Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29053 Davidia involucrata HOM05D061432 ORTHO05D000008 2.2e-130 469.5 355 100.0
CSS0040834 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 3.1e-15 87.0 77 57.1
PGSC0003DMG400008588 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.3e-13 81.6 77 58.4
Rhsim05G0016700 Rhododendron simsii HOM05D000009 ORTHO05D000008 1.1e-12 78.6 73 57.5
Dinv29051 Davidia involucrata HOM05D061432 ORTHO05D000008 4.2e-12 76.6 38 94.7
Cc08_g04240 Coffea canephora HOM05D000009 ORTHO05D012472 7.1e-12 75.9 74 58.1
vmacro23306 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 2.7e-11 73.9 70 55.7
Rhsim05G0073100 Rhododendron simsii HOM05D001155 ORTHO05D001080 7.9e-11 72.4 79 53.2
Ciclev10027705m.g Citrus clementina HOM05D000009 ORTHO05D000008 3.9e-10 70.1 74 51.4
PGSC0003DMG400029590 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.1e-10 69.7 73 52.1
CSS0043086 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 6.7e-10 69.3 55 65.5
Medtr5g072140 Medicago truncatula HOM05D000009 ORTHO05D000008 2.5e-09 67.4 77 50.6
CSS0029174 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 3.3e-09 67.0 71 53.5
Solyc09g059840.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.3e-09 67.0 74 52.7
Medtr5g071780 Medicago truncatula HOM05D000009 ORTHO05D000008 4.3e-09 66.6 75 48.0
PGSC0003DMG401030883 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.3e-09 66.6 93 41.9
Solyc09g064600.3 Solanum lycopersicum HOM05D000009 ORTHO05D012364 9.6e-09 65.5 71 50.7
Medtr5g071823 Medicago truncatula HOM05D000009 ORTHO05D000008 1.3e-08 65.1 77 45.5
Medtr5g071850 Medicago truncatula HOM05D000009 ORTHO05D000008 1.3e-08 65.1 77 45.5
Sopen08g024300 Solanum pennellii HOM05D000009 ORTHO05D000008 2.8e-08 63.9 73 49.3
Solyc08g075640.4 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.7e-08 63.5 72 48.6
TPR.G10597 Trifolium pratense HOM05D000009 ORTHO05D000008 3.7e-08 63.5 74 47.3
Medtr0256s0050 Medicago truncatula HOM05D000009 ORTHO05D000008 8.1e-08 62.4 70 47.1
Medtr0133s0020 Medicago truncatula HOM05D000009 ORTHO05D000008 1.4e-07 61.6 70 44.3
Medtr1g022380 Medicago truncatula HOM05D000009 ORTHO05D000008 1.4e-07 61.6 75 44.0
Medtr3g086070 Medicago truncatula HOM05D000009 ORTHO05D000008 1.4e-07 61.6 70 48.6
Medtr6g046450 Medicago truncatula HOM05D000009 ORTHO05D000008 1.4e-07 61.6 75 41.3
Phvul.002G129700 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.4e-07 61.6 74 45.9
TPR.G10881 Trifolium pratense HOM05D000009 ORTHO05D000008 1.4e-07 61.6 74 47.3
TPR.G40093 Trifolium pratense HOM05D000009 ORTHO05D000008 1.8e-07 61.2 70 47.1
Medtr3g023320 Medicago truncatula HOM05D000009 ORTHO05D000008 2.4e-07 60.8 67 46.3
Medtr6g046440 Medicago truncatula HOM05D000009 ORTHO05D000008 3.1e-07 60.5 70 48.6
Medtr0230s0010 Medicago truncatula HOM05D000009 ORTHO05D000008 4.0e-07 60.1 65 49.2
TPR.G13493 Trifolium pratense HOM05D000009 ORTHO05D000008 4.0e-07 60.1 77 44.2
TPR.G20861 Trifolium pratense HOM05D000009 ORTHO05D000008 6.9e-07 59.3 74 47.3
TPR.G24040 Trifolium pratense HOM05D000009 ORTHO05D000008 6.9e-07 59.3 74 47.3
arahy.Tifrunner.gnm1.ann1.1U71WU Arachis hypogaea HOM05D000009 ORTHO05D000008 1.2e-06 58.5 75 45.3
arahy.Tifrunner.gnm1.ann1.UIPX5Z Arachis hypogaea HOM05D000009 ORTHO05D000008 1.2e-06 58.5 75 45.3
Medtr5g040770 Medicago truncatula HOM05D000009 ORTHO05D000008 1.2e-06 58.5 74 41.9
PGSC0003DMG400039970 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.5e-06 58.2 68 48.5
Cc00_g27700 Coffea canephora HOM05D000009 ORTHO05D000008 2.0e-06 57.8 74 45.9
Medtr5g037450 Medicago truncatula HOM05D000009 ORTHO05D000008 2.0e-06 57.8 72 43.1
Medtr5g071220 Medicago truncatula HOM05D000009 ORTHO05D000008 2.0e-06 57.8 77 40.3
QL02p065249 Quercus lobata HOM05D000009 ORTHO05D000008 2.6e-06 57.4 74 43.2
arahy.Tifrunner.gnm1.ann1.8HC6C5 Arachis hypogaea HOM05D000009 ORTHO05D000008 3.4e-06 57.0 67 46.3
arahy.Tifrunner.gnm1.ann1.VZQ2V7 Arachis hypogaea HOM05D000009 ORTHO05D000008 3.4e-06 57.0 67 46.3
Medtr0144s0010 Medicago truncatula HOM05D000009 ORTHO05D000008 4.5e-06 56.6 72 45.8
Psat2g111600 Pisum sativum HOM05D000009 ORTHO05D016330 4.5e-06 56.6 77 40.3
TPR.G24032 Trifolium pratense HOM05D000009 ORTHO05D000008 5.8e-06 56.2 76 46.1
Medtr4g126000 Medicago truncatula HOM05D000009 ORTHO05D000008 1.0e-05 55.5 77 44.2
Phvul.002G129900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.0e-05 55.5 74 44.6
TPR.G34427 Trifolium pratense HOM05D000009 ORTHO05D012364 1.0e-05 55.5 76 44.7


User provided reference genes

Program Settings