTHO05D004022 9.8e-07 57.4 30 76.7
C06p38950 Brassica napus HOM05D007710 ORTHO05D004022 9.8e-07 57.4 30 76.7
EL10Ac3g05053 Beta vulgaris HOM05D007710 ORTHO05D004022 1.7e-06 56.6 32 71.9
ClCG09G017200 Citrullus lanatus HOM05D007710 ORTHO05D004022 3.7e-06 55.5 26 88.5
Nn6g33555 Nelumbo nucifera HOM05D007710 ORTHO05D004022 3.7e-06 55.5 30 73.3
Ah.04g156350 Amaranthus hybridus HOM05D007710 ORTHO05D004022 4.9e-06 55.1 32 71.9
AUR62028202 Chenopodium quinoa HOM05D007710 ORTHO05D004022 8.3e-06 54.3 32 68.8
SMO347G0449 Selaginella moellendorffii HOM05D007710 ORTHO05D004022 8.3e-06 54.3 30 73.3


User provided reference genes

Program Settings